RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 TMX1Q9H3N1 280 aa10.49□□□□□ -0.73
TRIM39-206ENST00000420746 SFXN1Q9H9B4 322 aa10.49□□□□□ -0.73
TRIM39-206ENST00000420746 CA14Q9ULX7 337 aa10.49□□□□□ -0.73
TRIM39-206ENST00000420746 SUPT16HQ9Y5B9 1047 aaKnown RBP10.49□□□□□ -0.73
TRIM39-206ENST00000420746 TRPV2Q9Y5S1 764 aa10.49□□□□□ -0.73
TRIM39-206ENST00000420746 KDM3AQ9Y4C1 1321 aa10.49□□□□□ -0.73
TRIM39-206ENST00000420746 GCN1Q92616 2671 aaKnown RBP10.48□□□□□ -0.73
TRIM39-206ENST00000420746 RNF113AO15541 343 aaKnown RBP10.48□□□□□ -0.73
TRIM39-206ENST00000420746 RANBP6O60518 1105 aaKnown RBP10.48□□□□□ -0.73
TRIM39-206ENST00000420746 FOXD2O60548 495 aaPredicted RBP10.48□□□□□ -0.73
TRIM39-206ENST00000420746 FGRP09769 529 aa10.48□□□□□ -0.73
TRIM39-206ENST00000420746 MYCLP12524 364 aaPredicted RBP10.48□□□□□ -0.73
TRIM39-206ENST00000420746 GLULP15104 373 aa10.48□□□□□ -0.73
TRIM39-206ENST00000420746 STARD6P59095 220 aa10.48□□□□□ -0.73
TRIM39-206ENST00000420746 PPFIA1Q13136 1202 aa10.48□□□□□ -0.73
TRIM39-206ENST00000420746 PGM5Q15124 567 aa10.48□□□□□ -0.73
TRIM39-206ENST00000420746 LETM2Q2VYF4 491 aa10.48□□□□□ -0.73
TRIM39-206ENST00000420746 GNPTABQ3T906 1256 aa10.48□□□□□ -0.73
TRIM39-206ENST00000420746 KCNT2Q6UVM3 1135 aa10.48□□□□□ -0.73
TRIM39-206ENST00000420746 C15orf39Q6ZRI6 1047 aa10.48□□□□□ -0.73
TRIM39-206ENST00000420746 SLC24A5Q71RS6 500 aa10.48□□□□□ -0.73
TRIM39-206ENST00000420746 C12orf76Q8N812 135 aaPredicted RBP10.48□□□□□ -0.73
TRIM39-206ENST00000420746 GLG1Q92896 1179 aa10.48□□□□□ -0.73
TRIM39-206ENST00000420746 TTC14Q96N46 770 aa10.48□□□□□ -0.73
TRIM39-206ENST00000420746 ZNF558Q96NG5 402 aa10.48□□□□□ -0.73
TRIM39-206ENST00000420746 FAM126AQ9BYI3 521 aaPredicted RBP10.48□□□□□ -0.73
TRIM39-206ENST00000420746 ELAC1Q9H777 363 aaKnown RBP10.48□□□□□ -0.73
TRIM39-206ENST00000420746 SPG21Q9NZD8 308 aa10.48□□□□□ -0.73
TRIM39-206ENST00000420746 EPS15L1Q9UBC2 864 aa10.48□□□□□ -0.73
TRIM39-206ENST00000420746 ANAPC4Q9UJX5 808 aa10.48□□□□□ -0.73
TRIM39-206ENST00000420746 ZMIZ1Q9ULJ6 1067 aa10.48□□□□□ -0.73
TRIM39-206ENST00000420746 IRAK3Q9Y616 596 aa10.48□□□□□ -0.73
TRIM39-206ENST00000420746 FNDC1Q4ZHG4 1894 aaPredicted RBP10.48□□□□□ -0.73
TRIM39-206ENST00000420746 LOXHD1Q8IVV2 1947 aa10.47□□□□□ -0.73
TRIM39-206ENST00000420746 M0R2C6 588 aa10.47□□□□□ -0.73
TRIM39-206ENST00000420746 HOXA2O43364 376 aa10.47□□□□□ -0.73
TRIM39-206ENST00000420746 STAM2O75886 525 aa10.47□□□□□ -0.73
TRIM39-206ENST00000420746 CFBP00751 764 aa10.47□□□□□ -0.73
TRIM39-206ENST00000420746 CCND2P30279 289 aa10.47□□□□□ -0.73
TRIM39-206ENST00000420746 GRIK4Q16099 956 aa10.47□□□□□ -0.73
TRIM39-206ENST00000420746 MARCH8Q5T0T0 291 aa10.47□□□□□ -0.73
TRIM39-206ENST00000420746 FAM102BQ5T8I3 360 aa10.47□□□□□ -0.73
TRIM39-206ENST00000420746 CABP7Q86V35 215 aa10.47□□□□□ -0.73
TRIM39-206ENST00000420746 PPFIBP1Q86W92 1011 aa10.47□□□□□ -0.73
TRIM39-206ENST00000420746 SLC44A3Q8N4M1 653 aa10.47□□□□□ -0.73
TRIM39-206ENST00000420746 SLC22A17Q8WUG5 538 aa10.47□□□□□ -0.73
TRIM39-206ENST00000420746 SHDQ96IW2 340 aa10.47□□□□□ -0.73
TRIM39-206ENST00000420746 BCO2Q9BYV7 579 aa10.47□□□□□ -0.73
TRIM39-206ENST00000420746 RHOBTB2Q9BYZ6 727 aa10.47□□□□□ -0.73
TRIM39-206ENST00000420746 OSBPL6Q9BZF3 934 aa10.47□□□□□ -0.73
TRIM39-206ENST00000420746 TMEM117Q9H0C3 514 aa10.47□□□□□ -0.73
TRIM39-206ENST00000420746 SLC2A4RGQ9NR83 387 aa10.47□□□□□ -0.73
TRIM39-206ENST00000420746 RGS18Q9NS28 235 aa10.47□□□□□ -0.73
TRIM39-206ENST00000420746 TMEM161AQ9NX61 479 aa10.47□□□□□ -0.73
TRIM39-206ENST00000420746 HCSTQ9UBK5 93 aa10.47□□□□□ -0.73
TRIM39-206ENST00000420746 CACNA1IQ9P0X4 2223 aa10.47□□□□□ -0.73
TRIM39-206ENST00000420746 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.46□□□□□ -0.73
TRIM39-206ENST00000420746 TMEM8BA6NDV4 472 aa10.46□□□□□ -0.73
TRIM39-206ENST00000420746 C9IYK1 514 aa10.46□□□□□ -0.73
TRIM39-206ENST00000420746 ODR4Q5SWX8 454 aa10.46□□□□□ -0.73
TRIM39-206ENST00000420746 N4BP2L1Q5TBK1 243 aaPredicted RBP10.46□□□□□ -0.73
TRIM39-206ENST00000420746 LAIR1Q6GTX8 287 aa10.46□□□□□ -0.73
TRIM39-206ENST00000420746 DCLRE1AQ6PJP8 1040 aa10.46□□□□□ -0.73
TRIM39-206ENST00000420746 LRSAM1Q6UWE0 723 aa10.46□□□□□ -0.73
TRIM39-206ENST00000420746 TMC5Q6UXY8 1006 aa10.46□□□□□ -0.73
TRIM39-206ENST00000420746 CYP26C1Q6V0L0 522 aa10.46□□□□□ -0.73
TRIM39-206ENST00000420746 CYFIP1Q7L576 1253 aa10.46□□□□□ -0.73
TRIM39-206ENST00000420746 ITPRIPQ8IWB1 547 aa10.46□□□□□ -0.73
TRIM39-206ENST00000420746 LRRC43Q8N309 656 aa10.46□□□□□ -0.73
TRIM39-206ENST00000420746 GPR152Q8TDT2 470 aa10.46□□□□□ -0.73
TRIM39-206ENST00000420746 STAMQ92783 540 aa10.46□□□□□ -0.73
TRIM39-206ENST00000420746 GPKOWQ92917 476 aaPredicted RBP eCLIP10.46□□□□□ -0.73
TRIM39-206ENST00000420746 INPP4AQ96PE3 977 aaPredicted RBP10.46□□□□□ -0.73
TRIM39-206ENST00000420746 SENP7Q9BQF6 1050 aa10.46□□□□□ -0.73
TRIM39-206ENST00000420746 ATP6V0A4Q9HBG4 840 aa10.46□□□□□ -0.73
TRIM39-206ENST00000420746 SPATA6Q9NWH7 488 aaPredicted RBP10.46□□□□□ -0.73
TRIM39-206ENST00000420746 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.46□□□□□ -0.73
TRIM39-206ENST00000420746 CARNS1A5YM72 827 aa10.45□□□□□ -0.74
TRIM39-206ENST00000420746 RRN3P2A6NIE6 340 aa10.45□□□□□ -0.74
TRIM39-206ENST00000420746 SPATA31C2B4DYI2 1134 aa10.45□□□□□ -0.74
TRIM39-206ENST00000420746 OPLAHO14841 1288 aa10.45□□□□□ -0.74
TRIM39-206ENST00000420746 FIBPO43427 364 aa10.45□□□□□ -0.74
TRIM39-206ENST00000420746 RETP07949 1114 aa10.45□□□□□ -0.74
TRIM39-206ENST00000420746 EPCAMP16422 314 aa10.45□□□□□ -0.74
TRIM39-206ENST00000420746 FAM189BP81408 668 aa10.45□□□□□ -0.74
TRIM39-206ENST00000420746 CSTF1Q05048 431 aaKnown RBP10.45□□□□□ -0.74
TRIM39-206ENST00000420746 SPEM2Q0P670 501 aa10.45□□□□□ -0.74
TRIM39-206ENST00000420746 PTPN14Q15678 1187 aa10.45□□□□□ -0.74
TRIM39-206ENST00000420746 QRICH1Q2TAL8 776 aa10.45□□□□□ -0.74
TRIM39-206ENST00000420746 UTP14CQ5TAP6 766 aaKnown RBP10.45□□□□□ -0.74
TRIM39-206ENST00000420746 KANK3Q6NY19 840 aa10.45□□□□□ -0.74
TRIM39-206ENST00000420746 UNQ6494/PRO21346Q6UXR6 183 aa10.45□□□□□ -0.74
TRIM39-206ENST00000420746 FTSJ3Q8IY81 847 aaKnown RBP10.45□□□□□ -0.74
TRIM39-206ENST00000420746 SLC39A11Q8N1S5 342 aa10.45□□□□□ -0.74
TRIM39-206ENST00000420746 NME8Q8N427 588 aa10.45□□□□□ -0.74
TRIM39-206ENST00000420746 TMEM87AQ8NBN3 555 aa10.45□□□□□ -0.74
TRIM39-206ENST00000420746 CMASQ8NFW8 434 aaPredicted RBP10.45□□□□□ -0.74
TRIM39-206ENST00000420746 IL31RAQ8NI17 732 aa10.45□□□□□ -0.74
TRIM39-206ENST00000420746 DDX23Q9BUQ8 820 aaKnown RBP10.45□□□□□ -0.74
TRIM39-206ENST00000420746 CELF4Q9BZC1 486 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms