RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 SCN10AQ9Y5Y9 1956 aa17.13■□□□□ 0.33
CNOT9-205ENST00000433439 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.12■□□□□ 0.33
CNOT9-205ENST00000433439 A0A1W2PQ27 194 aa17.12■□□□□ 0.33
CNOT9-205ENST00000433439 A0A1W2PQ64 194 aa17.12■□□□□ 0.33
CNOT9-205ENST00000433439 A0A1W2PQD8 194 aa17.12■□□□□ 0.33
CNOT9-205ENST00000433439 ARHGEF35A5YM69 484 aa17.12■□□□□ 0.33
CNOT9-205ENST00000433439 ARVCFO00192 962 aa17.12■□□□□ 0.33
CNOT9-205ENST00000433439 POLR2DO15514 142 aaKnown RBP17.12■□□□□ 0.33
CNOT9-205ENST00000433439 LYPLA2O95372 231 aa17.12■□□□□ 0.33
CNOT9-205ENST00000433439 COL6A1P12109 1028 aa17.12■□□□□ 0.33
CNOT9-205ENST00000433439 MUTP22033 750 aa17.12■□□□□ 0.33
CNOT9-205ENST00000433439 ZNF484Q5JVG2 852 aa17.12■□□□□ 0.33
CNOT9-205ENST00000433439 HYIQ5T013 277 aa17.12■□□□□ 0.33
CNOT9-205ENST00000433439 NFRKBQ6P4R8 1299 aa17.12■□□□□ 0.33
CNOT9-205ENST00000433439 SLC39A5Q6ZMH5 540 aa17.12■□□□□ 0.33
CNOT9-205ENST00000433439 CCDC73Q6ZRK6 1079 aa17.12■□□□□ 0.33
CNOT9-205ENST00000433439 CLEC17AQ6ZS10 378 aa17.12■□□□□ 0.33
CNOT9-205ENST00000433439 TMEM87AQ8NBN3 555 aa17.12■□□□□ 0.33
CNOT9-205ENST00000433439 LMBR1Q8WVP7 490 aa17.12■□□□□ 0.33
CNOT9-205ENST00000433439 BHMT2Q9H2M3 363 aa17.12■□□□□ 0.33
CNOT9-205ENST00000433439 GOLPH3LQ9H4A5 285 aa17.12■□□□□ 0.33
CNOT9-205ENST00000433439 CYP26B1Q9NR63 512 aa17.12■□□□□ 0.33
CNOT9-205ENST00000433439 ANKEF1Q9NU02 776 aa17.12■□□□□ 0.33
CNOT9-205ENST00000433439 KCNH3Q9ULD8 1083 aa17.12■□□□□ 0.33
CNOT9-205ENST00000433439 NOD1Q9Y239 953 aa17.12■□□□□ 0.33
CNOT9-205ENST00000433439 KAT6AQ92794 2004 aa17.11■□□□□ 0.33
CNOT9-205ENST00000433439 SLC26A4O43511 780 aa17.11■□□□□ 0.33
CNOT9-205ENST00000433439 PQBP1O60828 265 aaKnown RBP17.11■□□□□ 0.33
CNOT9-205ENST00000433439 SYKP43405 635 aa17.11■□□□□ 0.33
CNOT9-205ENST00000433439 NDUFA8P51970 172 aa17.11■□□□□ 0.33
CNOT9-205ENST00000433439 HIC1Q14526 733 aa17.11■□□□□ 0.33
CNOT9-205ENST00000433439 MCM6Q14566 821 aa17.11■□□□□ 0.33
CNOT9-205ENST00000433439 GDF6Q6KF10 455 aaPredicted RBP17.11■□□□□ 0.33
CNOT9-205ENST00000433439 LRRC15Q8TF66 581 aa17.11■□□□□ 0.33
CNOT9-205ENST00000433439 NIFKQ9BYG3 293 aaKnown RBP17.11■□□□□ 0.33
CNOT9-205ENST00000433439 GTF2IRD1Q9UHL9 959 aa17.11■□□□□ 0.33
CNOT9-205ENST00000433439 ATP11BQ9Y2G3 1177 aa17.11■□□□□ 0.33
CNOT9-205ENST00000433439 NRCAMQ92823 1304 aa17.11■□□□□ 0.33
CNOT9-205ENST00000433439 RRN3P2A6NIE6 340 aa17.1■□□□□ 0.33
CNOT9-205ENST00000433439 TREHO43280 583 aa17.1■□□□□ 0.33
CNOT9-205ENST00000433439 USO1O60763 962 aaKnown RBP17.1■□□□□ 0.33
CNOT9-205ENST00000433439 EYA4O95677 639 aa17.1■□□□□ 0.33
CNOT9-205ENST00000433439 PLA2G4BP0C869 781 aa17.1■□□□□ 0.33
CNOT9-205ENST00000433439 GNAT1P11488 350 aa17.1■□□□□ 0.33
CNOT9-205ENST00000433439 KLRC1P26715 233 aa17.1■□□□□ 0.33
CNOT9-205ENST00000433439 RARRES1P49788 294 aa17.1■□□□□ 0.33
CNOT9-205ENST00000433439 POLGP54098 1239 aaPredicted RBP17.1■□□□□ 0.33
CNOT9-205ENST00000433439 TBC1D8BQ0IIM8 1120 aa17.1■□□□□ 0.33
CNOT9-205ENST00000433439 PTGISQ16647 500 aa17.1■□□□□ 0.33
CNOT9-205ENST00000433439 TRIM60Q495X7 471 aa17.1■□□□□ 0.33
CNOT9-205ENST00000433439 MAEAQ7L5Y9 396 aa17.1■□□□□ 0.33
CNOT9-205ENST00000433439 METTL13Q8N6R0 699 aa17.1■□□□□ 0.33
CNOT9-205ENST00000433439 RAD54LQ92698 747 aa17.1■□□□□ 0.33
CNOT9-205ENST00000433439 TRPV6Q9H1D0 765 aa17.1■□□□□ 0.33
CNOT9-205ENST00000433439 SUGCTQ9HAC7 445 aa17.1■□□□□ 0.33
CNOT9-205ENST00000433439 BLOC1S4Q9NUP1 217 aa17.1■□□□□ 0.33
CNOT9-205ENST00000433439 TRMT13Q9NUP7 481 aaKnown RBP17.1■□□□□ 0.33
CNOT9-205ENST00000433439 TUBE1Q9UJT0 475 aa17.1■□□□□ 0.33
CNOT9-205ENST00000433439 DBR1Q9UK59 544 aaKnown RBP17.1■□□□□ 0.33
CNOT9-205ENST00000433439 ZBTB42B2RXF5 422 aa17.09■□□□□ 0.33
CNOT9-205ENST00000433439 XRCC6P12956 609 aaKnown RBP eCLIP17.09■□□□□ 0.33
CNOT9-205ENST00000433439 RTP1P59025 263 aa17.09■□□□□ 0.33
CNOT9-205ENST00000433439 UBE2HP62256 183 aa17.09■□□□□ 0.33
CNOT9-205ENST00000433439 PTPN11Q06124 597 aaPredicted RBP17.09■□□□□ 0.33
CNOT9-205ENST00000433439 TARBP2Q15633 366 aaKnown RBP17.09■□□□□ 0.33
CNOT9-205ENST00000433439 LRRC26Q2I0M4 334 aa17.09■□□□□ 0.33
CNOT9-205ENST00000433439 PADI6Q6TGC4 694 aa17.09■□□□□ 0.33
CNOT9-205ENST00000433439 LRRC71Q8N4P6 559 aa17.09■□□□□ 0.33
CNOT9-205ENST00000433439 IQUBQ8NA54 791 aa17.09■□□□□ 0.33
CNOT9-205ENST00000433439 LARP4BQ92615 738 aaKnown RBP17.09■□□□□ 0.33
CNOT9-205ENST00000433439 STAMQ92783 540 aa17.09■□□□□ 0.33
CNOT9-205ENST00000433439 STK17AQ9UEE5 414 aa17.09■□□□□ 0.33
CNOT9-205ENST00000433439 SERTAD1Q9UHV2 236 aa17.09■□□□□ 0.33
CNOT9-205ENST00000433439 COL1A2P08123 1366 aa17.09■□□□□ 0.33
CNOT9-205ENST00000433439 TLR3O15455 904 aaKnown RBP17.08■□□□□ 0.32
CNOT9-205ENST00000433439 B4GALT4O60513 344 aa17.08■□□□□ 0.32
CNOT9-205ENST00000433439 CYP2C9P11712 490 aa17.08■□□□□ 0.32
CNOT9-205ENST00000433439 LIG1P18858 919 aa17.08■□□□□ 0.32
CNOT9-205ENST00000433439 CDK7P50613 346 aa17.08■□□□□ 0.32
CNOT9-205ENST00000433439 TLE2Q04725 743 aa17.08■□□□□ 0.32
CNOT9-205ENST00000433439 RAD51AP2Q09MP3 1159 aa17.08■□□□□ 0.32
CNOT9-205ENST00000433439 NAALADL2Q58DX5 795 aa17.08■□□□□ 0.32
CNOT9-205ENST00000433439 MARCH8Q5T0T0 291 aa17.08■□□□□ 0.32
CNOT9-205ENST00000433439 MTHFD1LQ6UB35 978 aa17.08■□□□□ 0.32
CNOT9-205ENST00000433439 SESTD1Q86VW0 696 aa17.08■□□□□ 0.32
CNOT9-205ENST00000433439 GPBP1Q86WP2 473 aa17.08■□□□□ 0.32
CNOT9-205ENST00000433439 CEP57L1Q8IYX8 460 aa17.08■□□□□ 0.32
CNOT9-205ENST00000433439 SLC43A3Q8NBI5 491 aa17.08■□□□□ 0.32
CNOT9-205ENST00000433439 SLC7A3Q8WY07 619 aa17.08■□□□□ 0.32
CNOT9-205ENST00000433439 FAM49AQ9H0Q0 323 aaPredicted RBP17.08■□□□□ 0.32
CNOT9-205ENST00000433439 POLD4Q9HCU8 107 aa17.08■□□□□ 0.32
CNOT9-205ENST00000433439 LMBRD1Q9NUN5 540 aa17.08■□□□□ 0.32
CNOT9-205ENST00000433439 HPSEQ9Y251 543 aa17.08■□□□□ 0.32
CNOT9-205ENST00000433439 TRIP12Q14669 1992 aaPredicted RBP17.08■□□□□ 0.32
CNOT9-205ENST00000433439 MROH7Q68CQ1 1323 aa17.07■□□□□ 0.32
CNOT9-205ENST00000433439 DCDC2CA8MYV0 355 aa17.07■□□□□ 0.32
CNOT9-205ENST00000433439 ZNF202O95125 648 aa17.07■□□□□ 0.32
CNOT9-205ENST00000433439 C22orf31O95567 290 aa17.07■□□□□ 0.32
CNOT9-205ENST00000433439 KRT18P05783 430 aaKnown RBP17.07■□□□□ 0.32
CNOT9-205ENST00000433439 EMC2Q15006 297 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms