RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 RSPH3Q86UC2 560 aa16.28■□□□□ 0.2
SGCE-204ENST00000428696 SERINC5Q86VE9 423 aa16.28■□□□□ 0.2
SGCE-204ENST00000428696 TMEM199Q8N511 208 aa16.28■□□□□ 0.2
SGCE-204ENST00000428696 NEK9Q8TD19 979 aa16.28■□□□□ 0.2
SGCE-204ENST00000428696 WNT8BQ93098 351 aa16.28■□□□□ 0.2
SGCE-204ENST00000428696 SCLYQ96I15 445 aa16.28■□□□□ 0.2
SGCE-204ENST00000428696 CDK5RAP3Q96JB5 506 aa16.28■□□□□ 0.2
SGCE-204ENST00000428696 CHAMP1Q96JM3 812 aa16.28■□□□□ 0.2
SGCE-204ENST00000428696 CLIC6Q96NY7 704 aa16.28■□□□□ 0.2
SGCE-204ENST00000428696 TUFT1Q9NNX1 390 aa16.28■□□□□ 0.2
SGCE-204ENST00000428696 CFAP45Q9UL16 551 aa16.28■□□□□ 0.2
SGCE-204ENST00000428696 KIAA1024Q9UPX6 916 aa16.28■□□□□ 0.2
SGCE-204ENST00000428696 GINS2Q9Y248 185 aa16.28■□□□□ 0.2
SGCE-204ENST00000428696 ATP6V1DQ9Y5K8 247 aa16.28■□□□□ 0.2
SGCE-204ENST00000428696 TNRC18O15417 2968 aaPredicted RBP16.28■□□□□ 0.2
SGCE-204ENST00000428696 SCN10AQ9Y5Y9 1956 aa16.28■□□□□ 0.2
SGCE-204ENST00000428696 SPATA31C1P0DKV0 1188 aa16.28■□□□□ 0.2
SGCE-204ENST00000428696 CKBP12277 381 aa16.28■□□□□ 0.2
SGCE-204ENST00000428696 GRIN1Q05586 938 aa16.28■□□□□ 0.2
SGCE-204ENST00000428696 SLC39A14Q15043 492 aa16.28■□□□□ 0.2
SGCE-204ENST00000428696 PTPAQ15257 358 aa16.28■□□□□ 0.2
SGCE-204ENST00000428696 EFCAB12Q6NXP0 572 aa16.28■□□□□ 0.2
SGCE-204ENST00000428696 DEFB128Q7Z7B8 93 aa16.28■□□□□ 0.2
SGCE-204ENST00000428696 C4orf19Q8IY42 314 aa16.28■□□□□ 0.2
SGCE-204ENST00000428696 LRRC71Q8N4P6 559 aa16.28■□□□□ 0.2
SGCE-204ENST00000428696 IGSF22Q8N9C0 903 aa16.28■□□□□ 0.2
SGCE-204ENST00000428696 ZNF579Q8NAF0 562 aaKnown RBP16.28■□□□□ 0.2
SGCE-204ENST00000428696 DHX38Q92620 1227 aaKnown RBP16.28■□□□□ 0.2
SGCE-204ENST00000428696 NACC1Q96RE7 527 aa16.28■□□□□ 0.2
SGCE-204ENST00000428696 CTAGE1Q96RT6 745 aa16.28■□□□□ 0.2
SGCE-204ENST00000428696 PPP1R16BQ96T49 567 aa16.28■□□□□ 0.2
SGCE-204ENST00000428696 POLR3CQ9BUI4 534 aaPredicted RBP16.28■□□□□ 0.2
SGCE-204ENST00000428696 STK24Q9Y6E0 443 aa16.28■□□□□ 0.2
SGCE-204ENST00000428696 SPTLC2O15270 562 aa16.27■□□□□ 0.19
SGCE-204ENST00000428696 SSBP05455 408 aaKnown RBP eCLIP16.27■□□□□ 0.19
SGCE-204ENST00000428696 CSF2RAP15509 400 aa16.27■□□□□ 0.19
SGCE-204ENST00000428696 RPA1P27694 616 aa16.27■□□□□ 0.19
SGCE-204ENST00000428696 MAGEA10P43363 369 aaPredicted RBP16.27■□□□□ 0.19
SGCE-204ENST00000428696 POLGP54098 1239 aaPredicted RBP16.27■□□□□ 0.19
SGCE-204ENST00000428696 ZNF618Q5T7W0 954 aa16.27■□□□□ 0.19
SGCE-204ENST00000428696 TAF2Q6P1X5 1199 aa16.27■□□□□ 0.19
SGCE-204ENST00000428696 NIFKQ9BYG3 293 aaKnown RBP16.27■□□□□ 0.19
SGCE-204ENST00000428696 CSRNP2Q9H175 543 aa16.27■□□□□ 0.19
SGCE-204ENST00000428696 CYP26B1Q9NR63 512 aa16.27■□□□□ 0.19
SGCE-204ENST00000428696 DDX19AQ9NUU7 478 aaKnown RBP16.27■□□□□ 0.19
SGCE-204ENST00000428696 AKT3Q9Y243 479 aa16.27■□□□□ 0.19
SGCE-204ENST00000428696 PCDHA2Q9Y5H9 948 aa16.27■□□□□ 0.19
SGCE-204ENST00000428696 COL1A2P08123 1366 aa16.26■□□□□ 0.19
SGCE-204ENST00000428696 RSPH10B2B2RC85 870 aa16.26■□□□□ 0.19
SGCE-204ENST00000428696 ZBTB42B2RXF5 422 aa16.26■□□□□ 0.19
SGCE-204ENST00000428696 RBAK-RBAKDNI3L0D1 243 aa16.26■□□□□ 0.19
SGCE-204ENST00000428696 MAGEB2O15479 319 aa16.26■□□□□ 0.19
SGCE-204ENST00000428696 STBD1O95210 358 aa16.26■□□□□ 0.19
SGCE-204ENST00000428696 RSPH10BP0C881 870 aa16.26■□□□□ 0.19
SGCE-204ENST00000428696 ACRP10323 421 aa16.26■□□□□ 0.19
SGCE-204ENST00000428696 SELPP16109 830 aa16.26■□□□□ 0.19
SGCE-204ENST00000428696 TMOD1P28289 359 aa16.26■□□□□ 0.19
SGCE-204ENST00000428696 LONP1P36776 959 aaKnown RBP16.26■□□□□ 0.19
SGCE-204ENST00000428696 ME1P48163 572 aa16.26■□□□□ 0.19
SGCE-204ENST00000428696 DNM2P50570 870 aa16.26■□□□□ 0.19
SGCE-204ENST00000428696 CLCN3P51790 818 aa16.26■□□□□ 0.19
SGCE-204ENST00000428696 ADAM17P78536 824 aa16.26■□□□□ 0.19
SGCE-204ENST00000428696 FPGSQ05932 587 aa16.26■□□□□ 0.19
SGCE-204ENST00000428696 MFSD5Q6N075 450 aa16.26■□□□□ 0.19
SGCE-204ENST00000428696 LRRC8DQ7L1W4 858 aa16.26■□□□□ 0.19
SGCE-204ENST00000428696 MAEAQ7L5Y9 396 aa16.26■□□□□ 0.19
SGCE-204ENST00000428696 CABP7Q86V35 215 aa16.26■□□□□ 0.19
SGCE-204ENST00000428696 KRI1Q8N9T8 703 aaKnown RBP16.26■□□□□ 0.19
SGCE-204ENST00000428696 LINC00301Q8NCQ3 95 aa16.26■□□□□ 0.19
SGCE-204ENST00000428696 CAGE1Q8TC20 777 aa16.26■□□□□ 0.19
SGCE-204ENST00000428696 ZNF668Q96K58 619 aaPredicted RBP16.26■□□□□ 0.19
SGCE-204ENST00000428696 UBE2OQ9C0C9 1292 aaKnown RBP16.26■□□□□ 0.19
SGCE-204ENST00000428696 DNM3Q9UQ16 869 aa16.26■□□□□ 0.19
SGCE-204ENST00000428696 SRPRBQ9Y5M8 271 aaKnown RBP16.26■□□□□ 0.19
SGCE-204ENST00000428696 MBLAC1A4D2B0 266 aaPredicted RBP16.25■□□□□ 0.19
SGCE-204ENST00000428696 ARHGEF35A5YM69 484 aa16.25■□□□□ 0.19
SGCE-204ENST00000428696 M0QZ92 97 aa16.25■□□□□ 0.19
SGCE-204ENST00000428696 C22orf31O95567 290 aa16.25■□□□□ 0.19
SGCE-204ENST00000428696 IQCF3P0C7M6 154 aa16.25■□□□□ 0.19
SGCE-204ENST00000428696 HOXC8P31273 242 aa16.25■□□□□ 0.19
SGCE-204ENST00000428696 NASPP49321 788 aaPredicted RBP16.25■□□□□ 0.19
SGCE-204ENST00000428696 KRT85P78386 507 aa16.25■□□□□ 0.19
SGCE-204ENST00000428696 ECM1Q16610 540 aa16.25■□□□□ 0.19
SGCE-204ENST00000428696 CHRDL2Q6WN34 429 aa16.25■□□□□ 0.19
SGCE-204ENST00000428696 SLC7A3Q8WY07 619 aa16.25■□□□□ 0.19
SGCE-204ENST00000428696 CALML4Q96GE6 196 aa16.25■□□□□ 0.19
SGCE-204ENST00000428696 AK8Q96MA6 479 aa16.25■□□□□ 0.19
SGCE-204ENST00000428696 SCLT1Q96NL6 688 aa16.25■□□□□ 0.19
SGCE-204ENST00000428696 PANK2Q9BZ23 570 aa16.25■□□□□ 0.19
SGCE-204ENST00000428696 WNT8AQ9H1J5 351 aa16.25■□□□□ 0.19
SGCE-204ENST00000428696 FBXO2Q9UK22 296 aaPredicted RBP16.25■□□□□ 0.19
SGCE-204ENST00000428696 SMIM35A0A1B0GVV1 85 aa16.24■□□□□ 0.19
SGCE-204ENST00000428696 PITPNM1O00562 1244 aa16.24■□□□□ 0.19
SGCE-204ENST00000428696 VTNP04004 478 aa16.24■□□□□ 0.19
SGCE-204ENST00000428696 TXLNAP40222 546 aa16.24■□□□□ 0.19
SGCE-204ENST00000428696 DHX8Q14562 1220 aaKnown RBP16.24■□□□□ 0.19
SGCE-204ENST00000428696 IER5Q5VY09 327 aa16.24■□□□□ 0.19
SGCE-204ENST00000428696 ATL3Q6DD88 541 aa16.24■□□□□ 0.19
SGCE-204ENST00000428696 TMEM143Q96AN5 459 aa16.24■□□□□ 0.19
SGCE-204ENST00000428696 EPSTI1Q96J88 318 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms