RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 BTBD2Q9BX70 525 aa6.44□□□□□ -1.38
HMGB1P49-201ENST00000418882 OR10A5Q9H207 317 aa6.44□□□□□ -1.38
HMGB1P49-201ENST00000418882 SEMA4AQ9H3S1 761 aa6.44□□□□□ -1.38
HMGB1P49-201ENST00000418882 ACSS2Q9NR19 701 aa6.44□□□□□ -1.38
HMGB1P49-201ENST00000418882 MAPRE3Q9UPY8 281 aa6.44□□□□□ -1.38
HMGB1P49-201ENST00000418882 ZKSCAN5Q9Y2L8 839 aa6.44□□□□□ -1.38
HMGB1P49-201ENST00000418882 BTBD11A6QL63 1104 aa6.43□□□□□ -1.38
HMGB1P49-201ENST00000418882 GAS7O60861 476 aa6.43□□□□□ -1.38
HMGB1P49-201ENST00000418882 CNR2P34972 360 aa6.43□□□□□ -1.38
HMGB1P49-201ENST00000418882 SMAD3P84022 425 aaKnown RBP6.43□□□□□ -1.38
HMGB1P49-201ENST00000418882 TOP3AQ13472 1001 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P49-201ENST00000418882 ZNF174Q15697 407 aa6.43□□□□□ -1.38
HMGB1P49-201ENST00000418882 BCL6BQ8N143 479 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P49-201ENST00000418882 AHI1Q8N157 1196 aa6.43□□□□□ -1.38
HMGB1P49-201ENST00000418882 RTF1Q92541 710 aaKnown RBP6.43□□□□□ -1.38
HMGB1P49-201ENST00000418882 FOXB1Q99853 325 aa6.43□□□□□ -1.38
HMGB1P49-201ENST00000418882 KATNBL1Q9H079 304 aa6.43□□□□□ -1.38
HMGB1P49-201ENST00000418882 TOMM22Q9NS69 142 aa6.43□□□□□ -1.38
HMGB1P49-201ENST00000418882 USP40Q9NVE5 1235 aa6.43□□□□□ -1.38
HMGB1P49-201ENST00000418882 RTEL1Q9NZ71 1219 aa6.43□□□□□ -1.38
HMGB1P49-201ENST00000418882 ADAM29Q9UKF5 820 aa6.43□□□□□ -1.38
HMGB1P49-201ENST00000418882 CADPSQ9ULU8 1353 aa6.43□□□□□ -1.38
HMGB1P49-201ENST00000418882 BPIP17213 487 aa6.42□□□□□ -1.38
HMGB1P49-201ENST00000418882 POU3F3P20264 500 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P49-201ENST00000418882 SLC6A3Q01959 620 aa6.42□□□□□ -1.38
HMGB1P49-201ENST00000418882 MYBPC3Q14896 1274 aa6.42□□□□□ -1.38
HMGB1P49-201ENST00000418882 WDR72Q3MJ13 1102 aa6.42□□□□□ -1.38
HMGB1P49-201ENST00000418882 ZNF662Q6ZS27 426 aa6.42□□□□□ -1.38
HMGB1P49-201ENST00000418882 LARP4Q71RC2 724 aaKnown RBP eCLIP6.42□□□□□ -1.38
HMGB1P49-201ENST00000418882 KLHL36Q8N4N3 616 aa6.42□□□□□ -1.38
HMGB1P49-201ENST00000418882 EFHBQ8N7U6 833 aa6.42□□□□□ -1.38
HMGB1P49-201ENST00000418882 AJUBAQ96IF1 538 aa6.42□□□□□ -1.38
HMGB1P49-201ENST00000418882 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.42□□□□□ -1.38
HMGB1P49-201ENST00000418882 IFT57Q9NWB7 429 aa6.42□□□□□ -1.38
HMGB1P49-201ENST00000418882 CDC42EP3Q9UKI2 254 aa6.42□□□□□ -1.38
HMGB1P49-201ENST00000418882 INVSQ9Y283 1065 aa6.42□□□□□ -1.38
HMGB1P49-201ENST00000418882 FKBP9O95302 570 aa6.41□□□□□ -1.38
HMGB1P49-201ENST00000418882 CYP17A1P05093 508 aa6.41□□□□□ -1.38
HMGB1P49-201ENST00000418882 POLD1P28340 1107 aa6.41□□□□□ -1.38
HMGB1P49-201ENST00000418882 SCNN1BP51168 640 aa6.41□□□□□ -1.38
HMGB1P49-201ENST00000418882 MOGSQ13724 837 aa6.41□□□□□ -1.38
HMGB1P49-201ENST00000418882 EPHA7Q15375 998 aa6.41□□□□□ -1.38
HMGB1P49-201ENST00000418882 FKBP9P1Q75LS8 142 aa6.41□□□□□ -1.38
HMGB1P49-201ENST00000418882 KBTBD2Q8IY47 623 aa6.41□□□□□ -1.38
HMGB1P49-201ENST00000418882 OR2W6PQ8NHA6 318 aa6.41□□□□□ -1.38
HMGB1P49-201ENST00000418882 ZDHHC5Q9C0B5 715 aa6.41□□□□□ -1.38
HMGB1P49-201ENST00000418882 SLKQ9H2G2 1235 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P49-201ENST00000418882 EMC7Q9NPA0 242 aa6.41□□□□□ -1.38
HMGB1P49-201ENST00000418882 MAGEL2Q9UJ55 1249 aa6.41□□□□□ -1.38
HMGB1P49-201ENST00000418882 ZDHHC9Q9Y397 364 aa6.41□□□□□ -1.38
HMGB1P49-201ENST00000418882 KRTAP4-8A0A0G2JLE6 195 aa6.4□□□□□ -1.38
HMGB1P49-201ENST00000418882 UBA6A0AVT1 1052 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P49-201ENST00000418882 NEMP1O14524 444 aa6.4□□□□□ -1.38
HMGB1P49-201ENST00000418882 VIL1P09327 827 aaKnown RBP6.4□□□□□ -1.38
HMGB1P49-201ENST00000418882 LSSP48449 732 aa6.4□□□□□ -1.38
HMGB1P49-201ENST00000418882 KCNQ1P51787 676 aa6.4□□□□□ -1.38
HMGB1P49-201ENST00000418882 KPNA1P52294 538 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P49-201ENST00000418882 IL2P60568 153 aa6.4□□□□□ -1.38
HMGB1P49-201ENST00000418882 TMEM200BQ69YZ2 307 aa6.4□□□□□ -1.38
HMGB1P49-201ENST00000418882 UNQ6494/PRO21346Q6UXR6 183 aa6.4□□□□□ -1.38
HMGB1P49-201ENST00000418882 DPP8Q6V1X1 898 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P49-201ENST00000418882 LHFPL2Q6ZUX7 228 aa6.4□□□□□ -1.38
HMGB1P49-201ENST00000418882 AFAP1L2Q8N4X5 818 aa6.4□□□□□ -1.38
HMGB1P49-201ENST00000418882 MAML3Q96JK9 1138 aa6.4□□□□□ -1.38
HMGB1P49-201ENST00000418882 TEPSINQ96N21 525 aa6.4□□□□□ -1.38
HMGB1P49-201ENST00000418882 PTPN18Q99952 460 aa6.4□□□□□ -1.38
HMGB1P49-201ENST00000418882 KIAA1683Q9H0B3 1180 aa6.4□□□□□ -1.38
HMGB1P49-201ENST00000418882 RAPGEFL1Q9UHV5 662 aa6.4□□□□□ -1.38
HMGB1P49-201ENST00000418882 ELL2O00472 640 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P49-201ENST00000418882 ETV4P43268 484 aa6.39□□□□□ -1.39
HMGB1P49-201ENST00000418882 RRADP55042 308 aa6.39□□□□□ -1.39
HMGB1P49-201ENST00000418882 CTSWP56202 376 aa6.39□□□□□ -1.39
HMGB1P49-201ENST00000418882 ANTXR2P58335 489 aa6.39□□□□□ -1.39
HMGB1P49-201ENST00000418882 STRN3Q13033 797 aa6.39□□□□□ -1.39
HMGB1P49-201ENST00000418882 NOLC1Q14978 699 aaKnown RBP eCLIP6.39□□□□□ -1.39
HMGB1P49-201ENST00000418882 EIF4HQ15056 248 aaKnown RBP6.39□□□□□ -1.39
HMGB1P49-201ENST00000418882 DHCR24Q15392 516 aa6.39□□□□□ -1.39
HMGB1P49-201ENST00000418882 TBR1Q16650 682 aa6.39□□□□□ -1.39
HMGB1P49-201ENST00000418882 ZFYVE27Q5T4F4 411 aa6.39□□□□□ -1.39
HMGB1P49-201ENST00000418882 SLFN12LQ6IEE8 588 aa6.39□□□□□ -1.39
HMGB1P49-201ENST00000418882 CXXC5Q7LFL8 322 aaKnown RBP6.39□□□□□ -1.39
HMGB1P49-201ENST00000418882 ZNF496Q96IT1 587 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P49-201ENST00000418882 MYL10Q9BUA6 226 aa6.39□□□□□ -1.39
HMGB1P49-201ENST00000418882 POFUT1Q9H488 388 aa6.39□□□□□ -1.39
HMGB1P49-201ENST00000418882 CAAP1Q9H8G2 361 aa6.39□□□□□ -1.39
HMGB1P49-201ENST00000418882 BARX1Q9HBU1 254 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P49-201ENST00000418882 SBNO2Q9Y2G9 1366 aa6.39□□□□□ -1.39
HMGB1P49-201ENST00000418882 CNOT4O95628 575 aaKnown RBP6.38□□□□□ -1.39
HMGB1P49-201ENST00000418882 APEX1P27695 318 aaKnown RBP6.38□□□□□ -1.39
HMGB1P49-201ENST00000418882 STAT5BP51692 787 aa6.38□□□□□ -1.39
HMGB1P49-201ENST00000418882 KIAA2012Q0VF49 1180 aa6.38□□□□□ -1.39
HMGB1P49-201ENST00000418882 NFIXQ14938 502 aa6.38□□□□□ -1.39
HMGB1P49-201ENST00000418882 TERF2Q15554 542 aa6.38□□□□□ -1.39
HMGB1P49-201ENST00000418882 TBC1D10BQ4KMP7 808 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P49-201ENST00000418882 TTC38Q5R3I4 469 aa6.38□□□□□ -1.39
HMGB1P49-201ENST00000418882 PRAMEF9Q5VWM5 478 aa6.38□□□□□ -1.39
HMGB1P49-201ENST00000418882 REXO1L1PQ8IX06 675 aa6.38□□□□□ -1.39
HMGB1P49-201ENST00000418882 LGI4Q8N135 537 aa6.38□□□□□ -1.39
HMGB1P49-201ENST00000418882 CALML6Q8TD86 181 aa6.38□□□□□ -1.39
HMGB1P49-201ENST00000418882 CHAC2Q8WUX2 184 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms