RNA–Protein interactions for RNA: ENST00000429899.1

ATG4B-211, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 524 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-211ENST00000429899 APOBRQ0VD83 1088 aa11.57□□□□□ -0.56
ATG4B-211ENST00000429899 ST3GAL1Q11201 340 aa11.57□□□□□ -0.56
ATG4B-211ENST00000429899 TRDNQ13061 729 aa11.57□□□□□ -0.56
ATG4B-211ENST00000429899 VARS2Q5ST30 1063 aaKnown RBP11.57□□□□□ -0.56
ATG4B-211ENST00000429899 PLPP4Q5VZY2 271 aa11.57□□□□□ -0.56
ATG4B-211ENST00000429899 RUFY4Q6ZNE9 571 aa11.57□□□□□ -0.56
ATG4B-211ENST00000429899 MFSD6Q6ZSS7 791 aa11.57□□□□□ -0.56
ATG4B-211ENST00000429899 ZDHHC14Q8IZN3 488 aa11.57□□□□□ -0.56
ATG4B-211ENST00000429899 FEZF2Q8TBJ5 459 aa11.57□□□□□ -0.56
ATG4B-211ENST00000429899 GPKOWQ92917 476 aaPredicted RBP eCLIP11.57□□□□□ -0.56
ATG4B-211ENST00000429899 NECTIN4Q96NY8 510 aa11.57□□□□□ -0.56
ATG4B-211ENST00000429899 KRT23Q9C075 422 aa11.57□□□□□ -0.56
ATG4B-211ENST00000429899 CPVLQ9H3G5 476 aa11.57□□□□□ -0.56
ATG4B-211ENST00000429899 AGO3Q9H9G7 860 aaKnown RBP11.57□□□□□ -0.56
ATG4B-211ENST00000429899 HCSTQ9UBK5 93 aa11.57□□□□□ -0.56
ATG4B-211ENST00000429899 FLNBO75369 2602 aaKnown RBP11.56□□□□□ -0.56
ATG4B-211ENST00000429899 NID2Q14112 1375 aa11.56□□□□□ -0.56
ATG4B-211ENST00000429899 HIDE1A8MVS5 230 aa11.56□□□□□ -0.56
ATG4B-211ENST00000429899 SH2B2O14492 632 aaPredicted RBP11.56□□□□□ -0.56
ATG4B-211ENST00000429899 KINO60870 393 aaKnown RBP11.56□□□□□ -0.56
ATG4B-211ENST00000429899 FGF18O76093 207 aa11.56□□□□□ -0.56
ATG4B-211ENST00000429899 NR3C2P08235 984 aa11.56□□□□□ -0.56
ATG4B-211ENST00000429899 PDHBP11177 359 aa11.56□□□□□ -0.56
ATG4B-211ENST00000429899 HOXB8P17481 243 aaPredicted RBP11.56□□□□□ -0.56
ATG4B-211ENST00000429899 IBSPP21815 317 aaPredicted RBP11.56□□□□□ -0.56
ATG4B-211ENST00000429899 UBA1P22314 1058 aaKnown RBP11.56□□□□□ -0.56
ATG4B-211ENST00000429899 EVCP57679 992 aa11.56□□□□□ -0.56
ATG4B-211ENST00000429899 LMNB2Q03252 620 aa11.56□□□□□ -0.56
ATG4B-211ENST00000429899 CUL4AQ13619 759 aa11.56□□□□□ -0.56
ATG4B-211ENST00000429899 ANKRD1Q15327 319 aa11.56□□□□□ -0.56
ATG4B-211ENST00000429899 FBXO47Q5MNV8 452 aa11.56□□□□□ -0.56
ATG4B-211ENST00000429899 SPOUT1Q5T280 376 aaKnown RBP11.56□□□□□ -0.56
ATG4B-211ENST00000429899 ARHGEF16Q5VV41 709 aa11.56□□□□□ -0.56
ATG4B-211ENST00000429899 Q6ZUG5 572 aa11.56□□□□□ -0.56
ATG4B-211ENST00000429899 GPR161Q8N6U8 529 aaKnown RBP11.56□□□□□ -0.56
ATG4B-211ENST00000429899 RASGRP4Q8TDF6 673 aa11.56□□□□□ -0.56
ATG4B-211ENST00000429899 LMBR1Q8WVP7 490 aa11.56□□□□□ -0.56
ATG4B-211ENST00000429899 TMX3Q96JJ7 454 aa11.56□□□□□ -0.56
ATG4B-211ENST00000429899 ZFP91Q96JP5 570 aaPredicted RBP11.56□□□□□ -0.56
ATG4B-211ENST00000429899 TMEM47Q9BQJ4 181 aa11.56□□□□□ -0.56
ATG4B-211ENST00000429899 MTA3Q9BTC8 594 aa11.56□□□□□ -0.56
ATG4B-211ENST00000429899 LRRC2Q9BYS8 371 aa11.56□□□□□ -0.56
ATG4B-211ENST00000429899 PXMP2Q9NR77 195 aa11.56□□□□□ -0.56
ATG4B-211ENST00000429899 BAZ2BQ9UIF8 2168 aaKnown RBP11.56□□□□□ -0.56
ATG4B-211ENST00000429899 TPCN1Q9ULQ1 816 aa11.56□□□□□ -0.56
ATG4B-211ENST00000429899 USP18Q9UMW8 372 aa11.56□□□□□ -0.56
ATG4B-211ENST00000429899 TELO2Q9Y4R8 837 aa11.56□□□□□ -0.56
ATG4B-211ENST00000429899 MYH15Q9Y2K3 1946 aa11.56□□□□□ -0.56
ATG4B-211ENST00000429899 SLC3A2P08195 630 aaKnown RBP11.55□□□□□ -0.56
ATG4B-211ENST00000429899 ARHGAP4P98171 946 aa11.55□□□□□ -0.56
ATG4B-211ENST00000429899 UBE3AQ05086 875 aa11.55□□□□□ -0.56
ATG4B-211ENST00000429899 TPRNQ4KMQ1 711 aa11.55□□□□□ -0.56
ATG4B-211ENST00000429899 PPP4R3BQ5MIZ7 849 aa11.55□□□□□ -0.56
ATG4B-211ENST00000429899 KANK3Q6NY19 840 aa11.55□□□□□ -0.56
ATG4B-211ENST00000429899 TRIM50Q86XT4 487 aa11.55□□□□□ -0.56
ATG4B-211ENST00000429899 PLCD3Q8N3E9 789 aa11.55□□□□□ -0.56
ATG4B-211ENST00000429899 ESR2Q92731 530 aa11.55□□□□□ -0.56
ATG4B-211ENST00000429899 BRF1Q92994 677 aa11.55□□□□□ -0.56
ATG4B-211ENST00000429899 TMEM87BQ96K49 555 aa11.55□□□□□ -0.56
ATG4B-211ENST00000429899 ADAM7Q9H2U9 754 aa11.55□□□□□ -0.56
ATG4B-211ENST00000429899 RNF216Q9NWF9 866 aaPredicted RBP11.55□□□□□ -0.56
ATG4B-211ENST00000429899 TMEM260Q9NX78 707 aa11.55□□□□□ -0.56
ATG4B-211ENST00000429899 DBR1Q9UK59 544 aaKnown RBP11.55□□□□□ -0.56
ATG4B-211ENST00000429899 LIMCH1Q9UPQ0 1083 aa11.55□□□□□ -0.56
ATG4B-211ENST00000429899 PCDHB12Q9Y5F1 795 aa11.55□□□□□ -0.56
ATG4B-211ENST00000429899 CNOT1A5YKK6 2376 aaKnown RBP11.55□□□□□ -0.56
ATG4B-211ENST00000429899 RANBP6O60518 1105 aaKnown RBP11.54□□□□□ -0.56
ATG4B-211ENST00000429899 DCNP07585 359 aaKnown RBP11.54□□□□□ -0.56
ATG4B-211ENST00000429899 MYCLP12524 364 aaPredicted RBP11.54□□□□□ -0.56
ATG4B-211ENST00000429899 CD52P31358 61 aa11.54□□□□□ -0.56
ATG4B-211ENST00000429899 MTHFRP42898 656 aa11.54□□□□□ -0.56
ATG4B-211ENST00000429899 ZNF543Q08ER8 600 aa11.54□□□□□ -0.56
ATG4B-211ENST00000429899 TDGQ13569 410 aa11.54□□□□□ -0.56
ATG4B-211ENST00000429899 SEC23AQ15436 765 aa11.54□□□□□ -0.56
ATG4B-211ENST00000429899 ME3Q16798 604 aa11.54□□□□□ -0.56
ATG4B-211ENST00000429899 RRP12Q5JTH9 1297 aaKnown RBP11.54□□□□□ -0.56
ATG4B-211ENST00000429899 SGMS1Q86VZ5 419 aa11.54□□□□□ -0.56
ATG4B-211ENST00000429899 NPAS4Q8IUM7 802 aa11.54□□□□□ -0.56
ATG4B-211ENST00000429899 IGDCC4Q8TDY8 1250 aa11.54□□□□□ -0.56
ATG4B-211ENST00000429899 LY9Q9HBG7 655 aa11.54□□□□□ -0.56
ATG4B-211ENST00000429899 ENTPD7Q9NQZ7 604 aa11.54□□□□□ -0.56
ATG4B-211ENST00000429899 ZSWIM5Q9P217 1185 aa11.54□□□□□ -0.56
ATG4B-211ENST00000429899 ANGPTL2Q9UKU9 493 aa11.54□□□□□ -0.56
ATG4B-211ENST00000429899 PNMA2Q9UL42 364 aa11.54□□□□□ -0.56
ATG4B-211ENST00000429899 COL4A3Q01955 1670 aa11.54□□□□□ -0.56
ATG4B-211ENST00000429899 WDFY3Q8IZQ1 3526 aa11.54□□□□□ -0.56
ATG4B-211ENST00000429899 DOCK6Q96HP0 2047 aa11.53□□□□□ -0.56
ATG4B-211ENST00000429899 SOBPA7XYQ1 873 aa11.53□□□□□ -0.56
ATG4B-211ENST00000429899 NARSO43776 548 aaKnown RBP11.53□□□□□ -0.56
ATG4B-211ENST00000429899 CFHP08603 1231 aa11.53□□□□□ -0.56
ATG4B-211ENST00000429899 GOLGA8HP0CJ92 632 aa11.53□□□□□ -0.56
ATG4B-211ENST00000429899 TOP1P11387 765 aaKnown RBP11.53□□□□□ -0.56
ATG4B-211ENST00000429899 GNAT1P11488 350 aa11.53□□□□□ -0.56
ATG4B-211ENST00000429899 DDIT3P35638 169 aa11.53□□□□□ -0.56
ATG4B-211ENST00000429899 ITIH3Q06033 890 aa11.53□□□□□ -0.56
ATG4B-211ENST00000429899 TBC1D8BQ0IIM8 1120 aa11.53□□□□□ -0.56
ATG4B-211ENST00000429899 RARS2Q5T160 578 aaKnown RBP11.53□□□□□ -0.56
ATG4B-211ENST00000429899 TSHZ1Q6ZSZ6 1077 aa11.53□□□□□ -0.56
ATG4B-211ENST00000429899 C1orf210Q8IVY1 113 aa11.53□□□□□ -0.56
ATG4B-211ENST00000429899 THNSL1Q8IYQ7 743 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms