RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 ZBTB39O15060 712 aa24.97■■□□□ 1.59
PTPN18-205ENST00000428843 TIMP1P01033 207 aa24.97■■□□□ 1.59
PTPN18-205ENST00000428843 CYP2C18P33260 490 aa24.97■■□□□ 1.59
PTPN18-205ENST00000428843 LONP1P36776 959 aaKnown RBP24.97■■□□□ 1.59
PTPN18-205ENST00000428843 BFSP2Q13515 415 aa24.97■■□□□ 1.59
PTPN18-205ENST00000428843 ECM1Q16610 540 aa24.97■■□□□ 1.59
PTPN18-205ENST00000428843 KRT79Q5XKE5 535 aa24.97■■□□□ 1.59
PTPN18-205ENST00000428843 CCDC155Q8N6L0 562 aa24.97■■□□□ 1.59
PTPN18-205ENST00000428843 CHAMP1Q96JM3 812 aa24.97■■□□□ 1.59
PTPN18-205ENST00000428843 AK8Q96MA6 479 aa24.97■■□□□ 1.59
PTPN18-205ENST00000428843 MMTAG2Q9BU76 263 aaKnown RBP24.97■■□□□ 1.59
PTPN18-205ENST00000428843 CFAP45Q9UL16 551 aa24.97■■□□□ 1.59
PTPN18-205ENST00000428843 PCDHA2Q9Y5H9 948 aa24.97■■□□□ 1.59
PTPN18-205ENST00000428843 ATP6V1DQ9Y5K8 247 aa24.97■■□□□ 1.59
PTPN18-205ENST00000428843 TCHHQ07283 1943 aa24.96■■□□□ 1.59
PTPN18-205ENST00000428843 A0A087WWV3 80 aa24.96■■□□□ 1.59
PTPN18-205ENST00000428843 SPTLC2O15270 562 aa24.96■■□□□ 1.59
PTPN18-205ENST00000428843 C22orf31O95567 290 aa24.96■■□□□ 1.59
PTPN18-205ENST00000428843 NPEPPSP55786 919 aa24.96■■□□□ 1.59
PTPN18-205ENST00000428843 POTEGQ6S5H5 508 aa24.96■■□□□ 1.59
PTPN18-205ENST00000428843 OTUD6AQ7L8S5 288 aa24.96■■□□□ 1.59
PTPN18-205ENST00000428843 CAGE1Q8TC20 777 aa24.96■■□□□ 1.59
PTPN18-205ENST00000428843 CEP89Q96ST8 783 aa24.96■■□□□ 1.59
PTPN18-205ENST00000428843 CSRNP2Q9H175 543 aa24.96■■□□□ 1.59
PTPN18-205ENST00000428843 PITPNM1O00562 1244 aa24.95■■□□□ 1.58
PTPN18-205ENST00000428843 MUTP22033 750 aa24.95■■□□□ 1.58
PTPN18-205ENST00000428843 RBL2Q08999 1139 aa24.95■■□□□ 1.58
PTPN18-205ENST00000428843 TAF2Q6P1X5 1199 aa24.95■■□□□ 1.58
PTPN18-205ENST00000428843 KRI1Q8N9T8 703 aaKnown RBP24.95■■□□□ 1.58
PTPN18-205ENST00000428843 ZNF579Q8NAF0 562 aaKnown RBP24.95■■□□□ 1.58
PTPN18-205ENST00000428843 PIGOQ8TEQ8 1089 aa24.95■■□□□ 1.58
PTPN18-205ENST00000428843 CEP170P1Q96L14 293 aa24.95■■□□□ 1.58
PTPN18-205ENST00000428843 CLIC6Q96NY7 704 aa24.95■■□□□ 1.58
PTPN18-205ENST00000428843 CYP26B1Q9NR63 512 aa24.95■■□□□ 1.58
PTPN18-205ENST00000428843 CIZ1Q9ULV3 898 aaPredicted RBP24.95■■□□□ 1.58
PTPN18-205ENST00000428843 TANC1Q9C0D5 1861 aa24.94■■□□□ 1.58
PTPN18-205ENST00000428843 MAGEB2O15479 319 aa24.94■■□□□ 1.58
PTPN18-205ENST00000428843 PPP6R2O75170 966 aa24.94■■□□□ 1.58
PTPN18-205ENST00000428843 CKBP12277 381 aa24.94■■□□□ 1.58
PTPN18-205ENST00000428843 THPOP40225 353 aa24.94■■□□□ 1.58
PTPN18-205ENST00000428843 CCL23P55773 120 aa24.94■■□□□ 1.58
PTPN18-205ENST00000428843 XKR9Q5GH70 373 aa24.94■■□□□ 1.58
PTPN18-205ENST00000428843 RETREG2Q8NC44 543 aa24.94■■□□□ 1.58
PTPN18-205ENST00000428843 DNAJB3Q8WWF6 145 aa24.94■■□□□ 1.58
PTPN18-205ENST00000428843 BADQ92934 168 aa24.94■■□□□ 1.58
PTPN18-205ENST00000428843 NACC1Q96RE7 527 aa24.94■■□□□ 1.58
PTPN18-205ENST00000428843 WNT8AQ9H1J5 351 aa24.94■■□□□ 1.58
PTPN18-205ENST00000428843 ANKEF1Q9NU02 776 aa24.94■■□□□ 1.58
PTPN18-205ENST00000428843 KIAA1024Q9UPX6 916 aa24.94■■□□□ 1.58
PTPN18-205ENST00000428843 SMIM35A0A1B0GVV1 85 aa24.93■■□□□ 1.58
PTPN18-205ENST00000428843 XRCC6P12956 609 aaKnown RBP eCLIP24.93■■□□□ 1.58
PTPN18-205ENST00000428843 NCLP19338 710 aaKnown RBP24.93■■□□□ 1.58
PTPN18-205ENST00000428843 KRT85P78386 507 aa24.93■■□□□ 1.58
PTPN18-205ENST00000428843 TBC1D8BQ0IIM8 1120 aa24.93■■□□□ 1.58
PTPN18-205ENST00000428843 SPECC1Q5M775 1068 aa24.93■■□□□ 1.58
PTPN18-205ENST00000428843 ZNF618Q5T7W0 954 aa24.93■■□□□ 1.58
PTPN18-205ENST00000428843 CABP7Q86V35 215 aa24.93■■□□□ 1.58
PTPN18-205ENST00000428843 FAM49AQ9H0Q0 323 aaPredicted RBP24.93■■□□□ 1.58
PTPN18-205ENST00000428843 DDX19AQ9NUU7 478 aaKnown RBP24.93■■□□□ 1.58
PTPN18-205ENST00000428843 MDM2Q00987 491 aaPredicted RBP24.92■■□□□ 1.58
PTPN18-205ENST00000428843 ZRSR1Q15695 479 aaKnown RBP24.92■■□□□ 1.58
PTPN18-205ENST00000428843 HYIQ5T013 277 aa24.92■■□□□ 1.58
PTPN18-205ENST00000428843 MFSD5Q6N075 450 aa24.92■■□□□ 1.58
PTPN18-205ENST00000428843 EFCAB12Q6NXP0 572 aa24.92■■□□□ 1.58
PTPN18-205ENST00000428843 RPAINQ86UA6 219 aa24.92■■□□□ 1.58
PTPN18-205ENST00000428843 METTL13Q8N6R0 699 aa24.92■■□□□ 1.58
PTPN18-205ENST00000428843 KCNG4Q8TDN1 519 aa24.92■■□□□ 1.58
PTPN18-205ENST00000428843 SCLYQ96I15 445 aa24.92■■□□□ 1.58
PTPN18-205ENST00000428843 IPO9Q96P70 1041 aaKnown RBP24.92■■□□□ 1.58
PTPN18-205ENST00000428843 LBHD1Q9BQE6 289 aaPredicted RBP24.92■■□□□ 1.58
PTPN18-205ENST00000428843 PPME1Q9Y570 386 aa24.92■■□□□ 1.58
PTPN18-205ENST00000428843 SCN5AQ14524 2016 aa24.91■■□□□ 1.58
PTPN18-205ENST00000428843 KDM3AQ9Y4C1 1321 aa24.91■■□□□ 1.58
PTPN18-205ENST00000428843 CAND2O75155 1236 aa24.91■■□□□ 1.58
PTPN18-205ENST00000428843 IQCF3P0C7M6 154 aa24.91■■□□□ 1.58
PTPN18-205ENST00000428843 SELPP16109 830 aa24.91■■□□□ 1.58
PTPN18-205ENST00000428843 UBA7P41226 1012 aa24.91■■□□□ 1.58
PTPN18-205ENST00000428843 MAGEA10P43363 369 aaPredicted RBP24.91■■□□□ 1.58
PTPN18-205ENST00000428843 RARRES1P49788 294 aa24.91■■□□□ 1.58
PTPN18-205ENST00000428843 CLCN3P51790 818 aa24.91■■□□□ 1.58
PTPN18-205ENST00000428843 GRB10Q13322 594 aa24.91■■□□□ 1.58
PTPN18-205ENST00000428843 TRAF7Q6Q0C0 670 aa24.91■■□□□ 1.58
PTPN18-205ENST00000428843 LRRC8DQ7L1W4 858 aa24.91■■□□□ 1.58
PTPN18-205ENST00000428843 RSPH3Q86UC2 560 aa24.91■■□□□ 1.58
PTPN18-205ENST00000428843 LRRC71Q8N4P6 559 aa24.91■■□□□ 1.58
PTPN18-205ENST00000428843 TMEM199Q8N511 208 aa24.91■■□□□ 1.58
PTPN18-205ENST00000428843 LINC01465Q8N7H1 131 aa24.91■■□□□ 1.58
PTPN18-205ENST00000428843 PNMA5Q96PV4 448 aa24.91■■□□□ 1.58
PTPN18-205ENST00000428843 DBR1Q9UK59 544 aaKnown RBP24.91■■□□□ 1.58
PTPN18-205ENST00000428843 RCOR1Q9UKL0 485 aa24.91■■□□□ 1.58
PTPN18-205ENST00000428843 LOXHD1Q8IVV2 1947 aa24.9■■□□□ 1.58
PTPN18-205ENST00000428843 MAFO75444 373 aaPredicted RBP24.9■■□□□ 1.58
PTPN18-205ENST00000428843 CTSHP09668 335 aa24.9■■□□□ 1.58
PTPN18-205ENST00000428843 USP49Q70CQ1 688 aa24.9■■□□□ 1.58
PTPN18-205ENST00000428843 KIAA0319LQ8IZA0 1049 aa24.9■■□□□ 1.58
PTPN18-205ENST00000428843 EPSTI1Q96J88 318 aa24.9■■□□□ 1.58
PTPN18-205ENST00000428843 CCDC43Q96MW1 224 aaKnown RBP24.9■■□□□ 1.58
PTPN18-205ENST00000428843 PLIN2Q99541 437 aa24.9■■□□□ 1.58
PTPN18-205ENST00000428843 DHX33Q9H6R0 707 aaKnown RBP24.9■■□□□ 1.58
PTPN18-205ENST00000428843 SUGCTQ9HAC7 445 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms