RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 ZFATQ9P243 1243 aa12.67□□□□□ -0.38
DDR1-232ENST00000418800 ASIC3Q9UHC3 531 aa12.67□□□□□ -0.38
DDR1-232ENST00000418800 LAMA4Q16363 1823 aa12.67□□□□□ -0.38
DDR1-232ENST00000418800 CCDC160A6NGH7 325 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 CCDC169A6NNP5 214 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 LDHBP07195 334 aaKnown RBP12.66□□□□□ -0.38
DDR1-232ENST00000418800 PLCG2P16885 1265 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 DRD4P21917 467 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 PAPOLAP51003 745 aaKnown RBP12.66□□□□□ -0.38
DDR1-232ENST00000418800 CYP2J2P51589 502 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 XRCC4Q13426 336 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 SLC29A2Q14542 456 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 SETDB1Q15047 1291 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 NAB2Q15742 525 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 TSNAXIP1Q2TAA8 658 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 UNC13DQ70J99 1090 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 KCNK18Q7Z418 384 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 ARHGEF10LQ9HCE6 1279 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 OSGEPQ9NPF4 335 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 PLCB1Q9NQ66 1216 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 MTRF1LQ9UGC7 380 aaKnown RBP12.66□□□□□ -0.38
DDR1-232ENST00000418800 MST1RQ04912 1400 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 SPOPO43791 374 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 ORC4O43929 436 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 LUC7L3O95232 432 aaKnown RBP12.66□□□□□ -0.38
DDR1-232ENST00000418800 KRT16P08779 473 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 ADCY2Q08462 1091 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 CUL1Q13616 776 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 LAMB3Q13751 1172 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 AADACL2Q6P093 401 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 EPS8L3Q8TE67 593 aaKnown RBP12.66□□□□□ -0.38
DDR1-232ENST00000418800 ZNF570Q96NI8 536 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 ISCUQ9H1K1 167 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 HDAC9Q9UKV0 1011 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 AGAP1Q9UPQ3 857 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 POTEB3A0JP26 581 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 POTECB2RU33 542 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 FECHP22830 423 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 COASYQ13057 564 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 TNIP1Q15025 636 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 UAP1Q16222 522 aaPredicted RBP12.66□□□□□ -0.38
DDR1-232ENST00000418800 DDB1Q16531 1140 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 POTEBQ6S5H4 581 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 C6orf89Q6UWU4 347 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 ZC3H18Q86VM9 953 aaKnown RBP12.66□□□□□ -0.38
DDR1-232ENST00000418800 SYCP3Q8IZU3 236 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 DTX3LQ8TDB6 740 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 NAF1Q96HR8 494 aaKnown RBP12.66□□□□□ -0.38
DDR1-232ENST00000418800 NUDCD1Q96RS6 583 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 CEP72Q9P209 647 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 RNF14Q9UBS8 474 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 SIK3Q9Y2K2 1263 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 PNPLA7Q6ZV29 1317 aa12.66□□□□□ -0.38
DDR1-232ENST00000418800 PYGLP06737 847 aa12.65□□□□□ -0.38
DDR1-232ENST00000418800 SNAP25P60880 206 aa12.65□□□□□ -0.38
DDR1-232ENST00000418800 CALCOCO2Q13137 446 aa12.65□□□□□ -0.38
DDR1-232ENST00000418800 TRIM28Q13263 835 aaKnown RBP12.65□□□□□ -0.38
DDR1-232ENST00000418800 SEPT7Q16181 437 aaKnown RBP12.65□□□□□ -0.38
DDR1-232ENST00000418800 CELF1Q92879 486 aaKnown RBP12.65□□□□□ -0.38
DDR1-232ENST00000418800 TTYH3Q9C0H2 523 aa12.65□□□□□ -0.38
DDR1-232ENST00000418800 LRRC4CQ9HCJ2 640 aa12.65□□□□□ -0.38
DDR1-232ENST00000418800 METTL5Q9NRN9 209 aaKnown RBP12.65□□□□□ -0.38
DDR1-232ENST00000418800 PKD2L1Q9P0L9 805 aa12.65□□□□□ -0.38
DDR1-232ENST00000418800 G3V3G9 751 aa12.65□□□□□ -0.38
DDR1-232ENST00000418800 RASGRF2O14827 1237 aa12.65□□□□□ -0.38
DDR1-232ENST00000418800 TBCAO75347 108 aaKnown RBP12.65□□□□□ -0.38
DDR1-232ENST00000418800 HSPA9P38646 679 aaKnown RBP12.65□□□□□ -0.38
DDR1-232ENST00000418800 STAT1P42224 750 aa12.65□□□□□ -0.38
DDR1-232ENST00000418800 LONRF1Q17RB8 773 aa12.65□□□□□ -0.38
DDR1-232ENST00000418800 LRRC23Q53EV4 343 aaPredicted RBP12.65□□□□□ -0.38
DDR1-232ENST00000418800 DCAF8Q5TAQ9 597 aa12.65□□□□□ -0.38
DDR1-232ENST00000418800 SEPT14Q6ZU15 432 aa12.65□□□□□ -0.38
DDR1-232ENST00000418800 TNFRSF25Q93038 417 aa12.65□□□□□ -0.38
DDR1-232ENST00000418800 TMEM237Q96Q45 408 aa12.65□□□□□ -0.38
DDR1-232ENST00000418800 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.65□□□□□ -0.383e-6■■■□□ 17.9
DDR1-232ENST00000418800 CNOT10Q9H9A5 744 aaKnown RBP12.65□□□□□ -0.38
DDR1-232ENST00000418800 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.65□□□□□ -0.389e-7■■■■□ 21.1
DDR1-232ENST00000418800 SLC37A4O43826 429 aa12.65□□□□□ -0.38
DDR1-232ENST00000418800 MGRN1O60291 552 aa12.65□□□□□ -0.38
DDR1-232ENST00000418800 TLR2O60603 784 aa12.65□□□□□ -0.38
DDR1-232ENST00000418800 PDE6CP51160 858 aa12.65□□□□□ -0.38
DDR1-232ENST00000418800 ADCY7P51828 1080 aa12.65□□□□□ -0.38
DDR1-232ENST00000418800 KCNMA1Q12791 1236 aa12.65□□□□□ -0.38
DDR1-232ENST00000418800 ZSCAN29Q8IWY8 852 aaPredicted RBP12.65□□□□□ -0.38
DDR1-232ENST00000418800 CCHCR1Q8TD31 782 aa12.65□□□□□ -0.38
DDR1-232ENST00000418800 SH3RF3Q8TEJ3 882 aaPredicted RBP12.65□□□□□ -0.38
DDR1-232ENST00000418800 RIOK1Q9BRS2 568 aaKnown RBP12.65□□□□□ -0.38
DDR1-232ENST00000418800 MTFR1LQ9H019 292 aa12.65□□□□□ -0.38
DDR1-232ENST00000418800 KDM4CQ9H3R0 1056 aa12.65□□□□□ -0.38
DDR1-232ENST00000418800 RASAL2Q9UJF2 1139 aa12.65□□□□□ -0.38
DDR1-232ENST00000418800 USP17L5A8MUK1 530 aa12.64□□□□□ -0.39
DDR1-232ENST00000418800 CYTH3O43739 400 aa12.64□□□□□ -0.39
DDR1-232ENST00000418800 BAG3O95817 575 aa12.64□□□□□ -0.39
DDR1-232ENST00000418800 ERFEQ4G0M1 354 aa12.64□□□□□ -0.39
DDR1-232ENST00000418800 SLC30A10Q6XR72 485 aa12.64□□□□□ -0.39
DDR1-232ENST00000418800 SPIRE2Q8WWL2 714 aa12.64□□□□□ -0.39
DDR1-232ENST00000418800 GBP5Q96PP8 586 aa12.64□□□□□ -0.39
DDR1-232ENST00000418800 FGFBP2Q9BYJ0 223 aa12.64□□□□□ -0.39
DDR1-232ENST00000418800 RAB17Q9H0T7 212 aa12.64□□□□□ -0.39
DDR1-232ENST00000418800 TAOK3Q9H2K8 898 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms