RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 FXR1P51114 621 aaKnown RBP eCLIP20.23■□□□□ 0.83
CPSF4-205ENST00000440514 MRPS6P82932 125 aaKnown RBP20.23■□□□□ 0.83
CPSF4-205ENST00000440514 MGAT3Q09327 533 aa20.23■□□□□ 0.83
CPSF4-205ENST00000440514 LRIT3Q3SXY7 679 aa20.23■□□□□ 0.83
CPSF4-205ENST00000440514 FAM26DQ5JW98 314 aa20.23■□□□□ 0.83
CPSF4-205ENST00000440514 RASIP1Q5U651 963 aa20.23■□□□□ 0.83
CPSF4-205ENST00000440514 ANO5Q75V66 913 aa20.23■□□□□ 0.83
CPSF4-205ENST00000440514 SPRYD3Q8NCJ5 442 aa20.23■□□□□ 0.83
CPSF4-205ENST00000440514 HERVK_113Q902F9 699 aa20.23■□□□□ 0.83
CPSF4-205ENST00000440514 MTMR6Q9Y217 621 aa20.23■□□□□ 0.83
CPSF4-205ENST00000440514 CDY2AQ9Y6F7 541 aa20.23■□□□□ 0.83
CPSF4-205ENST00000440514 ZBBXA8MT70 800 aa20.22■□□□□ 0.83
CPSF4-205ENST00000440514 PARNO95453 639 aaKnown RBP20.22■□□□□ 0.83
CPSF4-205ENST00000440514 CHRNA1P02708 482 aa20.22■□□□□ 0.83
CPSF4-205ENST00000440514 CLCN3P51790 818 aa20.22■□□□□ 0.83
CPSF4-205ENST00000440514 RESTQ13127 1097 aa20.22■□□□□ 0.83
CPSF4-205ENST00000440514 TARBP2Q15633 366 aaKnown RBP20.22■□□□□ 0.83
CPSF4-205ENST00000440514 FAM109BQ6ICB4 259 aaPredicted RBP20.22■□□□□ 0.83
CPSF4-205ENST00000440514 BRAPQ7Z569 592 aa20.22■□□□□ 0.83
CPSF4-205ENST00000440514 LRRC71Q8N4P6 559 aa20.22■□□□□ 0.83
CPSF4-205ENST00000440514 LRCH3Q96II8 777 aa20.22■□□□□ 0.83
CPSF4-205ENST00000440514 EVPLQ92817 2033 aa20.22■□□□□ 0.83
CPSF4-205ENST00000440514 GHRP10912 638 aa20.21■□□□□ 0.83
CPSF4-205ENST00000440514 TMEM266Q2M3C6 531 aa20.21■□□□□ 0.83
CPSF4-205ENST00000440514 CNKSR3Q6P9H4 555 aa20.21■□□□□ 0.83
CPSF4-205ENST00000440514 TPH2Q8IWU9 490 aa20.21■□□□□ 0.83
CPSF4-205ENST00000440514 KIAA0319LQ8IZA0 1049 aa20.21■□□□□ 0.83
CPSF4-205ENST00000440514 METTL13Q8N6R0 699 aa20.21■□□□□ 0.83
CPSF4-205ENST00000440514 NEK9Q8TD19 979 aa20.21■□□□□ 0.83
CPSF4-205ENST00000440514 CEP89Q96ST8 783 aa20.21■□□□□ 0.83
CPSF4-205ENST00000440514 PPP1R16BQ96T49 567 aa20.21■□□□□ 0.83
CPSF4-205ENST00000440514 NIFKQ9BYG3 293 aaKnown RBP20.21■□□□□ 0.83
CPSF4-205ENST00000440514 ZSWIM4Q9H7M6 989 aa20.21■□□□□ 0.83
CPSF4-205ENST00000440514 LAMA3Q16787 3333 aa20.2■□□□□ 0.82
CPSF4-205ENST00000440514 PTPRSQ13332 1948 aa20.2■□□□□ 0.82
CPSF4-205ENST00000440514 STX6O43752 255 aa20.2■□□□□ 0.82
CPSF4-205ENST00000440514 DKC1O60832 514 aaKnown RBP eCLIP20.2■□□□□ 0.82
CPSF4-205ENST00000440514 SLITRK3O94933 977 aa20.2■□□□□ 0.82
CPSF4-205ENST00000440514 ACTN1P12814 892 aa20.2■□□□□ 0.82
CPSF4-205ENST00000440514 PDIA4P13667 645 aaKnown RBP20.2■□□□□ 0.82
CPSF4-205ENST00000440514 FXR2P51116 673 aaKnown RBP eCLIP20.2■□□□□ 0.82
CPSF4-205ENST00000440514 NPEPPSP55786 919 aa20.2■□□□□ 0.82
CPSF4-205ENST00000440514 ATP2C1P98194 919 aaPredicted RBP20.2■□□□□ 0.82
CPSF4-205ENST00000440514 TBC1D8BQ0IIM8 1120 aa20.2■□□□□ 0.82
CPSF4-205ENST00000440514 C4orf19Q8IY42 314 aa20.2■□□□□ 0.82
CPSF4-205ENST00000440514 LINC01465Q8N7H1 131 aa20.2■□□□□ 0.82
CPSF4-205ENST00000440514 ZNF579Q8NAF0 562 aaKnown RBP20.2■□□□□ 0.82
CPSF4-205ENST00000440514 HSD17B14Q9BPX1 270 aa20.2■□□□□ 0.82
CPSF4-205ENST00000440514 MTIF3Q9H2K0 278 aaKnown RBP20.2■□□□□ 0.82
CPSF4-205ENST00000440514 TRPV2Q9Y5S1 764 aa20.2■□□□□ 0.82
CPSF4-205ENST00000440514 ZBTB39O15060 712 aa20.19■□□□□ 0.82
CPSF4-205ENST00000440514 MAGEB2O15479 319 aa20.19■□□□□ 0.82
CPSF4-205ENST00000440514 MED24O75448 989 aa20.19■□□□□ 0.82
CPSF4-205ENST00000440514 VTNP04004 478 aa20.19■□□□□ 0.82
CPSF4-205ENST00000440514 RPLP2P05387 115 aaKnown RBP20.19■□□□□ 0.82
CPSF4-205ENST00000440514 YWHABP31946 246 aaKnown RBP20.19■□□□□ 0.82
CPSF4-205ENST00000440514 LPIN1Q14693 890 aa20.19■□□□□ 0.82
CPSF4-205ENST00000440514 IL17AQ16552 155 aa20.19■□□□□ 0.82
CPSF4-205ENST00000440514 EFCAB12Q6NXP0 572 aa20.19■□□□□ 0.82
CPSF4-205ENST00000440514 FAM173BQ6P4H8 233 aa20.19■□□□□ 0.82
CPSF4-205ENST00000440514 DBF4BQ8NFT6 615 aa20.19■□□□□ 0.82
CPSF4-205ENST00000440514 CYP26B1Q9NR63 512 aa20.19■□□□□ 0.82
CPSF4-205ENST00000440514 LOXHD1Q8IVV2 1947 aa20.19■□□□□ 0.82
CPSF4-205ENST00000440514 MYH15Q9Y2K3 1946 aa20.19■□□□□ 0.82
CPSF4-205ENST00000440514 GBF1Q92538 1859 aa20.18■□□□□ 0.82
CPSF4-205ENST00000440514 GRXCR1A8MXD5 290 aa20.18■□□□□ 0.82
CPSF4-205ENST00000440514 M0QZ92 97 aa20.18■□□□□ 0.82
CPSF4-205ENST00000440514 LAD1O00515 517 aa20.18■□□□□ 0.82
CPSF4-205ENST00000440514 SPATA31C1P0DKV0 1188 aa20.18■□□□□ 0.82
CPSF4-205ENST00000440514 PRPHP41219 470 aa20.18■□□□□ 0.82
CPSF4-205ENST00000440514 PLEKHG4Q58EX7 1191 aa20.18■□□□□ 0.82
CPSF4-205ENST00000440514 FBXO47Q5MNV8 452 aa20.18■□□□□ 0.82
CPSF4-205ENST00000440514 IER5Q5VY09 327 aa20.18■□□□□ 0.82
CPSF4-205ENST00000440514 CEP170P1Q96L14 293 aa20.18■□□□□ 0.82
CPSF4-205ENST00000440514 CELF4Q9BZC1 486 aaKnown RBP20.18■□□□□ 0.82
CPSF4-205ENST00000440514 SUGCTQ9HAC7 445 aa20.18■□□□□ 0.82
CPSF4-205ENST00000440514 BMP2KQ9NSY1 1161 aaPredicted RBP20.18■□□□□ 0.82
CPSF4-205ENST00000440514 LRWD1Q9UFC0 647 aa20.18■□□□□ 0.82
CPSF4-205ENST00000440514 AKT3Q9Y243 479 aa20.18■□□□□ 0.82
CPSF4-205ENST00000440514 GINS2Q9Y248 185 aa20.18■□□□□ 0.82
CPSF4-205ENST00000440514 MICAL3Q7RTP6 2002 aa20.18■□□□□ 0.82
CPSF4-205ENST00000440514 A0A087WWV3 80 aa20.17■□□□□ 0.82
CPSF4-205ENST00000440514 BAIAP3O94812 1187 aa20.17■□□□□ 0.82
CPSF4-205ENST00000440514 LYPLA2O95372 231 aa20.17■□□□□ 0.82
CPSF4-205ENST00000440514 MKRN4PQ13434 485 aaPredicted RBP20.17■□□□□ 0.82
CPSF4-205ENST00000440514 DRP2Q13474 957 aa20.17■□□□□ 0.82
CPSF4-205ENST00000440514 KIZQ2M2Z5 673 aa20.17■□□□□ 0.82
CPSF4-205ENST00000440514 XKR9Q5GH70 373 aa20.17■□□□□ 0.82
CPSF4-205ENST00000440514 POTEGQ6S5H5 508 aa20.17■□□□□ 0.82
CPSF4-205ENST00000440514 CATSPER3Q86XQ3 398 aa20.17■□□□□ 0.82
CPSF4-205ENST00000440514 NME8Q8N427 588 aa20.17■□□□□ 0.82
CPSF4-205ENST00000440514 IGSF22Q8N9C0 903 aa20.17■□□□□ 0.82
CPSF4-205ENST00000440514 SEPT8Q92599 483 aa20.17■□□□□ 0.82
CPSF4-205ENST00000440514 ZNF668Q96K58 619 aaPredicted RBP20.17■□□□□ 0.82
CPSF4-205ENST00000440514 MAP7D2Q96T17 732 aa20.17■□□□□ 0.82
CPSF4-205ENST00000440514 IFIH1Q9BYX4 1025 aaKnown RBP20.17■□□□□ 0.82
CPSF4-205ENST00000440514 CDHR5Q9HBB8 845 aa20.17■□□□□ 0.82
CPSF4-205ENST00000440514 TUFT1Q9NNX1 390 aa20.17■□□□□ 0.82
CPSF4-205ENST00000440514 SLC4A7Q9Y6M7 1214 aa20.17■□□□□ 0.82
CPSF4-205ENST00000440514 PP2D1A8MPX8 630 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms