RNA–Protein interactions for RNA: ENST00000419023.2

VPS45-203, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 3

Gene VPS45, Length 977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-203ENST00000419023 MAPKAPK2P49137 400 aa7.24□□□□□ -1.25
VPS45-203ENST00000419023 PRR5P85299 388 aa7.24□□□□□ -1.25
VPS45-203ENST00000419023 RBM10P98175 930 aaKnown RBP7.24□□□□□ -1.25
VPS45-203ENST00000419023 ZC3H14Q6PJT7 736 aaKnown RBP7.24□□□□□ -1.25
VPS45-203ENST00000419023 LBX2Q6XYB7 198 aa7.24□□□□□ -1.25
VPS45-203ENST00000419023 IFNL3Q8IZI9 196 aa7.24□□□□□ -1.25
VPS45-203ENST00000419023 Q8N1Y9 231 aa7.24□□□□□ -1.25
VPS45-203ENST00000419023 NLGN1Q8N2Q7 840 aa7.24□□□□□ -1.25
VPS45-203ENST00000419023 SMC1BQ8NDV3 1235 aa7.24□□□□□ -1.25
VPS45-203ENST00000419023 PTPRN2Q92932 1015 aa7.24□□□□□ -1.25
VPS45-203ENST00000419023 KCNN1Q92952 543 aa7.24□□□□□ -1.25
VPS45-203ENST00000419023 SLC38A3Q99624 504 aa7.24□□□□□ -1.25
VPS45-203ENST00000419023 ZFYVE21Q9BQ24 234 aa7.24□□□□□ -1.25
VPS45-203ENST00000419023 SGPP1Q9BX95 441 aa7.24□□□□□ -1.25
VPS45-203ENST00000419023 SIRT5Q9NXA8 310 aa7.24□□□□□ -1.25
VPS45-203ENST00000419023 COA3Q9Y2R0 106 aaPredicted RBP7.24□□□□□ -1.25
VPS45-203ENST00000419023 X6R8D5 127 aa7.24□□□□□ -1.25
VPS45-203ENST00000419023 SMG6Q86US8 1419 aaKnown RBP7.24□□□□□ -1.25
VPS45-203ENST00000419023 PCDH11XQ9BZA7 1347 aa7.24□□□□□ -1.25
VPS45-203ENST00000419023 PCDH11YQ9BZA8 1340 aa7.24□□□□□ -1.25
VPS45-203ENST00000419023 COL24A1Q17RW2 1714 aa7.24□□□□□ -1.25
VPS45-203ENST00000419023 TEX51A0A1B0GUA7 166 aa7.23□□□□□ -1.25
VPS45-203ENST00000419023 MMP10P09238 476 aa7.23□□□□□ -1.25
VPS45-203ENST00000419023 GPR85P60893 370 aa7.23□□□□□ -1.25
VPS45-203ENST00000419023 GABREP78334 506 aa7.23□□□□□ -1.25
VPS45-203ENST00000419023 MAMDC2Q7Z304 686 aaPredicted RBP7.23□□□□□ -1.25
VPS45-203ENST00000419023 RNPC3Q96LT9 517 aaKnown RBP7.23□□□□□ -1.25
VPS45-203ENST00000419023 NDOR1Q9UHB4 597 aa7.23□□□□□ -1.25
VPS45-203ENST00000419023 NUDT5Q9UKK9 219 aa7.23□□□□□ -1.25
VPS45-203ENST00000419023 NSD2O96028 1365 aa7.22□□□□□ -1.25
VPS45-203ENST00000419023 EDC4Q6P2E9 1401 aaKnown RBP7.22□□□□□ -1.25
VPS45-203ENST00000419023 CCDC163A0A0D9SF12 145 aa7.22□□□□□ -1.25
VPS45-203ENST00000419023 A0A0G2JLW4 131 aa7.22□□□□□ -1.25
VPS45-203ENST00000419023 ETV2O00321 342 aaPredicted RBP7.22□□□□□ -1.25
VPS45-203ENST00000419023 HSPA1AP0DMV8 641 aaKnown RBP7.22□□□□□ -1.25
VPS45-203ENST00000419023 HSPA1BP0DMV9 641 aaKnown RBP7.22□□□□□ -1.25
VPS45-203ENST00000419023 HOXC9P31274 260 aa7.22□□□□□ -1.25
VPS45-203ENST00000419023 TMF1P82094 1093 aa7.22□□□□□ -1.25
VPS45-203ENST00000419023 HTRA3P83110 453 aa7.22□□□□□ -1.25
VPS45-203ENST00000419023 ZNF200P98182 395 aaPredicted RBP7.22□□□□□ -1.25
VPS45-203ENST00000419023 MROH9Q5TGP6 573 aa7.22□□□□□ -1.25
VPS45-203ENST00000419023 MTDHQ86UE4 582 aaKnown RBP7.22□□□□□ -1.25
VPS45-203ENST00000419023 RIOX2Q8IUF8 465 aa7.22□□□□□ -1.25
VPS45-203ENST00000419023 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.22□□□□□ -1.25
VPS45-203ENST00000419023 PEX11GQ96HA9 241 aa7.22□□□□□ -1.25
VPS45-203ENST00000419023 JAM3Q9BX67 310 aa7.22□□□□□ -1.25
VPS45-203ENST00000419023 SLC12A5Q9H2X9 1139 aa7.22□□□□□ -1.25
VPS45-203ENST00000419023 CDIP1Q9H305 208 aa7.22□□□□□ -1.25
VPS45-203ENST00000419023 BCAS3Q9H6U6 928 aa7.22□□□□□ -1.25
VPS45-203ENST00000419023 CNTD2Q9H8S5 307 aa7.22□□□□□ -1.25
VPS45-203ENST00000419023 RNF181Q9P0P0 153 aa7.22□□□□□ -1.25
VPS45-203ENST00000419023 MBD1Q9UIS9 605 aaPredicted RBP7.22□□□□□ -1.25
VPS45-203ENST00000419023 ESYT3A0FGR9 886 aa7.21□□□□□ -1.26
VPS45-203ENST00000419023 AQP7O14520 342 aa7.21□□□□□ -1.26
VPS45-203ENST00000419023 SEMA7AO75326 666 aa7.21□□□□□ -1.26
VPS45-203ENST00000419023 TMEM253P0C7T8 217 aa7.21□□□□□ -1.26
VPS45-203ENST00000419023 GRK2P25098 689 aa7.21□□□□□ -1.26
VPS45-203ENST00000419023 GRK3P35626 688 aa7.21□□□□□ -1.26
VPS45-203ENST00000419023 KIZQ2M2Z5 673 aa7.21□□□□□ -1.26
VPS45-203ENST00000419023 JAZF1Q86VZ6 243 aa7.21□□□□□ -1.26
VPS45-203ENST00000419023 DCP2Q8IU60 420 aaKnown RBP7.21□□□□□ -1.26
VPS45-203ENST00000419023 SLC52A2Q9HAB3 445 aa7.21□□□□□ -1.26
VPS45-203ENST00000419023 GCM1Q9NP62 436 aa7.21□□□□□ -1.26
VPS45-203ENST00000419023 TMOD3Q9NYL9 352 aa7.21□□□□□ -1.26
VPS45-203ENST00000419023 PLA2G2DQ9UNK4 145 aa7.21□□□□□ -1.26
VPS45-203ENST00000419023 MRPL42Q9Y6G3 142 aaKnown RBP7.21□□□□□ -1.26
VPS45-203ENST00000419023 MAP3K19Q56UN5 1328 aa7.21□□□□□ -1.26
VPS45-203ENST00000419023 SGSM2O43147 1006 aa7.2□□□□□ -1.26
VPS45-203ENST00000419023 SOD2P04179 222 aa7.2□□□□□ -1.26
VPS45-203ENST00000419023 RFC4P35249 363 aa7.2□□□□□ -1.26
VPS45-203ENST00000419023 CDR1P51861 262 aa7.2□□□□□ -1.26
VPS45-203ENST00000419023 EPHB3P54753 998 aa7.2□□□□□ -1.26
VPS45-203ENST00000419023 NCKAP1LP55160 1127 aa7.2□□□□□ -1.26
VPS45-203ENST00000419023 DLG4P78352 724 aa7.2□□□□□ -1.26
VPS45-203ENST00000419023 ZNF124Q15973 351 aa7.2□□□□□ -1.26
VPS45-203ENST00000419023 DALRD3Q5D0E6 543 aaKnown RBP7.2□□□□□ -1.26
VPS45-203ENST00000419023 NOP9Q86U38 636 aaKnown RBP7.2□□□□□ -1.26
VPS45-203ENST00000419023 LDHDQ86WU2 507 aa7.2□□□□□ -1.26
VPS45-203ENST00000419023 SLC7A14Q8TBB6 771 aa7.2□□□□□ -1.26
VPS45-203ENST00000419023 KCNJ15Q99712 375 aa7.2□□□□□ -1.26
VPS45-203ENST00000419023 ALG1Q9BT22 464 aa7.2□□□□□ -1.26
VPS45-203ENST00000419023 AP5M1Q9H0R1 490 aa7.2□□□□□ -1.26
VPS45-203ENST00000419023 EPB41L1Q9H4G0 881 aa7.2□□□□□ -1.26
VPS45-203ENST00000419023 NCOA5Q9HCD5 579 aaKnown RBP7.2□□□□□ -1.26
VPS45-203ENST00000419023 TMEM260Q9NX78 707 aa7.2□□□□□ -1.26
VPS45-203ENST00000419023 PCDHA9Q9Y5H5 950 aa7.2□□□□□ -1.26
VPS45-203ENST00000419023 PCDHA8Q9Y5H6 950 aa7.2□□□□□ -1.26
VPS45-203ENST00000419023 LY75O60449 1722 aa7.2□□□□□ -1.26
VPS45-203ENST00000419023 DOT1LQ8TEK3 1739 aa7.2□□□□□ -1.26
VPS45-203ENST00000419023 TUBGCP6Q96RT7 1819 aa7.2□□□□□ -1.26
VPS45-203ENST00000419023 SBNO2Q9Y2G9 1366 aa7.2□□□□□ -1.26
VPS45-203ENST00000419023 FAM208AQ9UK61 1670 aaKnown RBP7.19□□□□□ -1.26
VPS45-203ENST00000419023 LTN1O94822 1766 aa7.19□□□□□ -1.26
VPS45-203ENST00000419023 NFIBO00712 420 aa7.19□□□□□ -1.26
VPS45-203ENST00000419023 DGKIO75912 1065 aa7.19□□□□□ -1.26
VPS45-203ENST00000419023 KRT1P04264 644 aa7.19□□□□□ -1.26
VPS45-203ENST00000419023 C1QTNF9P0C862 333 aa7.19□□□□□ -1.26
VPS45-203ENST00000419023 VEGFAP15692 232 aaPredicted RBP7.19□□□□□ -1.26
VPS45-203ENST00000419023 DPEP1P16444 411 aa7.19□□□□□ -1.26
VPS45-203ENST00000419023 GUCY1A3Q02108 690 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms