RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 SERPINC1P01008 464 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 MARCKSP29966 332 aaPredicted RBP5.29□□□□□ -1.56
EDEM3-203ENST00000439962 CCND2P30279 289 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 RGS19P49795 217 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 ETF1P62495 437 aaKnown RBP5.29□□□□□ -1.56
EDEM3-203ENST00000439962 TKFCQ3LXA3 575 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 DUSP28Q4G0W2 176 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 FILIP1LQ4L180 1135 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 TTC38Q5R3I4 469 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 CDKAL1Q5VV42 579 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 E4F1Q66K89 784 aaPredicted RBP5.29□□□□□ -1.56
EDEM3-203ENST00000439962 FAM109BQ6ICB4 259 aaPredicted RBP5.29□□□□□ -1.56
EDEM3-203ENST00000439962 MAMDC4Q6UXC1 1216 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 ZNF662Q6ZS27 426 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 TMC6Q7Z403 805 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 REXO1Q8N1G1 1221 aaKnown RBP5.29□□□□□ -1.56
EDEM3-203ENST00000439962 MSL3Q8N5Y2 521 aaKnown RBP5.29□□□□□ -1.56
EDEM3-203ENST00000439962 C7orf31Q8N865 590 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 ANO3Q9BYT9 981 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 KATNBL1Q9H079 304 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 SETD4Q9NVD3 440 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 DNAI1Q9UI46 699 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 GNEQ9Y223 722 aaKnown RBP5.29□□□□□ -1.56
EDEM3-203ENST00000439962 TRIP12Q14669 1992 aaPredicted RBP5.29□□□□□ -1.56
EDEM3-203ENST00000439962 MYH7BA7E2Y1 1941 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 MYO15AQ9UKN7 3530 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.28□□□□□ -1.56
EDEM3-203ENST00000439962 FAM86B1E9PN63 330 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 CSDE1O75534 798 aaKnown RBP5.28□□□□□ -1.56
EDEM3-203ENST00000439962 EIF3JO75822 258 aaKnown RBP5.28□□□□□ -1.56
EDEM3-203ENST00000439962 UPP2O95045 317 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 FAM86B2P0C5J1 330 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 MRPL12P52815 198 aaKnown RBP5.28□□□□□ -1.56
EDEM3-203ENST00000439962 GABPB1Q06547 395 aaPredicted RBP5.28□□□□□ -1.56
EDEM3-203ENST00000439962 NCBP1Q09161 790 aaKnown RBP5.28□□□□□ -1.56
EDEM3-203ENST00000439962 DPYDQ12882 1025 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 PNOCQ13519 176 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 ARID5BQ14865 1188 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 NR1I3Q14994 352 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 BRDTQ58F21 947 aaPredicted RBP5.28□□□□□ -1.56
EDEM3-203ENST00000439962 PRPF38BQ5VTL8 546 aaKnown RBP5.28□□□□□ -1.56
EDEM3-203ENST00000439962 PPP1R18Q6NYC8 613 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 FILIP1Q7Z7B0 1213 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 PCSK9Q8NBP7 692 aaKnown RBP5.28□□□□□ -1.56
EDEM3-203ENST00000439962 ANKRD20A12PQ8NF67 263 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 TET1Q8NFU7 2136 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 C16orf45Q96MC5 204 aaPredicted RBP5.28□□□□□ -1.56
EDEM3-203ENST00000439962 CCSER1Q9C0I3 900 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 KCNH7Q9NS40 1196 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 BARHL2Q9NY43 387 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 FAM53CQ9NYF3 392 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 HDAC6Q9UBN7 1215 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 LIMA1Q9UHB6 759 aaKnown RBP5.28□□□□□ -1.56
EDEM3-203ENST00000439962 RWDD2AQ9UIY3 292 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 DDX41Q9UJV9 622 aaKnown RBP5.28□□□□□ -1.56
EDEM3-203ENST00000439962 SYNPO2Q9UMS6 1093 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 DIS3Q9Y2L1 958 aaKnown RBP5.28□□□□□ -1.56
EDEM3-203ENST00000439962 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.28□□□□□ -1.56
EDEM3-203ENST00000439962 TRANK1O15050 2925 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 PRRC2BQ5JSZ5 2229 aaKnown RBP5.28□□□□□ -1.56
EDEM3-203ENST00000439962 PARP14Q460N5 1801 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 GRIN2DO15399 1336 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 SOX1O00570 391 aaPredicted RBP5.28□□□□□ -1.56
EDEM3-203ENST00000439962 TDP2O95551 362 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 CLTBP09497 229 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 PBX1P40424 430 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 HSD17B4P51659 736 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 EPHB4P54760 987 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 FAAP100Q0VG06 881 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 CUL4BQ13620 913 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 GNPTABQ3T906 1256 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 EARS2Q5JPH6 523 aaKnown RBP5.28□□□□□ -1.56
EDEM3-203ENST00000439962 IQSEC1Q6DN90 963 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 CNNM4Q6P4Q7 775 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 VSIG10LQ86VR7 867 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 CNGA4Q8IV77 575 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 MICALL1Q8N3F8 863 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 DNERQ8NFT8 737 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 TBCKQ8TEA7 893 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 NAP1L4Q99733 375 aaKnown RBP5.28□□□□□ -1.56
EDEM3-203ENST00000439962 HIPK3Q9H422 1215 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 DOCK5Q9H7D0 1870 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 VTA1Q9NP79 307 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 PCDHA4Q9UN74 947 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 TRPC6Q9Y210 931 aa5.28□□□□□ -1.56
EDEM3-203ENST00000439962 A0A1W2PQC6 194 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 EFCAB8A8MWE9 144 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 B4DLN1 442 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 M0R2N6 131 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 POLR2DO15514 142 aaKnown RBP5.27□□□□□ -1.57
EDEM3-203ENST00000439962 CCNT1O60563 726 aaKnown RBP5.27□□□□□ -1.57
EDEM3-203ENST00000439962 GH1P01241 217 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 MMP3P08254 477 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 TCF7P36402 384 aaPredicted RBP5.27□□□□□ -1.57
EDEM3-203ENST00000439962 CPT1AP50416 773 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 ARHGAP4P98171 946 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 PURAQ00577 322 aaKnown RBP5.27□□□□□ -1.57
EDEM3-203ENST00000439962 SHHQ15465 462 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 NPY5RQ15761 445 aa5.27□□□□□ -1.57
EDEM3-203ENST00000439962 E2F4Q16254 413 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms