RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 TRPC6Q9Y210 931 aa17.16■□□□□ 0.34
PTCD1-204ENST00000430982 KIF3AQ9Y496 699 aa17.16■□□□□ 0.34
PTCD1-204ENST00000430982 LINC01553A4QN01 128 aa17.15■□□□□ 0.34
PTCD1-204ENST00000430982 GRXCR2A6NFK2 248 aa17.15■□□□□ 0.34
PTCD1-204ENST00000430982 WDR64B1ANS9 1081 aa17.15■□□□□ 0.34
PTCD1-204ENST00000430982 MARCH6O60337 910 aa17.15■□□□□ 0.34
PTCD1-204ENST00000430982 PSAPP07602 524 aa17.15■□□□□ 0.34
PTCD1-204ENST00000430982 IGBP1P78318 339 aa17.15■□□□□ 0.34
PTCD1-204ENST00000430982 PLCB4Q15147 1175 aa17.15■□□□□ 0.34
PTCD1-204ENST00000430982 GRIK4Q16099 956 aa17.15■□□□□ 0.34
PTCD1-204ENST00000430982 TCTN1Q2MV58 587 aa17.15■□□□□ 0.34
PTCD1-204ENST00000430982 PPP4R3AQ6IN85 833 aa17.15■□□□□ 0.34
PTCD1-204ENST00000430982 SWSAP1Q6NVH7 229 aa17.15■□□□□ 0.34
PTCD1-204ENST00000430982 PDXDC2PQ6P474 469 aa17.15■□□□□ 0.34
PTCD1-204ENST00000430982 CNKSR3Q6P9H4 555 aa17.15■□□□□ 0.34
PTCD1-204ENST00000430982 CCDC60Q8IWA6 550 aaPredicted RBP17.15■□□□□ 0.34
PTCD1-204ENST00000430982 SMAP1Q8IYB5 467 aaPredicted RBP17.15■□□□□ 0.34
PTCD1-204ENST00000430982 FBXO18Q8NFZ0 1043 aa17.15■□□□□ 0.34
PTCD1-204ENST00000430982 ETNPPLQ8TBG4 499 aa17.15■□□□□ 0.34
PTCD1-204ENST00000430982 NEK9Q8TD19 979 aa17.15■□□□□ 0.34
PTCD1-204ENST00000430982 LMBR1Q8WVP7 490 aa17.15■□□□□ 0.34
PTCD1-204ENST00000430982 WNT8BQ93098 351 aa17.15■□□□□ 0.34
PTCD1-204ENST00000430982 TGS1Q96RS0 853 aaKnown RBP17.15■□□□□ 0.34
PTCD1-204ENST00000430982 RAD9AQ99638 391 aa17.15■□□□□ 0.34
PTCD1-204ENST00000430982 UNC45AQ9H3U1 944 aa17.15■□□□□ 0.34
PTCD1-204ENST00000430982 PCDHA10Q9Y5I2 948 aa17.15■□□□□ 0.34
PTCD1-204ENST00000430982 NRCAMQ92823 1304 aa17.15■□□□□ 0.34
PTCD1-204ENST00000430982 IGKV6D-21A0A0A0MT36 114 aa17.14■□□□□ 0.33
PTCD1-204ENST00000430982 PARNO95453 639 aaKnown RBP17.14■□□□□ 0.33
PTCD1-204ENST00000430982 SELPP16109 830 aa17.14■□□□□ 0.33
PTCD1-204ENST00000430982 ATP2B1P20020 1258 aa17.14■□□□□ 0.33
PTCD1-204ENST00000430982 KCNA5P22460 613 aa17.14■□□□□ 0.33
PTCD1-204ENST00000430982 GJB2P29033 226 aa17.14■□□□□ 0.33
PTCD1-204ENST00000430982 HOXC8P31273 242 aa17.14■□□□□ 0.33
PTCD1-204ENST00000430982 COL19A1Q14993 1142 aa17.14■□□□□ 0.33
PTCD1-204ENST00000430982 PTCRAQ6ISU1 281 aaPredicted RBP17.14■□□□□ 0.33
PTCD1-204ENST00000430982 SERINC5Q86VE9 423 aa17.14■□□□□ 0.33
PTCD1-204ENST00000430982 CKAP2LQ8IYA6 745 aa17.14■□□□□ 0.33
PTCD1-204ENST00000430982 FBXL18Q96ME1 805 aa17.14■□□□□ 0.33
PTCD1-204ENST00000430982 DISC1Q9NRI5 854 aa17.14■□□□□ 0.33
PTCD1-204ENST00000430982 GABBR1Q9UBS5 961 aa17.14■□□□□ 0.33
PTCD1-204ENST00000430982 SMC3Q9UQE7 1217 aa17.14■□□□□ 0.33
PTCD1-204ENST00000430982 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.14■□□□□ 0.33
PTCD1-204ENST00000430982 ABHD14A-ACY1A0A1B0GW23 586 aa17.13■□□□□ 0.33
PTCD1-204ENST00000430982 NBNO60934 754 aa17.13■□□□□ 0.33
PTCD1-204ENST00000430982 PSMD10O75832 226 aa17.13■□□□□ 0.33
PTCD1-204ENST00000430982 CKBP12277 381 aa17.13■□□□□ 0.33
PTCD1-204ENST00000430982 INSRRP14616 1297 aa17.13■□□□□ 0.33
PTCD1-204ENST00000430982 THPOP40225 353 aa17.13■□□□□ 0.33
PTCD1-204ENST00000430982 SLC26A2P50443 739 aa17.13■□□□□ 0.33
PTCD1-204ENST00000430982 JAK3P52333 1124 aa17.13■□□□□ 0.33
PTCD1-204ENST00000430982 MKRN4PQ13434 485 aaPredicted RBP17.13■□□□□ 0.33
PTCD1-204ENST00000430982 TRIM71Q2Q1W2 868 aaKnown RBP17.13■□□□□ 0.33
PTCD1-204ENST00000430982 PUS10Q3MIT2 529 aaKnown RBP17.13■□□□□ 0.33
PTCD1-204ENST00000430982 LRRC8DQ7L1W4 858 aa17.13■□□□□ 0.33
PTCD1-204ENST00000430982 MIER3Q7Z3K6 550 aa17.13■□□□□ 0.33
PTCD1-204ENST00000430982 POTEDQ86YR6 584 aa17.13■□□□□ 0.33
PTCD1-204ENST00000430982 TNPO1Q92973 898 aaKnown RBP17.13■□□□□ 0.33
PTCD1-204ENST00000430982 FOXP1Q9H334 677 aaPredicted RBP17.13■□□□□ 0.33
PTCD1-204ENST00000430982 TRIOO75962 3097 aa17.13■□□□□ 0.33
PTCD1-204ENST00000430982 COL4A6Q14031 1691 aa17.13■□□□□ 0.33
PTCD1-204ENST00000430982 RRN3P2A6NIE6 340 aa17.12■□□□□ 0.33
PTCD1-204ENST00000430982 DCXO43602 365 aa17.12■□□□□ 0.33
PTCD1-204ENST00000430982 EFCAB14O75071 495 aa17.12■□□□□ 0.33
PTCD1-204ENST00000430982 SFNP31947 248 aa17.12■□□□□ 0.33
PTCD1-204ENST00000430982 ADAM17P78536 824 aa17.12■□□□□ 0.33
PTCD1-204ENST00000430982 ZNF618Q5T7W0 954 aa17.12■□□□□ 0.33
PTCD1-204ENST00000430982 TRAF7Q6Q0C0 670 aa17.12■□□□□ 0.33
PTCD1-204ENST00000430982 TRMT1LQ7Z2T5 733 aaKnown RBP17.12■□□□□ 0.33
PTCD1-204ENST00000430982 ATP8B4Q8TF62 1192 aa17.12■□□□□ 0.33
PTCD1-204ENST00000430982 TRAPPC12Q8WVT3 735 aa17.12■□□□□ 0.33
PTCD1-204ENST00000430982 FAM20AQ96MK3 541 aa17.12■□□□□ 0.33
PTCD1-204ENST00000430982 ZBED2Q9BTP6 218 aa17.12■□□□□ 0.33
PTCD1-204ENST00000430982 KCNMB3Q9NPA1 279 aa17.12■□□□□ 0.33
PTCD1-204ENST00000430982 TUBE1Q9UJT0 475 aa17.12■□□□□ 0.33
PTCD1-204ENST00000430982 C19orf67A6NJJ6 358 aa17.11■□□□□ 0.33
PTCD1-204ENST00000430982 WNT7AO00755 349 aa17.11■□□□□ 0.33
PTCD1-204ENST00000430982 HBP1O60381 514 aa17.11■□□□□ 0.33
PTCD1-204ENST00000430982 BAG4O95429 457 aaKnown RBP17.11■□□□□ 0.33
PTCD1-204ENST00000430982 CTSHP09668 335 aa17.11■□□□□ 0.33
PTCD1-204ENST00000430982 SSTR3P32745 418 aaPredicted RBP17.11■□□□□ 0.33
PTCD1-204ENST00000430982 RUFY4Q6ZNE9 571 aa17.11■□□□□ 0.33
PTCD1-204ENST00000430982 ZBTB10Q96DT7 871 aa17.11■□□□□ 0.33
PTCD1-204ENST00000430982 MTUS1Q9ULD2 1270 aa17.11■□□□□ 0.33
PTCD1-204ENST00000430982 MAFBQ9Y5Q3 323 aaPredicted RBP17.11■□□□□ 0.33
PTCD1-204ENST00000430982 H3BQV1 296 aa17.1■□□□□ 0.33
PTCD1-204ENST00000430982 TBX3O15119 743 aa17.1■□□□□ 0.33
PTCD1-204ENST00000430982 NEMFO60524 1076 aa17.1■□□□□ 0.33
PTCD1-204ENST00000430982 ATP4AP20648 1035 aa17.1■□□□□ 0.33
PTCD1-204ENST00000430982 ZP2Q05996 745 aa17.1■□□□□ 0.33
PTCD1-204ENST00000430982 CALCRLQ16602 461 aa17.1■□□□□ 0.33
PTCD1-204ENST00000430982 MCTP1Q6DN14 999 aa17.1■□□□□ 0.33
PTCD1-204ENST00000430982 TAF2Q6P1X5 1199 aa17.1■□□□□ 0.33
PTCD1-204ENST00000430982 NOSTRINQ8IVI9 506 aa17.1■□□□□ 0.33
PTCD1-204ENST00000430982 RDM1Q8NG50 284 aa17.1■□□□□ 0.33
PTCD1-204ENST00000430982 SP7Q8TDD2 431 aaPredicted RBP17.1■□□□□ 0.33
PTCD1-204ENST00000430982 HAS1Q92839 578 aa17.1■□□□□ 0.33
PTCD1-204ENST00000430982 MRPL38Q96DV4 380 aaKnown RBP17.1■□□□□ 0.33
PTCD1-204ENST00000430982 VAV3Q9UKW4 847 aa17.1■□□□□ 0.33
PTCD1-204ENST00000430982 IGSF9BQ9UPX0 1349 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms