RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 WHAMMP3Q1A5X7 153 aa12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 MSANTD4Q8NCY6 345 aa12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 GMCL1P1Q8NEA9 526 aa12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 LIMA1Q9UHB6 759 aaKnown RBP12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 CDC23Q9UJX2 597 aa12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 TMOD1P28289 359 aa12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 SFNP31947 248 aa12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 SEL1L2Q5TEA6 688 aa12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 DAAM2Q86T65 1068 aa12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 TYW1Q9NV66 732 aaKnown RBP12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 SEL1LQ9UBV2 794 aa12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 RASAL2Q9UJF2 1139 aa12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 TSKSQ9UJT2 592 aa12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 MTUS1Q9ULD2 1270 aa12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 ARFGEF2Q9Y6D5 1785 aa12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 K7ERI5 159 aa12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 SLC16A4O15374 487 aa12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 GFPT2O94808 682 aa12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 CD44P16070 742 aaKnown RBP12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 KIF11P52732 1056 aa12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 PSMC5P62195 406 aa12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 RPS6P62753 249 aaKnown RBP12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 E2F4Q16254 413 aa12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 KLHL7Q8IXQ5 586 aa12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 NT5C1BQ96P26 610 aa12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 FUT8Q9BYC5 575 aa12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 TUFT1Q9NNX1 390 aa12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 FEZ2Q9UHY8 353 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 PNMA3Q9UL41 463 aa12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 NOD1Q9Y239 953 aa12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 NR3C2P08235 984 aa12.58□□□□□ -0.4
TRAPPC9-202ENST00000438773 FERP16591 822 aa12.58□□□□□ -0.4
TRAPPC9-202ENST00000438773 NMT1P30419 496 aaKnown RBP12.58□□□□□ -0.4
TRAPPC9-202ENST00000438773 LIG3P49916 1009 aa12.58□□□□□ -0.4
TRAPPC9-202ENST00000438773 GRB10Q13322 594 aa12.58□□□□□ -0.4
TRAPPC9-202ENST00000438773 ALCAMQ13740 583 aa12.58□□□□□ -0.4
TRAPPC9-202ENST00000438773 LONRF2Q1L5Z9 754 aa12.58□□□□□ -0.4
TRAPPC9-202ENST00000438773 PNMA8AQ86V59 439 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC9-202ENST00000438773 SYCE1Q8N0S2 351 aa12.58□□□□□ -0.4
TRAPPC9-202ENST00000438773 REEP2Q9BRK0 252 aa12.58□□□□□ -0.4
TRAPPC9-202ENST00000438773 KBTBD4Q9NVX7 518 aa12.58□□□□□ -0.4
TRAPPC9-202ENST00000438773 ACTN2P35609 894 aa12.58□□□□□ -0.4
TRAPPC9-202ENST00000438773 NR1I3Q14994 352 aa12.58□□□□□ -0.4
TRAPPC9-202ENST00000438773 LIN9Q5TKA1 542 aa12.58□□□□□ -0.4
TRAPPC9-202ENST00000438773 GPR161Q8N6U8 529 aaKnown RBP12.58□□□□□ -0.4
TRAPPC9-202ENST00000438773 MCPH1Q8NEM0 835 aa12.58□□□□□ -0.4
TRAPPC9-202ENST00000438773 TRIM31Q9BZY9 425 aa12.58□□□□□ -0.4
TRAPPC9-202ENST00000438773 HYOU1Q9Y4L1 999 aa12.58□□□□□ -0.4
TRAPPC9-202ENST00000438773 PCDHA10Q9Y5I2 948 aa12.58□□□□□ -0.4
TRAPPC9-202ENST00000438773 A0A087X0B3 334 aa12.58□□□□□ -0.4
TRAPPC9-202ENST00000438773 MSH4O15457 936 aa12.58□□□□□ -0.4
TRAPPC9-202ENST00000438773 VIL1P09327 827 aaKnown RBP12.58□□□□□ -0.4
TRAPPC9-202ENST00000438773 TCP1P17987 556 aaKnown RBP12.58□□□□□ -0.4
TRAPPC9-202ENST00000438773 ATP1A2P50993 1020 aa12.58□□□□□ -0.4
TRAPPC9-202ENST00000438773 SND1Q7KZF4 910 aaKnown RBP eCLIP12.58□□□□□ -0.4
TRAPPC9-202ENST00000438773 CATSPER3Q86XQ3 398 aa12.58□□□□□ -0.4
TRAPPC9-202ENST00000438773 SCYL3Q8IZE3 742 aa12.58□□□□□ -0.4
TRAPPC9-202ENST00000438773 UBL4BQ8N7F7 174 aa12.58□□□□□ -0.4
TRAPPC9-202ENST00000438773 MED15Q96RN5 788 aa12.58□□□□□ -0.4
TRAPPC9-202ENST00000438773 NDUFAB1O14561 156 aa12.57□□□□□ -0.4
TRAPPC9-202ENST00000438773 KCNK3O14649 394 aa12.57□□□□□ -0.4
TRAPPC9-202ENST00000438773 EHHADHQ08426 723 aa12.57□□□□□ -0.4
TRAPPC9-202ENST00000438773 HOOK3Q86VS8 718 aa12.57□□□□□ -0.4
TRAPPC9-202ENST00000438773 NAP1L3Q99457 506 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC9-202ENST00000438773 JPH2Q9BR39 696 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC9-202ENST00000438773 ADAM21Q9UKJ8 722 aa12.57□□□□□ -0.4
TRAPPC9-202ENST00000438773 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.57□□□□□ -0.4
TRAPPC9-202ENST00000438773 NEBLO76041 1014 aa12.57□□□□□ -0.4
TRAPPC9-202ENST00000438773 ABL1P00519 1130 aa12.57□□□□□ -0.4
TRAPPC9-202ENST00000438773 TMEM191BP0C7N4 346 aa12.57□□□□□ -0.4
TRAPPC9-202ENST00000438773 SRGAP2CP0DJJ0 459 aa12.57□□□□□ -0.4
TRAPPC9-202ENST00000438773 RSRC2Q7L4I2 434 aaKnown RBP12.57□□□□□ -0.4
TRAPPC9-202ENST00000438773 CCDC26Q8TAB7 109 aa12.57□□□□□ -0.4
TRAPPC9-202ENST00000438773 MXRA8Q9BRK3 442 aa12.57□□□□□ -0.4
TRAPPC9-202ENST00000438773 AMFRQ9UKV5 643 aa12.57□□□□□ -0.4
TRAPPC9-202ENST00000438773 HIP1RO75146 1068 aa12.57□□□□□ -0.4
TRAPPC9-202ENST00000438773 ICAM1P05362 532 aa12.57□□□□□ -0.4
TRAPPC9-202ENST00000438773 SREBF1P36956 1147 aa12.57□□□□□ -0.4
TRAPPC9-202ENST00000438773 FXR1P51114 621 aaKnown RBP eCLIP12.57□□□□□ -0.4
TRAPPC9-202ENST00000438773 GSTA5Q7RTV2 222 aa12.57□□□□□ -0.4
TRAPPC9-202ENST00000438773 FAM76AQ8TAV0 307 aa12.57□□□□□ -0.4
TRAPPC9-202ENST00000438773 SPC25Q9HBM1 224 aa12.57□□□□□ -0.4
TRAPPC9-202ENST00000438773 UBE2TQ9NPD8 197 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC9-202ENST00000438773 ADGRG1Q9Y653 693 aa12.57□□□□□ -0.4
TRAPPC9-202ENST00000438773 A0A1W2PQC6 194 aa12.57□□□□□ -0.4
TRAPPC9-202ENST00000438773 LRRC53A6NM62 1247 aa12.57□□□□□ -0.4
TRAPPC9-202ENST00000438773 SERPING1P05155 500 aa12.57□□□□□ -0.4
TRAPPC9-202ENST00000438773 DCUN1D2Q6PH85 259 aa12.57□□□□□ -0.4
TRAPPC9-202ENST00000438773 XXYLT1Q8NBI6 393 aa12.57□□□□□ -0.4
TRAPPC9-202ENST00000438773 ADPGKQ9BRR6 497 aa12.57□□□□□ -0.4
TRAPPC9-202ENST00000438773 KCNH7Q9NS40 1196 aa12.57□□□□□ -0.4
TRAPPC9-202ENST00000438773 STRCP1A6NGW2 1772 aa12.56□□□□□ -0.4
TRAPPC9-202ENST00000438773 PDE6CP51160 858 aa12.56□□□□□ -0.4
TRAPPC9-202ENST00000438773 AFAP1L1Q8TED9 768 aa12.56□□□□□ -0.4
TRAPPC9-202ENST00000438773 UBXN6Q9BZV1 441 aa12.56□□□□□ -0.4
TRAPPC9-202ENST00000438773 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC9-202ENST00000438773 AKT3Q9Y243 479 aa12.56□□□□□ -0.4
TRAPPC9-202ENST00000438773 MFAP3P55082 362 aa12.56□□□□□ -0.4
TRAPPC9-202ENST00000438773 TBX2Q13207 712 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC9-202ENST00000438773 RAD9BQ6WBX8 426 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms