RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 FBXO47Q5MNV8 452 aa24.58■■□□□ 1.53
TRAF4-205ENST00000444415 NEMFO60524 1076 aa24.58■■□□□ 1.52
TRAF4-205ENST00000444415 GHRP10912 638 aa24.58■■□□□ 1.52
TRAF4-205ENST00000444415 U2AF2P26368 475 aaKnown RBP eCLIP24.58■■□□□ 1.521e-6■□□□□ 8.6
TRAF4-205ENST00000444415 GJB2P29033 226 aa24.58■■□□□ 1.52
TRAF4-205ENST00000444415 ZNF697Q5TEC3 545 aa24.58■■□□□ 1.52
TRAF4-205ENST00000444415 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.58■■□□□ 1.521e-16■■■■□ 20.6
TRAF4-205ENST00000444415 NOSTRINQ8IVI9 506 aa24.58■■□□□ 1.52
TRAF4-205ENST00000444415 TIFAQ96CG3 184 aa24.58■■□□□ 1.52
TRAF4-205ENST00000444415 FAM167AQ96KS9 214 aa24.58■■□□□ 1.52
TRAF4-205ENST00000444415 SLC9A7Q96T83 725 aa24.58■■□□□ 1.52
TRAF4-205ENST00000444415 AGO3Q9H9G7 860 aaKnown RBP24.58■■□□□ 1.52
TRAF4-205ENST00000444415 ARID2Q68CP9 1835 aa24.57■■□□□ 1.52
TRAF4-205ENST00000444415 ABHD14A-ACY1A0A1B0GW23 586 aa24.57■■□□□ 1.52
TRAF4-205ENST00000444415 ARHGEF15O94989 841 aa24.57■■□□□ 1.52
TRAF4-205ENST00000444415 CUL4AQ13619 759 aa24.57■■□□□ 1.52
TRAF4-205ENST00000444415 SH2D3AQ9BRG2 576 aa24.57■■□□□ 1.52
TRAF4-205ENST00000444415 TMEM265A0A087WTH1 108 aa24.56■■□□□ 1.52
TRAF4-205ENST00000444415 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.56■■□□□ 1.52
TRAF4-205ENST00000444415 ATP2B1P20020 1258 aa24.56■■□□□ 1.52
TRAF4-205ENST00000444415 TOB1P50616 345 aaPredicted RBP24.56■■□□□ 1.52
TRAF4-205ENST00000444415 NBR1Q14596 966 aa24.56■■□□□ 1.52
TRAF4-205ENST00000444415 CALCRLQ16602 461 aa24.56■■□□□ 1.52
TRAF4-205ENST00000444415 RSPH3Q86UC2 560 aa24.56■■□□□ 1.52
TRAF4-205ENST00000444415 HERC6Q8IVU3 1022 aa24.56■■□□□ 1.52
TRAF4-205ENST00000444415 SLFN12Q8IYM2 578 aa24.56■■□□□ 1.52
TRAF4-205ENST00000444415 PHOSPHO2Q8TCD6 241 aa24.56■■□□□ 1.52
TRAF4-205ENST00000444415 IFIH1Q9BYX4 1025 aaKnown RBP24.56■■□□□ 1.52
TRAF4-205ENST00000444415 NKX2-4Q9H2Z4 354 aa24.56■■□□□ 1.52
TRAF4-205ENST00000444415 CDHR5Q9HBB8 845 aa24.56■■□□□ 1.52
TRAF4-205ENST00000444415 KDM3AQ9Y4C1 1321 aa24.55■■□□□ 1.52
TRAF4-205ENST00000444415 MCM7P33993 719 aa24.55■■□□□ 1.52
TRAF4-205ENST00000444415 IKBKEQ14164 716 aa24.55■■□□□ 1.52
TRAF4-205ENST00000444415 ANO5Q75V66 913 aa24.55■■□□□ 1.52
TRAF4-205ENST00000444415 NIFKQ9BYG3 293 aaKnown RBP24.55■■□□□ 1.52
TRAF4-205ENST00000444415 RGL1Q9NZL6 768 aa24.55■■□□□ 1.52
TRAF4-205ENST00000444415 TRPV2Q9Y5S1 764 aa24.55■■□□□ 1.52
TRAF4-205ENST00000444415 CLCN3P51790 818 aa24.54■■□□□ 1.52
TRAF4-205ENST00000444415 EPHA7Q15375 998 aa24.54■■□□□ 1.52
TRAF4-205ENST00000444415 XKR3Q5GH77 459 aa24.54■■□□□ 1.52
TRAF4-205ENST00000444415 NCAPH2Q6IBW4 605 aa24.54■■□□□ 1.52
TRAF4-205ENST00000444415 TMEM40Q8WWA1 233 aa24.54■■□□□ 1.52
TRAF4-205ENST00000444415 CEP131Q9UPN4 1083 aa24.54■■□□□ 1.52
TRAF4-205ENST00000444415 PCDHA11Q9Y5I1 949 aa24.54■■□□□ 1.52
TRAF4-205ENST00000444415 RPLP2P05387 115 aaKnown RBP24.53■■□□□ 1.52
TRAF4-205ENST00000444415 PSMC5P62195 406 aa24.53■■□□□ 1.52
TRAF4-205ENST00000444415 DRP2Q13474 957 aa24.53■■□□□ 1.52
TRAF4-205ENST00000444415 GRIN2CQ14957 1233 aa24.53■■□□□ 1.52
TRAF4-205ENST00000444415 RAB30Q15771 203 aa24.53■■□□□ 1.52
TRAF4-205ENST00000444415 LRRC71Q8N4P6 559 aa24.53■■□□□ 1.52
TRAF4-205ENST00000444415 LINC01599Q8WXQ3 324 aa24.53■■□□□ 1.52
TRAF4-205ENST00000444415 SEPT8Q92599 483 aa24.53■■□□□ 1.52
TRAF4-205ENST00000444415 CELF4Q9BZC1 486 aaKnown RBP24.53■■□□□ 1.52
TRAF4-205ENST00000444415 ZNF576Q9H609 170 aa24.53■■□□□ 1.52
TRAF4-205ENST00000444415 TTC12Q9H892 705 aaPredicted RBP24.53■■□□□ 1.52
TRAF4-205ENST00000444415 NRBP2Q9NSY0 501 aa24.53■■□□□ 1.52
TRAF4-205ENST00000444415 SEPT9Q9UHD8 586 aaPredicted RBP24.53■■□□□ 1.52
TRAF4-205ENST00000444415 TTC3P53804 2025 aa24.53■■□□□ 1.52
TRAF4-205ENST00000444415 VTNP04004 478 aa24.52■■□□□ 1.52
TRAF4-205ENST00000444415 CD52P31358 61 aa24.52■■□□□ 1.52
TRAF4-205ENST00000444415 QARSP47897 775 aaKnown RBP24.52■■□□□ 1.52
TRAF4-205ENST00000444415 KCNJ6P48051 423 aa24.52■■□□□ 1.52
TRAF4-205ENST00000444415 ZNF174Q15697 407 aa24.52■■□□□ 1.52
TRAF4-205ENST00000444415 IER5Q5VY09 327 aa24.52■■□□□ 1.52
TRAF4-205ENST00000444415 PLA2G4FQ68DD2 849 aa24.52■■□□□ 1.52
TRAF4-205ENST00000444415 TSHZ1Q6ZSZ6 1077 aa24.52■■□□□ 1.52
TRAF4-205ENST00000444415 SPRED2Q7Z698 418 aa24.52■■□□□ 1.52
TRAF4-205ENST00000444415 NME8Q8N427 588 aa24.52■■□□□ 1.52
TRAF4-205ENST00000444415 C4orf32Q8N8J7 132 aa24.52■■□□□ 1.52
TRAF4-205ENST00000444415 ZNF579Q8NAF0 562 aaKnown RBP24.52■■□□□ 1.52
TRAF4-205ENST00000444415 DYDC2Q96IM9 177 aa24.52■■□□□ 1.52
TRAF4-205ENST00000444415 LXNQ9BS40 222 aa24.52■■□□□ 1.52
TRAF4-205ENST00000444415 PCDHA12Q9UN75 941 aa24.52■■□□□ 1.52
TRAF4-205ENST00000444415 COL4A6Q14031 1691 aa24.52■■□□□ 1.52
TRAF4-205ENST00000444415 LCHNA4D1U4 455 aa24.51■■□□□ 1.51
TRAF4-205ENST00000444415 POTEMA6NI47 508 aa24.51■■□□□ 1.51
TRAF4-205ENST00000444415 EFCAB14O75071 495 aa24.51■■□□□ 1.51
TRAF4-205ENST00000444415 GPR32O75388 356 aa24.51■■□□□ 1.51
TRAF4-205ENST00000444415 GJB5O95377 273 aa24.51■■□□□ 1.51
TRAF4-205ENST00000444415 BAG4O95429 457 aaKnown RBP24.51■■□□□ 1.51
TRAF4-205ENST00000444415 P4HBP07237 508 aaKnown RBP24.51■■□□□ 1.51
TRAF4-205ENST00000444415 CA3P07451 260 aa24.51■■□□□ 1.51
TRAF4-205ENST00000444415 TXKP42681 527 aa24.51■■□□□ 1.51
TRAF4-205ENST00000444415 MTERF2Q49AM1 385 aa24.51■■□□□ 1.51
TRAF4-205ENST00000444415 TTC38Q5R3I4 469 aa24.51■■□□□ 1.51
TRAF4-205ENST00000444415 METTL13Q8N6R0 699 aa24.51■■□□□ 1.51
TRAF4-205ENST00000444415 PPP1R16BQ96T49 567 aa24.51■■□□□ 1.51
TRAF4-205ENST00000444415 CDX2Q99626 313 aaPredicted RBP24.51■■□□□ 1.51
TRAF4-205ENST00000444415 MSRAQ9UJ68 235 aa24.51■■□□□ 1.51
TRAF4-205ENST00000444415 IGKV6-21A0A0C4DH24 114 aa24.51■■□□□ 1.51
TRAF4-205ENST00000444415 ZBTB39O15060 712 aa24.51■■□□□ 1.51
TRAF4-205ENST00000444415 MAGEB2O15479 319 aa24.51■■□□□ 1.51
TRAF4-205ENST00000444415 MARCH6O60337 910 aa24.51■■□□□ 1.51
TRAF4-205ENST00000444415 SLITRK3O94933 977 aa24.51■■□□□ 1.51
TRAF4-205ENST00000444415 CYP4A11Q02928 519 aa24.51■■□□□ 1.51
TRAF4-205ENST00000444415 CTTNQ14247 550 aaKnown RBP24.51■■□□□ 1.51
TRAF4-205ENST00000444415 EFCAB12Q6NXP0 572 aa24.51■■□□□ 1.51
TRAF4-205ENST00000444415 APBB2Q92870 758 aa24.51■■□□□ 1.51
TRAF4-205ENST00000444415 HSD17B14Q9BPX1 270 aa24.51■■□□□ 1.51
TRAF4-205ENST00000444415 SMC3Q9UQE7 1217 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms