RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 LAMC3Q9Y6N6 1575 aa13.24□□□□□ -0.29
CLCN4-203ENST00000421085 MED7O43513 233 aa13.23□□□□□ -0.29
CLCN4-203ENST00000421085 PPP1R37O75864 691 aa13.23□□□□□ -0.29
CLCN4-203ENST00000421085 HOXA7P31268 230 aaPredicted RBP13.23□□□□□ -0.29
CLCN4-203ENST00000421085 DLGAP5Q15398 846 aa13.23□□□□□ -0.29
CLCN4-203ENST00000421085 DIAPH2O60879 1101 aa13.23□□□□□ -0.29
CLCN4-203ENST00000421085 MTF1Q14872 753 aa13.23□□□□□ -0.29
CLCN4-203ENST00000421085 GPATCH4Q5T3I0 446 aaKnown RBP13.23□□□□□ -0.29
CLCN4-203ENST00000421085 PRMT1Q99873 361 aaKnown RBP13.23□□□□□ -0.29
CLCN4-203ENST00000421085 ANAPC7Q9UJX3 599 aa13.23□□□□□ -0.29
CLCN4-203ENST00000421085 TRAF3IP3Q9Y228 551 aa13.23□□□□□ -0.29
CLCN4-203ENST00000421085 ERVV-2B6SEH9 535 aa13.23□□□□□ -0.29
CLCN4-203ENST00000421085 PI4K2BG5E9Z4 385 aa13.23□□□□□ -0.29
CLCN4-203ENST00000421085 CAV1Q03135 178 aa13.23□□□□□ -0.29
CLCN4-203ENST00000421085 FOXD4Q12950 439 aaPredicted RBP13.23□□□□□ -0.29
CLCN4-203ENST00000421085 OR6B2Q6IFH4 312 aa13.23□□□□□ -0.29
CLCN4-203ENST00000421085 WDR64B1ANS9 1081 aa13.23□□□□□ -0.29
CLCN4-203ENST00000421085 H3BRJ5 948 aa13.23□□□□□ -0.29
CLCN4-203ENST00000421085 LIFRP42702 1097 aa13.23□□□□□ -0.29
CLCN4-203ENST00000421085 TRIM59Q8IWR1 403 aa13.23□□□□□ -0.29
CLCN4-203ENST00000421085 PSPC1Q8WXF1 523 aaKnown RBP13.23□□□□□ -0.29
CLCN4-203ENST00000421085 NXF1Q9UBU9 619 aaKnown RBP13.23□□□□□ -0.29
CLCN4-203ENST00000421085 TTC26A0AVF1 554 aa13.23□□□□□ -0.29
CLCN4-203ENST00000421085 STXBP3O00186 592 aa13.23□□□□□ -0.29
CLCN4-203ENST00000421085 EIF3HO15372 352 aaKnown RBP eCLIP13.23□□□□□ -0.29
CLCN4-203ENST00000421085 SYF2O95926 243 aaKnown RBP13.23□□□□□ -0.29
CLCN4-203ENST00000421085 SLC4A1P02730 911 aa13.23□□□□□ -0.29
CLCN4-203ENST00000421085 YWHAHQ04917 246 aaPredicted RBP13.23□□□□□ -0.29
CLCN4-203ENST00000421085 CLEC17AQ6ZS10 378 aa13.23□□□□□ -0.29
CLCN4-203ENST00000421085 LRRC1Q9BTT6 524 aa13.23□□□□□ -0.29
CLCN4-203ENST00000421085 PHKG2P15735 406 aa13.22□□□□□ -0.29
CLCN4-203ENST00000421085 LARGE2Q8N3Y3 721 aa13.22□□□□□ -0.29
CLCN4-203ENST00000421085 SH2D3CQ8N5H7 860 aa13.22□□□□□ -0.29
CLCN4-203ENST00000421085 ZNF579Q8NAF0 562 aaKnown RBP13.22□□□□□ -0.29
CLCN4-203ENST00000421085 STAMBPL1Q96FJ0 436 aa13.22□□□□□ -0.29
CLCN4-203ENST00000421085 CYP4F11Q9HBI6 524 aa13.22□□□□□ -0.29
CLCN4-203ENST00000421085 GOLGA8IPA6NC78 632 aa13.22□□□□□ -0.29
CLCN4-203ENST00000421085 GOLGA8JA6NMD2 632 aa13.22□□□□□ -0.29
CLCN4-203ENST00000421085 UBE2SQ16763 222 aa13.22□□□□□ -0.29
CLCN4-203ENST00000421085 TTC25Q96NG3 672 aa13.22□□□□□ -0.29
CLCN4-203ENST00000421085 TTC7AQ9ULT0 858 aaPredicted RBP13.22□□□□□ -0.29
CLCN4-203ENST00000421085 SNX5Q9Y5X3 404 aa13.22□□□□□ -0.29
CLCN4-203ENST00000421085 IGBP1P78318 339 aa13.22□□□□□ -0.29
CLCN4-203ENST00000421085 TFAMQ00059 246 aaKnown RBP13.22□□□□□ -0.29
CLCN4-203ENST00000421085 ACAD11Q709F0 780 aa13.22□□□□□ -0.29
CLCN4-203ENST00000421085 SPATA4Q8NEY3 305 aa13.22□□□□□ -0.29
CLCN4-203ENST00000421085 ZFXP17010 805 aaPredicted RBP13.22□□□□□ -0.29
CLCN4-203ENST00000421085 KLHL38Q2WGJ6 581 aa13.22□□□□□ -0.29
CLCN4-203ENST00000421085 KLC3Q6P597 504 aa13.22□□□□□ -0.29
CLCN4-203ENST00000421085 CCT8L2Q96SF2 557 aa13.22□□□□□ -0.29
CLCN4-203ENST00000421085 PALMDQ9NP74 551 aa13.22□□□□□ -0.29
CLCN4-203ENST00000421085 NOC2LQ9Y3T9 749 aaKnown RBP13.22□□□□□ -0.29
CLCN4-203ENST00000421085 GCC2Q8IWJ2 1684 aa13.22□□□□□ -0.29
CLCN4-203ENST00000421085 RNF103-CHMP3A0A140T963 221 aa13.22□□□□□ -0.29
CLCN4-203ENST00000421085 PLEKHA8P1O95397 391 aa13.22□□□□□ -0.29
CLCN4-203ENST00000421085 ARHGDIAP52565 204 aa13.22□□□□□ -0.29
CLCN4-203ENST00000421085 PSMC1P62191 440 aaKnown RBP13.22□□□□□ -0.29
CLCN4-203ENST00000421085 SLC30A9Q6PML9 568 aa13.22□□□□□ -0.29
CLCN4-203ENST00000421085 UNC13DQ70J99 1090 aa13.22□□□□□ -0.29
CLCN4-203ENST00000421085 RAPGEF5Q92565 580 aa13.22□□□□□ -0.29
CLCN4-203ENST00000421085 EXT2Q93063 718 aa13.22□□□□□ -0.29
CLCN4-203ENST00000421085 WDR11Q9BZH6 1224 aa13.22□□□□□ -0.29
CLCN4-203ENST00000421085 CTTNBP2Q8WZ74 1663 aa13.22□□□□□ -0.29
CLCN4-203ENST00000421085 ZNF185O15231 689 aa13.22□□□□□ -0.29
CLCN4-203ENST00000421085 KRT38O76015 456 aa13.22□□□□□ -0.29
CLCN4-203ENST00000421085 TTLL1O95922 423 aa13.22□□□□□ -0.29
CLCN4-203ENST00000421085 GPC5P78333 572 aa13.22□□□□□ -0.29
CLCN4-203ENST00000421085 USP17L2Q6R6M4 530 aa13.22□□□□□ -0.29
CLCN4-203ENST00000421085 SUCLA2Q9P2R7 463 aaPredicted RBP13.22□□□□□ -0.29
CLCN4-203ENST00000421085 STRIP2Q9ULQ0 834 aa13.22□□□□□ -0.29
CLCN4-203ENST00000421085 LPXNO60711 386 aa13.21□□□□□ -0.29
CLCN4-203ENST00000421085 HABP4Q5JVS0 413 aaKnown RBP13.21□□□□□ -0.29
CLCN4-203ENST00000421085 E4F1Q66K89 784 aaPredicted RBP13.21□□□□□ -0.29
CLCN4-203ENST00000421085 SPICE1Q8N0Z3 855 aa13.21□□□□□ -0.29
CLCN4-203ENST00000421085 BTBD6Q96KE9 485 aa13.21□□□□□ -0.29
CLCN4-203ENST00000421085 ORAI2Q96SN7 254 aa13.21□□□□□ -0.29
CLCN4-203ENST00000421085 IRX2Q9BZI1 471 aaPredicted RBP13.21□□□□□ -0.29
CLCN4-203ENST00000421085 CCDC90BQ9GZT6 254 aa13.21□□□□□ -0.29
CLCN4-203ENST00000421085 BATF3Q9NR55 127 aa13.21□□□□□ -0.29
CLCN4-203ENST00000421085 CNOT8Q9UFF9 292 aaKnown RBP13.21□□□□□ -0.29
CLCN4-203ENST00000421085 TCP11X1B4DZS4 312 aa13.21□□□□□ -0.29
CLCN4-203ENST00000421085 E2F6O75461 281 aa13.21□□□□□ -0.29
CLCN4-203ENST00000421085 PSMA2P25787 234 aa13.21□□□□□ -0.29
CLCN4-203ENST00000421085 CCZ1BP86790 482 aa13.21□□□□□ -0.29
CLCN4-203ENST00000421085 CCZ1P86791 482 aaPredicted RBP13.21□□□□□ -0.29
CLCN4-203ENST00000421085 HOOK2Q96ED9 719 aa13.21□□□□□ -0.29
CLCN4-203ENST00000421085 KLC2Q9H0B6 622 aa13.21□□□□□ -0.29
CLCN4-203ENST00000421085 L3MBTL1Q9Y468 752 aa13.21□□□□□ -0.29
CLCN4-203ENST00000421085 ZNF608Q9ULD9 1512 aaPredicted RBP13.21□□□□□ -0.29
CLCN4-203ENST00000421085 SFI1A8K8P3 1242 aa13.21□□□□□ -0.29
CLCN4-203ENST00000421085 hCG_1984214I3L0E3 225 aa13.21□□□□□ -0.29
CLCN4-203ENST00000421085 ZRANB2O95218 330 aaKnown RBP eCLIP13.21□□□□□ -0.29
CLCN4-203ENST00000421085 CHEK2O96017 543 aa13.21□□□□□ -0.29
CLCN4-203ENST00000421085 ZSCAN20P17040 1043 aaPredicted RBP13.21□□□□□ -0.29
CLCN4-203ENST00000421085 ABCB5Q2M3G0 1257 aa13.21□□□□□ -0.29
CLCN4-203ENST00000421085 SPATA21Q7Z572 469 aa13.21□□□□□ -0.29
CLCN4-203ENST00000421085 ZNF713Q8N859 430 aaPredicted RBP13.21□□□□□ -0.29
CLCN4-203ENST00000421085 ATP6V0A1Q93050 837 aa13.21□□□□□ -0.29
CLCN4-203ENST00000421085 GRAMD1AQ96CP6 724 aa13.21□□□□□ -0.29
CLCN4-203ENST00000421085 APOL6Q9BWW8 343 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms