RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 GUCD1Q96NT3 240 aa29.7■■■□□ 2.35
CDK9-202ENST00000421939 IFIH1Q9BYX4 1025 aaKnown RBP29.7■■■□□ 2.35
CDK9-202ENST00000421939 PTPRSQ13332 1948 aa29.7■■■□□ 2.34
CDK9-202ENST00000421939 MICAL3Q7RTP6 2002 aa29.69■■■□□ 2.34
CDK9-202ENST00000421939 TMEM62Q0P6H9 643 aa29.69■■■□□ 2.34
CDK9-202ENST00000421939 MKRN4PQ13434 485 aaPredicted RBP29.69■■■□□ 2.34
CDK9-202ENST00000421939 LPIN1Q14693 890 aa29.69■■■□□ 2.34
CDK9-202ENST00000421939 FBXO47Q5MNV8 452 aa29.69■■■□□ 2.34
CDK9-202ENST00000421939 NME8Q8N427 588 aa29.69■■■□□ 2.34
CDK9-202ENST00000421939 BANK1Q8NDB2 785 aa29.69■■■□□ 2.34
CDK9-202ENST00000421939 NKX2-4Q9H2Z4 354 aa29.69■■■□□ 2.34
CDK9-202ENST00000421939 ZNF576Q9H609 170 aa29.69■■■□□ 2.34
CDK9-202ENST00000421939 NOSTRINQ8IVI9 506 aa29.68■■■□□ 2.34
CDK9-202ENST00000421939 KIAA0319LQ8IZA0 1049 aa29.68■■■□□ 2.34
CDK9-202ENST00000421939 SEPT9Q9UHD8 586 aaPredicted RBP29.68■■■□□ 2.34
CDK9-202ENST00000421939 MAGEB2O15479 319 aa29.67■■■□□ 2.34
CDK9-202ENST00000421939 MYOGP15173 224 aa29.67■■■□□ 2.34
CDK9-202ENST00000421939 ATP2B1P20020 1258 aa29.67■■■□□ 2.34
CDK9-202ENST00000421939 PSMC5P62195 406 aa29.67■■■□□ 2.34
CDK9-202ENST00000421939 SPIRE1Q08AE8 756 aa29.67■■■□□ 2.34
CDK9-202ENST00000421939 XKR3Q5GH77 459 aa29.67■■■□□ 2.34
CDK9-202ENST00000421939 NCAPH2Q6IBW4 605 aa29.67■■■□□ 2.34
CDK9-202ENST00000421939 TSHZ1Q6ZSZ6 1077 aa29.67■■■□□ 2.34
CDK9-202ENST00000421939 KIF28PB7ZC32 967 aa29.66■■■□□ 2.34
CDK9-202ENST00000421939 METTL13Q8N6R0 699 aa29.66■■■□□ 2.34
CDK9-202ENST00000421939 CELF4Q9BZC1 486 aaKnown RBP29.66■■■□□ 2.34
CDK9-202ENST00000421939 SLC28A3Q9HAS3 691 aa29.66■■■□□ 2.34
CDK9-202ENST00000421939 CHD7Q9P2D1 2997 aa29.66■■■□□ 2.34
CDK9-202ENST00000421939 KDM3AQ9Y4C1 1321 aa29.66■■■□□ 2.34
CDK9-202ENST00000421939 GJB2P29033 226 aa29.65■■■□□ 2.34
CDK9-202ENST00000421939 MCM7P33993 719 aa29.65■■■□□ 2.34
CDK9-202ENST00000421939 QARSP47897 775 aaKnown RBP29.65■■■□□ 2.34
CDK9-202ENST00000421939 EPHA7Q15375 998 aa29.65■■■□□ 2.34
CDK9-202ENST00000421939 LIN28BQ6ZN17 250 aaKnown RBP eCLIP29.65■■■□□ 2.34
CDK9-202ENST00000421939 TMCO2Q7Z6W1 182 aaPredicted RBP29.65■■■□□ 2.34
CDK9-202ENST00000421939 NIFKQ9BYG3 293 aaKnown RBP29.65■■■□□ 2.34
CDK9-202ENST00000421939 STXBP5LQ9Y2K9 1186 aa29.65■■■□□ 2.34
CDK9-202ENST00000421939 SQORQ9Y6N5 450 aa29.65■■■□□ 2.34
CDK9-202ENST00000421939 EVPLQ92817 2033 aa29.65■■■□□ 2.34
CDK9-202ENST00000421939 COL6A3P12111 3177 aa29.64■■■□□ 2.34
CDK9-202ENST00000421939 DKC1O60832 514 aaKnown RBP eCLIP29.64■■■□□ 2.34
CDK9-202ENST00000421939 STBD1O95210 358 aa29.64■■■□□ 2.34
CDK9-202ENST00000421939 AMHP03971 560 aa29.64■■■□□ 2.34
CDK9-202ENST00000421939 P4HBP07237 508 aaKnown RBP29.64■■■□□ 2.34
CDK9-202ENST00000421939 CLCN3P51790 818 aa29.64■■■□□ 2.34
CDK9-202ENST00000421939 ORC2Q13416 577 aaPredicted RBP29.64■■■□□ 2.34
CDK9-202ENST00000421939 TARBP2Q15633 366 aaKnown RBP29.64■■■□□ 2.34
CDK9-202ENST00000421939 PPP2R2DQ66LE6 453 aa29.64■■■□□ 2.34
CDK9-202ENST00000421939 USP38Q8NB14 1042 aa29.64■■■□□ 2.34
CDK9-202ENST00000421939 MTMR9Q96QG7 549 aa29.64■■■□□ 2.34
CDK9-202ENST00000421939 CDX2Q99626 313 aaPredicted RBP29.64■■■□□ 2.34
CDK9-202ENST00000421939 PCDHA12Q9UN75 941 aa29.64■■■□□ 2.34
CDK9-202ENST00000421939 SMC3Q9UQE7 1217 aa29.64■■■□□ 2.34
CDK9-202ENST00000421939 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.64■■■□□ 2.34
CDK9-202ENST00000421939 TMEM150BA6NC51 233 aa29.63■■■□□ 2.33
CDK9-202ENST00000421939 TLL1O43897 1013 aa29.63■■■□□ 2.33
CDK9-202ENST00000421939 CA3P07451 260 aa29.63■■■□□ 2.33
CDK9-202ENST00000421939 U2AF2P26368 475 aaKnown RBP eCLIP29.63■■■□□ 2.33
CDK9-202ENST00000421939 TRAPPC10P48553 1259 aa29.63■■■□□ 2.33
CDK9-202ENST00000421939 TBC1D8BQ0IIM8 1120 aa29.63■■■□□ 2.33
CDK9-202ENST00000421939 GRIN2CQ14957 1233 aa29.63■■■□□ 2.33
CDK9-202ENST00000421939 MTERF2Q49AM1 385 aa29.63■■■□□ 2.33
CDK9-202ENST00000421939 MYOCDQ8IZQ8 938 aa29.63■■■□□ 2.33
CDK9-202ENST00000421939 LINC01465Q8N7H1 131 aa29.63■■■□□ 2.33
CDK9-202ENST00000421939 TMEM60Q9H2L4 133 aa29.63■■■□□ 2.33
CDK9-202ENST00000421939 TTC12Q9H892 705 aaPredicted RBP29.63■■■□□ 2.33
CDK9-202ENST00000421939 AGO3Q9H9G7 860 aaKnown RBP29.63■■■□□ 2.33
CDK9-202ENST00000421939 NOL7Q9UMY1 257 aaKnown RBP29.63■■■□□ 2.33
CDK9-202ENST00000421939 GJB5O95377 273 aa29.62■■■□□ 2.33
CDK9-202ENST00000421939 TMOD1P28289 359 aa29.62■■■□□ 2.33
CDK9-202ENST00000421939 CD52P31358 61 aa29.62■■■□□ 2.33
CDK9-202ENST00000421939 TXKP42681 527 aa29.62■■■□□ 2.33
CDK9-202ENST00000421939 TTC38Q5R3I4 469 aa29.62■■■□□ 2.33
CDK9-202ENST00000421939 EFCAB12Q6NXP0 572 aa29.62■■■□□ 2.33
CDK9-202ENST00000421939 LRRC71Q8N4P6 559 aa29.62■■■□□ 2.33
CDK9-202ENST00000421939 MAP7D2Q96T17 732 aa29.62■■■□□ 2.33
CDK9-202ENST00000421939 LXNQ9BS40 222 aa29.62■■■□□ 2.33
CDK9-202ENST00000421939 ZBED2Q9BTP6 218 aa29.62■■■□□ 2.33
CDK9-202ENST00000421939 GINS2Q9Y248 185 aa29.62■■■□□ 2.33
CDK9-202ENST00000421939 LOC101059915A0A1B0GWI6 518 aaPredicted RBP29.61■■■□□ 2.33
CDK9-202ENST00000421939 DDX11L8A8MPP1 907 aa29.61■■■□□ 2.33
CDK9-202ENST00000421939 VTNP04004 478 aa29.61■■■□□ 2.33
CDK9-202ENST00000421939 ANO5Q75V66 913 aa29.61■■■□□ 2.33
CDK9-202ENST00000421939 RGL1Q9NZL6 768 aa29.61■■■□□ 2.33
CDK9-202ENST00000421939 WRAP73Q9P2S5 460 aaPredicted RBP29.61■■■□□ 2.33
CDK9-202ENST00000421939 AKT3Q9Y243 479 aa29.61■■■□□ 2.33
CDK9-202ENST00000421939 PAK2Q13177 524 aa29.6■■■□□ 2.33
CDK9-202ENST00000421939 ZNF174Q15697 407 aa29.6■■■□□ 2.33
CDK9-202ENST00000421939 PLA2G4FQ68DD2 849 aa29.6■■■□□ 2.33
CDK9-202ENST00000421939 FAM117BQ6P1L5 589 aa29.6■■■□□ 2.33
CDK9-202ENST00000421939 MYLIPQ8WY64 445 aa29.6■■■□□ 2.33
CDK9-202ENST00000421939 DYDC2Q96IM9 177 aa29.6■■■□□ 2.33
CDK9-202ENST00000421939 CEP89Q96ST8 783 aa29.6■■■□□ 2.33
CDK9-202ENST00000421939 PPP1R16BQ96T49 567 aa29.6■■■□□ 2.33
CDK9-202ENST00000421939 LOXHD1Q8IVV2 1947 aa29.6■■■□□ 2.33
CDK9-202ENST00000421939 CYP4A11Q02928 519 aa29.59■■■□□ 2.33
CDK9-202ENST00000421939 CUL4AQ13619 759 aa29.59■■■□□ 2.33
CDK9-202ENST00000421939 KIZQ2M2Z5 673 aa29.59■■■□□ 2.33
CDK9-202ENST00000421939 C4orf19Q8IY42 314 aa29.59■■■□□ 2.33
CDK9-202ENST00000421939 RAD9AQ99638 391 aa29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms