RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 M0QZ92 97 aa12.12□□□□□ -0.47
RAPGEF1-205ENST00000419442 WEE2P0C1S8 567 aa12.12□□□□□ -0.47
RAPGEF1-205ENST00000419442 SDHBP21912 280 aa12.12□□□□□ -0.47
RAPGEF1-205ENST00000419442 PPM1AP35813 382 aa12.12□□□□□ -0.47
RAPGEF1-205ENST00000419442 FAM189BP81408 668 aa12.12□□□□□ -0.47
RAPGEF1-205ENST00000419442 TRAF1Q13077 416 aa12.12□□□□□ -0.47
RAPGEF1-205ENST00000419442 ATAT1Q5SQI0 421 aa12.12□□□□□ -0.47
RAPGEF1-205ENST00000419442 ZC3H14Q6PJT7 736 aaKnown RBP12.12□□□□□ -0.47
RAPGEF1-205ENST00000419442 SLC24A5Q71RS6 500 aa12.12□□□□□ -0.47
RAPGEF1-205ENST00000419442 IQCA1Q86XH1 822 aa12.12□□□□□ -0.47
RAPGEF1-205ENST00000419442 SIX5Q8N196 739 aa12.12□□□□□ -0.47
RAPGEF1-205ENST00000419442 STAG2Q8N3U4 1231 aa12.12□□□□□ -0.47
RAPGEF1-205ENST00000419442 ENAHQ8N8S7 591 aaPredicted RBP12.12□□□□□ -0.47
RAPGEF1-205ENST00000419442 GIMAP8Q8ND71 665 aaPredicted RBP12.12□□□□□ -0.47
RAPGEF1-205ENST00000419442 ZBTB10Q96DT7 871 aa12.12□□□□□ -0.47
RAPGEF1-205ENST00000419442 DZANK1Q9NVP4 752 aa12.12□□□□□ -0.47
RAPGEF1-205ENST00000419442 DBR1Q9UK59 544 aaKnown RBP12.12□□□□□ -0.47
RAPGEF1-205ENST00000419442 CACNA1IQ9P0X4 2223 aa12.12□□□□□ -0.47
RAPGEF1-205ENST00000419442 GPR179Q6PRD1 2367 aa12.12□□□□□ -0.47
RAPGEF1-205ENST00000419442 ZFHX4Q86UP3 3567 aa12.11□□□□□ -0.47
RAPGEF1-205ENST00000419442 TRIM6-TRIM34B2RNG4 842 aa12.11□□□□□ -0.47
RAPGEF1-205ENST00000419442 SP9P0CG40 484 aa12.11□□□□□ -0.47
RAPGEF1-205ENST00000419442 INSRRP14616 1297 aa12.11□□□□□ -0.47
RAPGEF1-205ENST00000419442 KCNA2P16389 499 aa12.11□□□□□ -0.47
RAPGEF1-205ENST00000419442 MARK3P27448 753 aa12.11□□□□□ -0.47
RAPGEF1-205ENST00000419442 ATXN1P54253 815 aaKnown RBP12.11□□□□□ -0.47
RAPGEF1-205ENST00000419442 SP4Q02446 784 aa12.11□□□□□ -0.47
RAPGEF1-205ENST00000419442 SMC1AQ14683 1233 aaKnown RBP12.11□□□□□ -0.47
RAPGEF1-205ENST00000419442 SLC35G1Q2M3R5 365 aa12.11□□□□□ -0.47
RAPGEF1-205ENST00000419442 MCMDC2Q4G0Z9 681 aa12.11□□□□□ -0.47
RAPGEF1-205ENST00000419442 RARS2Q5T160 578 aaKnown RBP12.11□□□□□ -0.47
RAPGEF1-205ENST00000419442 KIAA0319Q5VV43 1072 aa12.11□□□□□ -0.47
RAPGEF1-205ENST00000419442 XRRA1Q6P2D8 792 aa12.11□□□□□ -0.47
RAPGEF1-205ENST00000419442 KCNT2Q6UVM3 1135 aa12.11□□□□□ -0.47
RAPGEF1-205ENST00000419442 LRRC55Q6ZSA7 311 aa12.11□□□□□ -0.47
RAPGEF1-205ENST00000419442 TMC7Q7Z402 723 aa12.11□□□□□ -0.47
RAPGEF1-205ENST00000419442 OTUD7AQ8TE49 926 aaPredicted RBP12.11□□□□□ -0.47
RAPGEF1-205ENST00000419442 SEPT1Q8WYJ6 367 aa12.11□□□□□ -0.47
RAPGEF1-205ENST00000419442 TMEM117Q9H0C3 514 aa12.11□□□□□ -0.47
RAPGEF1-205ENST00000419442 SMARCAD1Q9H4L7 1026 aa12.11□□□□□ -0.47
RAPGEF1-205ENST00000419442 ELAC1Q9H777 363 aaKnown RBP12.11□□□□□ -0.47
RAPGEF1-205ENST00000419442 TMEM161AQ9NX61 479 aa12.11□□□□□ -0.47
RAPGEF1-205ENST00000419442 RTEL1Q9NZ71 1219 aa12.11□□□□□ -0.47
RAPGEF1-205ENST00000419442 DLGAP2Q9P1A6 1054 aa12.11□□□□□ -0.47
RAPGEF1-205ENST00000419442 WNT16Q9UBV4 365 aa12.11□□□□□ -0.47
RAPGEF1-205ENST00000419442 PATJQ8NI35 1801 aa12.11□□□□□ -0.47
RAPGEF1-205ENST00000419442 SALL3Q9BXA9 1300 aa12.11□□□□□ -0.47
RAPGEF1-205ENST00000419442 EVPLQ92817 2033 aa12.1□□□□□ -0.47
RAPGEF1-205ENST00000419442 A0A0D9SFI3 127 aa12.1□□□□□ -0.47
RAPGEF1-205ENST00000419442 SMIM35A0A1B0GVV1 85 aa12.1□□□□□ -0.47
RAPGEF1-205ENST00000419442 KRBA1A5PL33 1030 aa12.1□□□□□ -0.47
RAPGEF1-205ENST00000419442 KLRF2D3W0D1 207 aa12.1□□□□□ -0.47
RAPGEF1-205ENST00000419442 ATP9AO75110 1047 aa12.1□□□□□ -0.47
RAPGEF1-205ENST00000419442 KRT76Q01546 638 aa12.1□□□□□ -0.47
RAPGEF1-205ENST00000419442 KRT17Q04695 432 aa12.1□□□□□ -0.47
RAPGEF1-205ENST00000419442 TBC1D8BQ0IIM8 1120 aa12.1□□□□□ -0.47
RAPGEF1-205ENST00000419442 TMEM62Q0P6H9 643 aa12.1□□□□□ -0.47
RAPGEF1-205ENST00000419442 TMEM266Q2M3C6 531 aa12.1□□□□□ -0.47
RAPGEF1-205ENST00000419442 PCNX4Q63HM2 1172 aa12.1□□□□□ -0.47
RAPGEF1-205ENST00000419442 TICAM2Q86XR7 235 aa12.1□□□□□ -0.47
RAPGEF1-205ENST00000419442 NME8Q8N427 588 aa12.1□□□□□ -0.47
RAPGEF1-205ENST00000419442 C12orf76Q8N812 135 aaPredicted RBP12.1□□□□□ -0.47
RAPGEF1-205ENST00000419442 SLC22A17Q8WUG5 538 aa12.1□□□□□ -0.47
RAPGEF1-205ENST00000419442 RIN2Q8WYP3 895 aaPredicted RBP12.1□□□□□ -0.47
RAPGEF1-205ENST00000419442 ACSF2Q96CM8 615 aaPredicted RBP12.1□□□□□ -0.47
RAPGEF1-205ENST00000419442 ZNF558Q96NG5 402 aa12.1□□□□□ -0.47
RAPGEF1-205ENST00000419442 ZSCAN10Q96SZ4 725 aaPredicted RBP12.1□□□□□ -0.47
RAPGEF1-205ENST00000419442 ADAM2Q99965 735 aa12.1□□□□□ -0.47
RAPGEF1-205ENST00000419442 HINFPQ9BQA5 517 aa12.1□□□□□ -0.47
RAPGEF1-205ENST00000419442 KCNK12Q9HB15 430 aa12.1□□□□□ -0.47
RAPGEF1-205ENST00000419442 ATP6V0A4Q9HBG4 840 aa12.1□□□□□ -0.47
RAPGEF1-205ENST00000419442 RNF19AQ9NV58 838 aa12.1□□□□□ -0.47
RAPGEF1-205ENST00000419442 FBXL21Q9UKT6 434 aa12.1□□□□□ -0.47
RAPGEF1-205ENST00000419442 NOC2LQ9Y3T9 749 aaKnown RBP12.1□□□□□ -0.47
RAPGEF1-205ENST00000419442 MIA3Q5JRA6 1907 aa12.09□□□□□ -0.47
RAPGEF1-205ENST00000419442 DOCK8Q8NF50 2099 aa12.09□□□□□ -0.47
RAPGEF1-205ENST00000419442 PALM3A6NDB9 673 aaPredicted RBP12.09□□□□□ -0.47
RAPGEF1-205ENST00000419442 ADRB1P08588 477 aa12.09□□□□□ -0.47
RAPGEF1-205ENST00000419442 FGFR1P11362 822 aa12.09□□□□□ -0.47
RAPGEF1-205ENST00000419442 IGBP1P78318 339 aa12.09□□□□□ -0.47
RAPGEF1-205ENST00000419442 NFX1Q12986 1120 aaKnown RBP12.09□□□□□ -0.47
RAPGEF1-205ENST00000419442 DSC3Q14574 896 aa12.09□□□□□ -0.47
RAPGEF1-205ENST00000419442 ODR4Q5SWX8 454 aa12.09□□□□□ -0.47
RAPGEF1-205ENST00000419442 KANK3Q6NY19 840 aa12.09□□□□□ -0.47
RAPGEF1-205ENST00000419442 OTOP3Q7RTS5 596 aa12.09□□□□□ -0.47
RAPGEF1-205ENST00000419442 ZNF589Q86UQ0 364 aaPredicted RBP12.09□□□□□ -0.47
RAPGEF1-205ENST00000419442 NLRX1Q86UT6 975 aa12.09□□□□□ -0.47
RAPGEF1-205ENST00000419442 SLC39A11Q8N1S5 342 aa12.09□□□□□ -0.47
RAPGEF1-205ENST00000419442 GPR161Q8N6U8 529 aaKnown RBP12.09□□□□□ -0.47
RAPGEF1-205ENST00000419442 FEZF2Q8TBJ5 459 aa12.09□□□□□ -0.47
RAPGEF1-205ENST00000419442 GLG1Q92896 1179 aa12.09□□□□□ -0.47
RAPGEF1-205ENST00000419442 EVI5LQ96CN4 794 aa12.09□□□□□ -0.47
RAPGEF1-205ENST00000419442 GPRASP2Q96D09 838 aa12.09□□□□□ -0.47
RAPGEF1-205ENST00000419442 BORCS6Q96GS4 357 aa12.09□□□□□ -0.47
RAPGEF1-205ENST00000419442 FAM227BQ96M60 508 aa12.09□□□□□ -0.47
RAPGEF1-205ENST00000419442 CASD1Q96PB1 797 aa12.09□□□□□ -0.47
RAPGEF1-205ENST00000419442 PCYT2Q99447 389 aa12.09□□□□□ -0.47
RAPGEF1-205ENST00000419442 RIOX1Q9H6W3 641 aa12.09□□□□□ -0.47
RAPGEF1-205ENST00000419442 SPG21Q9NZD8 308 aa12.09□□□□□ -0.47
RAPGEF1-205ENST00000419442 IGSF9Q9P2J2 1179 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms