RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 ASTN1O14525 1302 aa17.26■□□□□ 0.35
SNX13-204ENST00000444712 SLU7O95391 586 aaKnown RBP17.25■□□□□ 0.35
SNX13-204ENST00000444712 YBX3P16989 372 aaKnown RBP eCLIP17.25■□□□□ 0.35
SNX13-204ENST00000444712 HOXD13P35453 343 aa17.25■□□□□ 0.35
SNX13-204ENST00000444712 KLK7P49862 253 aa17.25■□□□□ 0.35
SNX13-204ENST00000444712 LBX2Q6XYB7 198 aa17.25■□□□□ 0.35
SNX13-204ENST00000444712 ZNF720Q7Z2F6 126 aa17.25■□□□□ 0.35
SNX13-204ENST00000444712 MKNK1Q9BUB5 465 aa17.25■□□□□ 0.35
SNX13-204ENST00000444712 PLAGL2Q9UPG8 496 aa17.25■□□□□ 0.35
SNX13-204ENST00000444712 A0A0G2JLL6 359 aaPredicted RBP17.25■□□□□ 0.35
SNX13-204ENST00000444712 ZBTB39O15060 712 aa17.25■□□□□ 0.35
SNX13-204ENST00000444712 HIP1RO75146 1068 aa17.25■□□□□ 0.35
SNX13-204ENST00000444712 YWHABP31946 246 aaKnown RBP17.25■□□□□ 0.35
SNX13-204ENST00000444712 RARRES1P49788 294 aa17.25■□□□□ 0.35
SNX13-204ENST00000444712 WDR59Q6PJI9 974 aa17.25■□□□□ 0.35
SNX13-204ENST00000444712 ZNF662Q6ZS27 426 aa17.25■□□□□ 0.35
SNX13-204ENST00000444712 CACNA2D4Q7Z3S7 1137 aa17.25■□□□□ 0.35
SNX13-204ENST00000444712 PRRT2Q7Z6L0 340 aaPredicted RBP17.25■□□□□ 0.35
SNX13-204ENST00000444712 RIOX2Q8IUF8 465 aa17.25■□□□□ 0.35
SNX13-204ENST00000444712 ERO1AQ96HE7 468 aa17.25■□□□□ 0.35
SNX13-204ENST00000444712 DRC1Q96MC2 740 aa17.25■□□□□ 0.35
SNX13-204ENST00000444712 CHP1Q99653 195 aa17.25■□□□□ 0.35
SNX13-204ENST00000444712 MOV10L1Q9BXT6 1211 aaKnown RBP17.25■□□□□ 0.35
SNX13-204ENST00000444712 CEP72Q9P209 647 aa17.25■□□□□ 0.35
SNX13-204ENST00000444712 PCDHA10Q9Y5I2 948 aa17.25■□□□□ 0.35
SNX13-204ENST00000444712 XRCC5P13010 732 aaKnown RBP17.24■□□□□ 0.35
SNX13-204ENST00000444712 COPB2P35606 906 aa17.24■□□□□ 0.35
SNX13-204ENST00000444712 MYBPC2Q14324 1141 aa17.24■□□□□ 0.35
SNX13-204ENST00000444712 MTERF4Q7Z6M4 381 aaKnown RBP17.24■□□□□ 0.35
SNX13-204ENST00000444712 ATP6V0A1Q93050 837 aa17.24■□□□□ 0.35
SNX13-204ENST00000444712 FAM207AQ9NSI2 230 aaPredicted RBP17.24■□□□□ 0.35
SNX13-204ENST00000444712 CGNQ9P2M7 1197 aaKnown RBP17.24■□□□□ 0.35
SNX13-204ENST00000444712 SPDYE5A6NIY4 337 aa17.23■□□□□ 0.35
SNX13-204ENST00000444712 SFI1A8K8P3 1242 aa17.23■□□□□ 0.35
SNX13-204ENST00000444712 EIF3CLB5ME19 914 aaKnown RBP17.23■□□□□ 0.35
SNX13-204ENST00000444712 ATP9AO75110 1047 aa17.23■□□□□ 0.35
SNX13-204ENST00000444712 NMT1P30419 496 aaKnown RBP17.23■□□□□ 0.35
SNX13-204ENST00000444712 EPHX2P34913 555 aa17.23■□□□□ 0.35
SNX13-204ENST00000444712 IRX3P78415 501 aaPredicted RBP17.23■□□□□ 0.35
SNX13-204ENST00000444712 GADL1Q6ZQY3 521 aa17.23■□□□□ 0.35
SNX13-204ENST00000444712 OTUD6AQ7L8S5 288 aa17.23■□□□□ 0.35
SNX13-204ENST00000444712 ACRBPQ8NEB7 543 aa17.23■□□□□ 0.35
SNX13-204ENST00000444712 SYN2Q92777 582 aaPredicted RBP17.23■□□□□ 0.35
SNX13-204ENST00000444712 CDCA5Q96FF9 252 aa17.23■□□□□ 0.35
SNX13-204ENST00000444712 FIZ1Q96SL8 496 aa17.23■□□□□ 0.35
SNX13-204ENST00000444712 EIF3CQ99613 913 aaKnown RBP17.23■□□□□ 0.35
SNX13-204ENST00000444712 HAUS4Q9H6D7 363 aa17.23■□□□□ 0.35
SNX13-204ENST00000444712 TMEM206Q9H813 350 aa17.23■□□□□ 0.35
SNX13-204ENST00000444712 LZTFL1Q9NQ48 299 aa17.23■□□□□ 0.35
SNX13-204ENST00000444712 ZMYM2Q9UBW7 1377 aa17.23■□□□□ 0.35
SNX13-204ENST00000444712 NKRFO15226 690 aaKnown RBP eCLIP17.23■□□□□ 0.35
SNX13-204ENST00000444712 AFPP02771 609 aaKnown RBP17.23■□□□□ 0.35
SNX13-204ENST00000444712 PSAPP07602 524 aa17.23■□□□□ 0.35
SNX13-204ENST00000444712 KCNH2Q12809 1159 aa17.23■□□□□ 0.35
SNX13-204ENST00000444712 MAPK7Q13164 816 aa17.23■□□□□ 0.35
SNX13-204ENST00000444712 TUBB2AQ13885 445 aa17.23■□□□□ 0.35
SNX13-204ENST00000444712 TREML2Q5T2D2 321 aa17.23■□□□□ 0.35
SNX13-204ENST00000444712 ANKRD35Q8N283 1001 aa17.23■□□□□ 0.35
SNX13-204ENST00000444712 TXLNBQ8N3L3 684 aa17.23■□□□□ 0.35
SNX13-204ENST00000444712 TUBB2BQ9BVA1 445 aa17.23■□□□□ 0.35
SNX13-204ENST00000444712 GBP3Q9H0R5 595 aa17.23■□□□□ 0.35
SNX13-204ENST00000444712 NHEJ1Q9H9Q4 299 aaPredicted RBP17.23■□□□□ 0.35
SNX13-204ENST00000444712 MYH9P35579 1960 aaKnown RBP17.22■□□□□ 0.35
SNX13-204ENST00000444712 KCNA2P16389 499 aa17.22■□□□□ 0.35
SNX13-204ENST00000444712 PSMC2P35998 433 aaKnown RBP17.22■□□□□ 0.35
SNX13-204ENST00000444712 SNRPFP62306 86 aaKnown RBP17.22■□□□□ 0.35
SNX13-204ENST00000444712 KCNMA1Q12791 1236 aa17.22■□□□□ 0.35
SNX13-204ENST00000444712 PPIL2Q13356 520 aa17.22■□□□□ 0.35
SNX13-204ENST00000444712 STXBP2Q15833 593 aa17.22■□□□□ 0.35
SNX13-204ENST00000444712 EHBP1Q8NDI1 1231 aa17.22■□□□□ 0.35
SNX13-204ENST00000444712 PURBQ96QR8 312 aaKnown RBP17.22■□□□□ 0.35
SNX13-204ENST00000444712 ELP3Q9H9T3 547 aa17.22■□□□□ 0.35
SNX13-204ENST00000444712 DOCK5Q9H7D0 1870 aa17.22■□□□□ 0.35
SNX13-204ENST00000444712 IRF6O14896 467 aa17.21■□□□□ 0.35
SNX13-204ENST00000444712 TGFB1I1O43294 461 aa17.21■□□□□ 0.35
SNX13-204ENST00000444712 PPP1R37O75864 691 aa17.21■□□□□ 0.35
SNX13-204ENST00000444712 CCNE2O96020 404 aa17.21■□□□□ 0.35
SNX13-204ENST00000444712 PLS3P13797 630 aa17.21■□□□□ 0.35
SNX13-204ENST00000444712 TTLL12Q14166 644 aaPredicted RBP17.21■□□□□ 0.35
SNX13-204ENST00000444712 PDXDC1Q6P996 788 aa17.21■□□□□ 0.35
SNX13-204ENST00000444712 ARMC9Q7Z3E5 817 aa17.21■□□□□ 0.35
SNX13-204ENST00000444712 SLC9A9Q8IVB4 645 aa17.21■□□□□ 0.35
SNX13-204ENST00000444712 SMCR8Q8TEV9 937 aaPredicted RBP17.21■□□□□ 0.35
SNX13-204ENST00000444712 CCDC42Q96M95 316 aa17.21■□□□□ 0.35
SNX13-204ENST00000444712 MPHOSPH6Q99547 160 aaKnown RBP17.21■□□□□ 0.35
SNX13-204ENST00000444712 STRA6Q9BX79 667 aa17.21■□□□□ 0.35
SNX13-204ENST00000444712 ST6GALNAC4Q9H4F1 302 aa17.21■□□□□ 0.35
SNX13-204ENST00000444712 JPH1Q9HDC5 661 aaPredicted RBP17.21■□□□□ 0.35
SNX13-204ENST00000444712 SLC9A2Q9UBY0 812 aa17.21■□□□□ 0.35
SNX13-204ENST00000444712 KCNH4Q9UQ05 1017 aa17.21■□□□□ 0.35
SNX13-204ENST00000444712 FRMD4BQ9Y2L6 1034 aa17.21■□□□□ 0.35
SNX13-204ENST00000444712 GTPBP10A4D1E9 387 aaKnown RBP17.21■□□□□ 0.35
SNX13-204ENST00000444712 IQCA1LA6NCM1 817 aa17.21■□□□□ 0.35
SNX13-204ENST00000444712 SPATA31C2B4DYI2 1134 aa17.21■□□□□ 0.35
SNX13-204ENST00000444712 K7ENM7 598 aa17.21■□□□□ 0.35
SNX13-204ENST00000444712 USO1O60763 962 aaKnown RBP17.21■□□□□ 0.35
SNX13-204ENST00000444712 EIF3JO75822 258 aaKnown RBP17.21■□□□□ 0.35
SNX13-204ENST00000444712 URI1O94763 535 aaPredicted RBP17.21■□□□□ 0.35
SNX13-204ENST00000444712 SLC25A27O95847 323 aa17.21■□□□□ 0.35
SNX13-204ENST00000444712 ICAM3P32942 547 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms