RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 COL23A1Q86Y22 540 aaPredicted RBP18.28■□□□□ 0.52
PMS1-213ENST00000441310 CLEC10AQ8IUN9 316 aa18.28■□□□□ 0.52
PMS1-213ENST00000441310 KLHL29Q96CT2 875 aa18.28■□□□□ 0.52
PMS1-213ENST00000441310 ERGIC2Q96RQ1 377 aa18.28■□□□□ 0.52
PMS1-213ENST00000441310 DDX47Q9H0S4 455 aaKnown RBP18.28■□□□□ 0.52
PMS1-213ENST00000441310 PP2D1A8MPX8 630 aa18.27■□□□□ 0.52
PMS1-213ENST00000441310 PJA2O43164 708 aa18.27■□□□□ 0.52
PMS1-213ENST00000441310 SART1O43290 800 aaKnown RBP18.27■□□□□ 0.52
PMS1-213ENST00000441310 PDHA1P08559 390 aa18.27■□□□□ 0.52
PMS1-213ENST00000441310 ALADP13716 330 aa18.27■□□□□ 0.52
PMS1-213ENST00000441310 RASA1P20936 1047 aa18.27■□□□□ 0.52
PMS1-213ENST00000441310 SLC27A3Q5K4L6 730 aa18.27■□□□□ 0.52
PMS1-213ENST00000441310 NAF1Q96HR8 494 aaKnown RBP18.27■□□□□ 0.52
PMS1-213ENST00000441310 TMEM47Q9BQJ4 181 aa18.27■□□□□ 0.52
PMS1-213ENST00000441310 GRID2IPA4D2P6 1211 aa18.27■□□□□ 0.52
PMS1-213ENST00000441310 STXBP3O00186 592 aa18.27■□□□□ 0.52
PMS1-213ENST00000441310 PPEF1O14829 653 aaPredicted RBP18.27■□□□□ 0.52
PMS1-213ENST00000441310 LIN7AO14910 233 aaPredicted RBP18.27■□□□□ 0.52
PMS1-213ENST00000441310 SHBGP04278 402 aa18.27■□□□□ 0.52
PMS1-213ENST00000441310 CDK8P49336 464 aa18.27■□□□□ 0.52
PMS1-213ENST00000441310 CUL1Q13616 776 aa18.27■□□□□ 0.52
PMS1-213ENST00000441310 SLC35G1Q2M3R5 365 aa18.27■□□□□ 0.52
PMS1-213ENST00000441310 HEATR3Q7Z4Q2 680 aa18.27■□□□□ 0.52
PMS1-213ENST00000441310 MFN1Q8IWA4 741 aa18.27■□□□□ 0.52
PMS1-213ENST00000441310 TAF4BQ92750 862 aa18.27■□□□□ 0.52
PMS1-213ENST00000441310 DPH5Q9H2P9 285 aa18.27■□□□□ 0.52
PMS1-213ENST00000441310 GOLPH3Q9H4A6 298 aa18.27■□□□□ 0.52
PMS1-213ENST00000441310 CNOT10Q9H9A5 744 aaKnown RBP18.27■□□□□ 0.52
PMS1-213ENST00000441310 LY75O60449 1722 aa18.27■□□□□ 0.51
PMS1-213ENST00000441310 LCA5LO95447 670 aa18.27■□□□□ 0.51
PMS1-213ENST00000441310 RARAP10276 462 aa18.27■□□□□ 0.51
PMS1-213ENST00000441310 KLRC1P26715 233 aa18.27■□□□□ 0.51
PMS1-213ENST00000441310 ITIH4Q14624 930 aa18.27■□□□□ 0.51
PMS1-213ENST00000441310 EYA3Q99504 573 aa18.27■□□□□ 0.51
PMS1-213ENST00000441310 TRIM31Q9BZY9 425 aa18.27■□□□□ 0.51
PMS1-213ENST00000441310 CEP104O60308 925 aa18.26■□□□□ 0.51
PMS1-213ENST00000441310 HNRNPH3P31942 346 aaKnown RBP18.26■□□□□ 0.51
PMS1-213ENST00000441310 RANBP1P43487 201 aa18.26■□□□□ 0.51
PMS1-213ENST00000441310 MTMR3Q13615 1198 aa18.26■□□□□ 0.51
PMS1-213ENST00000441310 USP17L2Q6R6M4 530 aa18.26■□□□□ 0.51
PMS1-213ENST00000441310 CACNA2D4Q7Z3S7 1137 aa18.26■□□□□ 0.51
PMS1-213ENST00000441310 PIGWQ7Z7B1 504 aa18.26■□□□□ 0.51
PMS1-213ENST00000441310 DRAXINQ8NBI3 349 aaPredicted RBP18.26■□□□□ 0.51
PMS1-213ENST00000441310 P2RX5Q93086 422 aa18.26■□□□□ 0.51
PMS1-213ENST00000441310 FAM210AQ96ND0 272 aa18.26■□□□□ 0.51
PMS1-213ENST00000441310 NLRC4Q9NPP4 1024 aa18.26■□□□□ 0.51
PMS1-213ENST00000441310 ATP8A1Q9Y2Q0 1164 aa18.26■□□□□ 0.51
PMS1-213ENST00000441310 G3V3G9 751 aa18.26■□□□□ 0.51
PMS1-213ENST00000441310 TUBP50607 506 aa18.26■□□□□ 0.51
PMS1-213ENST00000441310 PPP4CP60510 307 aa18.26■□□□□ 0.51
PMS1-213ENST00000441310 FIGNQ5HY92 759 aa18.26■□□□□ 0.51
PMS1-213ENST00000441310 DCAF8Q5TAQ9 597 aa18.26■□□□□ 0.51
PMS1-213ENST00000441310 RNF10Q8N5U6 811 aaKnown RBP18.26■□□□□ 0.51
PMS1-213ENST00000441310 TEKT4Q8WW24 435 aa18.26■□□□□ 0.51
PMS1-213ENST00000441310 PRMT1Q99873 361 aaKnown RBP18.26■□□□□ 0.51
PMS1-213ENST00000441310 ZC3H12CQ9C0D7 883 aaKnown RBP18.26■□□□□ 0.51
PMS1-213ENST00000441310 TRIM33Q9UPN9 1127 aa18.26■□□□□ 0.51
PMS1-213ENST00000441310 CCDC88AQ3V6T2 1871 aa18.26■□□□□ 0.51
PMS1-213ENST00000441310 A0A1B0GVG6 124 aa18.25■□□□□ 0.51
PMS1-213ENST00000441310 MMP10P09238 476 aa18.25■□□□□ 0.51
PMS1-213ENST00000441310 MYBP10242 640 aa18.25■□□□□ 0.51
PMS1-213ENST00000441310 ROR2Q01974 943 aaKnown RBP18.25■□□□□ 0.51
PMS1-213ENST00000441310 PFKFB3Q16875 520 aaPredicted RBP18.25■□□□□ 0.51
PMS1-213ENST00000441310 PYM1Q9BRP8 204 aaKnown RBP18.25■□□□□ 0.51
PMS1-213ENST00000441310 KCNQ5Q9NR82 932 aa18.25■□□□□ 0.51
PMS1-213ENST00000441310 FAM205AQ6ZU69 1335 aa18.25■□□□□ 0.51
PMS1-213ENST00000441310 LRRD1A4D1F6 860 aa18.25■□□□□ 0.51
PMS1-213ENST00000441310 ASAP2O43150 1006 aa18.25■□□□□ 0.51
PMS1-213ENST00000441310 CYTH3O43739 400 aa18.25■□□□□ 0.51
PMS1-213ENST00000441310 KLRC4O43908 158 aa18.25■□□□□ 0.51
PMS1-213ENST00000441310 IL1R1P14778 569 aa18.25■□□□□ 0.51
PMS1-213ENST00000441310 FAM114A1Q8IWE2 563 aa18.25■□□□□ 0.51
PMS1-213ENST00000441310 GIMAP8Q8ND71 665 aaPredicted RBP18.25■□□□□ 0.51
PMS1-213ENST00000441310 B4GALNT2Q8NHY0 566 aa18.25■□□□□ 0.51
PMS1-213ENST00000441310 EZH1Q92800 747 aaPredicted RBP18.25■□□□□ 0.51
PMS1-213ENST00000441310 ADAM22Q9P0K1 906 aa18.25■□□□□ 0.51
PMS1-213ENST00000441310 FLT1P17948 1338 aa18.25■□□□□ 0.51
PMS1-213ENST00000441310 GPR75-ASB3A0A0A6YYF3 556 aa18.25■□□□□ 0.51
PMS1-213ENST00000441310 SPDYE3A6NKU9 549 aa18.25■□□□□ 0.51
PMS1-213ENST00000441310 F8VZ95 297 aa18.25■□□□□ 0.51
PMS1-213ENST00000441310 RHBDL3P58872 404 aa18.25■□□□□ 0.51
PMS1-213ENST00000441310 IFI16Q16666 785 aaKnown RBP18.25■□□□□ 0.51
PMS1-213ENST00000441310 DGKHQ86XP1 1220 aa18.25■□□□□ 0.51
PMS1-213ENST00000441310 CCNE1P24864 410 aa18.24■□□□□ 0.51
PMS1-213ENST00000441310 PCK1P35558 622 aa18.24■□□□□ 0.51
PMS1-213ENST00000441310 MEI1Q5TIA1 1274 aa18.24■□□□□ 0.51
PMS1-213ENST00000441310 TMC3Q7Z5M5 1100 aa18.24■□□□□ 0.51
PMS1-213ENST00000441310 UBA5Q9GZZ9 404 aa18.24■□□□□ 0.51
PMS1-213ENST00000441310 AMACRQ9UHK6 382 aa18.24■□□□□ 0.51
PMS1-213ENST00000441310 MAD2L2Q9UI95 211 aa18.24■□□□□ 0.51
PMS1-213ENST00000441310 LACTBP83111 547 aaPredicted RBP18.24■□□□□ 0.51
PMS1-213ENST00000441310 ATP11AP98196 1134 aa18.24■□□□□ 0.51
PMS1-213ENST00000441310 ARID5AQ03989 594 aa18.24■□□□□ 0.51
PMS1-213ENST00000441310 PPP1R15BQ5SWA1 713 aa18.24■□□□□ 0.51
PMS1-213ENST00000441310 TNFRSF25Q93038 417 aa18.24■□□□□ 0.51
PMS1-213ENST00000441310 HPS3Q969F9 1004 aa18.24■□□□□ 0.51
PMS1-213ENST00000441310 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.24■□□□□ 0.51
PMS1-213ENST00000441310 DISC1Q9NRI5 854 aa18.24■□□□□ 0.51
PMS1-213ENST00000441310 INTS9Q9NV88 658 aaKnown RBP18.24■□□□□ 0.51
PMS1-213ENST00000441310 DAGLAQ9Y4D2 1042 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms