RNA–Protein interactions for RNA: ENST00000441123.1

BRPF3-203, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 1 (best)

Gene BRPF3, Length 5,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-203ENST00000441123 TIPINQ9BVW5 301 aa13.89□□□□□ -0.19
BRPF3-203ENST00000441123 PPP1R12CQ9BZL4 782 aa13.89□□□□□ -0.19
BRPF3-203ENST00000441123 FOXN1O15353 648 aa13.88□□□□□ -0.19
BRPF3-203ENST00000441123 CTDNEP1O95476 244 aa13.88□□□□□ -0.19
BRPF3-203ENST00000441123 FDPSP14324 419 aaKnown RBP13.88□□□□□ -0.19
BRPF3-203ENST00000441123 CCNA1P78396 465 aa13.88□□□□□ -0.19
BRPF3-203ENST00000441123 ASPHQ12797 758 aa13.88□□□□□ -0.19
BRPF3-203ENST00000441123 RC3H1Q5TC82 1133 aaKnown RBP13.88□□□□□ -0.19
BRPF3-203ENST00000441123 TTBK2Q6IQ55 1244 aa13.88□□□□□ -0.19
BRPF3-203ENST00000441123 GIMAP8Q8ND71 665 aaPredicted RBP13.88□□□□□ -0.19
BRPF3-203ENST00000441123 EFCC1Q9HA90 598 aa13.88□□□□□ -0.19
BRPF3-203ENST00000441123 PDXKO00764 312 aa13.88□□□□□ -0.19
BRPF3-203ENST00000441123 SRGAP2BP0DMP2 458 aa13.88□□□□□ -0.19
BRPF3-203ENST00000441123 CNGA1P29973 690 aa13.88□□□□□ -0.19
BRPF3-203ENST00000441123 CHRNA3P32297 505 aa13.88□□□□□ -0.19
BRPF3-203ENST00000441123 KRT76Q01546 638 aa13.88□□□□□ -0.19
BRPF3-203ENST00000441123 GADL1Q6ZQY3 521 aa13.88□□□□□ -0.19
BRPF3-203ENST00000441123 ENOSF1Q7L5Y1 443 aa13.88□□□□□ -0.19
BRPF3-203ENST00000441123 TCP11Q8WWU5 503 aa13.88□□□□□ -0.19
BRPF3-203ENST00000441123 TUFT1Q9NNX1 390 aa13.88□□□□□ -0.19
BRPF3-203ENST00000441123 SSU72P8A0A1W2PR75 194 aa13.88□□□□□ -0.19
BRPF3-203ENST00000441123 E9PMD0 336 aa13.88□□□□□ -0.19
BRPF3-203ENST00000441123 FOXP2O15409 715 aa13.88□□□□□ -0.19
BRPF3-203ENST00000441123 CLTAP09496 248 aa13.88□□□□□ -0.19
BRPF3-203ENST00000441123 OSBPP22059 807 aa13.88□□□□□ -0.19
BRPF3-203ENST00000441123 HNRNPH2P55795 449 aaKnown RBP13.88□□□□□ -0.19
BRPF3-203ENST00000441123 CENPUQ71F23 418 aa13.88□□□□□ -0.19
BRPF3-203ENST00000441123 ADGRF4Q8IZF3 695 aa13.88□□□□□ -0.19
BRPF3-203ENST00000441123 FBXO41Q8TF61 875 aa13.88□□□□□ -0.19
BRPF3-203ENST00000441123 BEGAINQ9BUH8 593 aa13.88□□□□□ -0.19
BRPF3-203ENST00000441123 TJP3O95049 919 aa13.88□□□□□ -0.19
BRPF3-203ENST00000441123 GGCXP38435 758 aa13.88□□□□□ -0.19
BRPF3-203ENST00000441123 TMED2Q15363 201 aa13.88□□□□□ -0.19
BRPF3-203ENST00000441123 SLC27A3Q5K4L6 730 aa13.88□□□□□ -0.19
BRPF3-203ENST00000441123 RNF207Q6ZRF8 634 aa13.88□□□□□ -0.19
BRPF3-203ENST00000441123 DPF2Q92785 391 aa13.88□□□□□ -0.19
BRPF3-203ENST00000441123 TTC25Q96NG3 672 aa13.88□□□□□ -0.19
BRPF3-203ENST00000441123 NUF2Q9BZD4 464 aa13.88□□□□□ -0.19
BRPF3-203ENST00000441123 IPO11Q9UI26 975 aaKnown RBP13.88□□□□□ -0.19
BRPF3-203ENST00000441123 PALM3A6NDB9 673 aaPredicted RBP13.87□□□□□ -0.19
BRPF3-203ENST00000441123 NKX1-1Q15270 411 aaPredicted RBP13.87□□□□□ -0.19
BRPF3-203ENST00000441123 DCPSQ96C86 337 aaKnown RBP13.87□□□□□ -0.19
BRPF3-203ENST00000441123 QTRT2Q9H974 415 aaKnown RBP13.87□□□□□ -0.19
BRPF3-203ENST00000441123 ATP6V0A4Q9HBG4 840 aa13.87□□□□□ -0.19
BRPF3-203ENST00000441123 TBX3O15119 743 aa13.87□□□□□ -0.19
BRPF3-203ENST00000441123 PFDN6O15212 129 aa13.87□□□□□ -0.19
BRPF3-203ENST00000441123 FDX1P10109 184 aa13.87□□□□□ -0.19
BRPF3-203ENST00000441123 HOXA13P31271 388 aaPredicted RBP13.87□□□□□ -0.19
BRPF3-203ENST00000441123 KRT27Q7Z3Y8 459 aa13.87□□□□□ -0.19
BRPF3-203ENST00000441123 MYCBPQ99417 103 aaPredicted RBP13.87□□□□□ -0.19
BRPF3-203ENST00000441123 HINFPQ9BQA5 517 aa13.87□□□□□ -0.19
BRPF3-203ENST00000441123 TRIM9Q9C026 710 aa13.87□□□□□ -0.19
BRPF3-203ENST00000441123 TAF1DQ9H5J8 278 aaPredicted RBP13.87□□□□□ -0.19
BRPF3-203ENST00000441123 SNX1Q13596 522 aa13.87□□□□□ -0.19
BRPF3-203ENST00000441123 SP8Q8IXZ3 490 aa13.87□□□□□ -0.19
BRPF3-203ENST00000441123 TTC13Q8NBP0 860 aa13.87□□□□□ -0.19
BRPF3-203ENST00000441123 FAM167AQ96KS9 214 aa13.87□□□□□ -0.19
BRPF3-203ENST00000441123 WNT8AQ9H1J5 351 aa13.87□□□□□ -0.19
BRPF3-203ENST00000441123 WDR64B1ANS9 1081 aa13.87□□□□□ -0.19
BRPF3-203ENST00000441123 USP17L10C9JJH3 530 aa13.87□□□□□ -0.19
BRPF3-203ENST00000441123 SRGAP2O75044 1071 aa13.87□□□□□ -0.19
BRPF3-203ENST00000441123 DHX34Q14147 1143 aaKnown RBP13.87□□□□□ -0.19
BRPF3-203ENST00000441123 GBP5Q96PP8 586 aa13.87□□□□□ -0.19
BRPF3-203ENST00000441123 SPC25Q9HBM1 224 aa13.87□□□□□ -0.19
BRPF3-203ENST00000441123 KIF3CO14782 793 aa13.86□□□□□ -0.19
BRPF3-203ENST00000441123 CPP00450 1065 aa13.86□□□□□ -0.19
BRPF3-203ENST00000441123 IFNAR2P48551 515 aa13.86□□□□□ -0.19
BRPF3-203ENST00000441123 PADI6Q6TGC4 694 aa13.86□□□□□ -0.19
BRPF3-203ENST00000441123 COG1Q8WTW3 980 aa13.86□□□□□ -0.19
BRPF3-203ENST00000441123 INTS2Q9H0H0 1204 aaKnown RBP13.86□□□□□ -0.19
BRPF3-203ENST00000441123 TMEM260Q9NX78 707 aa13.86□□□□□ -0.19
BRPF3-203ENST00000441123 IQANK1A0A1B0GTG1 560 aa13.86□□□□□ -0.19
BRPF3-203ENST00000441123 EXOC1LA0A1B0GW35 172 aa13.86□□□□□ -0.19
BRPF3-203ENST00000441123 ARHGAP42A6NI28 874 aa13.86□□□□□ -0.19
BRPF3-203ENST00000441123 DAGLBQ8NCG7 672 aa13.86□□□□□ -0.19
BRPF3-203ENST00000441123 MYOM1P52179 1685 aa13.86□□□□□ -0.19
BRPF3-203ENST00000441123 EYA4O95677 639 aa13.86□□□□□ -0.19
BRPF3-203ENST00000441123 GH2P01242 217 aa13.86□□□□□ -0.19
BRPF3-203ENST00000441123 P4HBP07237 508 aaKnown RBP13.86□□□□□ -0.19
BRPF3-203ENST00000441123 FMR1Q06787 632 aaKnown RBP eCLIP13.86□□□□□ -0.193e-6■■□□□ 11.7
BRPF3-203ENST00000441123 ANKRD40Q6AI12 368 aa13.86□□□□□ -0.19
BRPF3-203ENST00000441123 FBXL16Q8N461 479 aa13.86□□□□□ -0.19
BRPF3-203ENST00000441123 IL25Q9H293 177 aa13.86□□□□□ -0.19
BRPF3-203ENST00000441123 UBE4BO95155 1302 aa13.86□□□□□ -0.19
BRPF3-203ENST00000441123 POTEB3A0JP26 581 aa13.86□□□□□ -0.19
BRPF3-203ENST00000441123 POTECB2RU33 542 aa13.86□□□□□ -0.19
BRPF3-203ENST00000441123 ATP5HO75947 161 aa13.86□□□□□ -0.19
BRPF3-203ENST00000441123 CALB1P05937 261 aa13.86□□□□□ -0.19
BRPF3-203ENST00000441123 POTEBQ6S5H4 581 aa13.86□□□□□ -0.19
BRPF3-203ENST00000441123 NYAP1Q6ZVC0 841 aa13.86□□□□□ -0.19
BRPF3-203ENST00000441123 MID2Q9UJV3 735 aa13.86□□□□□ -0.19
BRPF3-203ENST00000441123 HPS5Q9UPZ3 1129 aa13.86□□□□□ -0.19
BRPF3-203ENST00000441123 MT-ND3P03897 115 aa13.86□□□□□ -0.19
BRPF3-203ENST00000441123 TBXAS1P24557 533 aaPredicted RBP13.86□□□□□ -0.19
BRPF3-203ENST00000441123 MYO1EQ12965 1108 aa13.86□□□□□ -0.19
BRPF3-203ENST00000441123 MTMR1Q13613 665 aa13.86□□□□□ -0.19
BRPF3-203ENST00000441123 ZNF772Q68DY9 489 aaPredicted RBP13.86□□□□□ -0.19
BRPF3-203ENST00000441123 PROCA1Q8NCQ7 364 aaPredicted RBP13.86□□□□□ -0.19
BRPF3-203ENST00000441123 WDR24Q96S15 920 aa13.86□□□□□ -0.19
BRPF3-203ENST00000441123 MSTO1Q9BUK6 570 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms