RNA–Protein interactions for RNA: ENST00000417633.1

SYNC-203, Transcript of syncoilin, intermediate filament protein, humanhuman

TSL 4

Gene SYNC, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-203ENST00000417633 CKAP2LQ8IYA6 745 aa12.9□□□□□ -0.34
SYNC-203ENST00000417633 CEP57L1Q8IYX8 460 aa12.9□□□□□ -0.34
SYNC-203ENST00000417633 CEP89Q96ST8 783 aa12.9□□□□□ -0.34
SYNC-203ENST00000417633 BHMT2Q9H2M3 363 aa12.9□□□□□ -0.34
SYNC-203ENST00000417633 TNMDQ9H2S6 317 aa12.9□□□□□ -0.34
SYNC-203ENST00000417633 CYP26B1Q9NR63 512 aa12.9□□□□□ -0.34
SYNC-203ENST00000417633 KBTBD4Q9NVX7 518 aa12.9□□□□□ -0.34
SYNC-203ENST00000417633 PHF24Q9UPV7 400 aa12.9□□□□□ -0.34
SYNC-203ENST00000417633 ZBTB42B2RXF5 422 aa12.89□□□□□ -0.35
SYNC-203ENST00000417633 KBTBD13C9JR72 458 aa12.89□□□□□ -0.35
SYNC-203ENST00000417633 KINO60870 393 aaKnown RBP12.89□□□□□ -0.35
SYNC-203ENST00000417633 MARK3P27448 753 aa12.89□□□□□ -0.35
SYNC-203ENST00000417633 ACLYP53396 1101 aa12.89□□□□□ -0.35
SYNC-203ENST00000417633 MDM2Q00987 491 aaPredicted RBP12.89□□□□□ -0.35
SYNC-203ENST00000417633 AMPD3Q01432 767 aa12.89□□□□□ -0.35
SYNC-203ENST00000417633 MCM6Q14566 821 aa12.89□□□□□ -0.35
SYNC-203ENST00000417633 XKR9Q5GH70 373 aa12.89□□□□□ -0.35
SYNC-203ENST00000417633 CNNM4Q6P4Q7 775 aa12.89□□□□□ -0.35
SYNC-203ENST00000417633 C1orf186Q6ZWK4 172 aa12.89□□□□□ -0.35
SYNC-203ENST00000417633 ANKLE1Q8NAG6 615 aa12.89□□□□□ -0.35
SYNC-203ENST00000417633 CNNM3Q8NE01 707 aa12.89□□□□□ -0.35
SYNC-203ENST00000417633 CCDC34Q96HJ3 373 aa12.89□□□□□ -0.35
SYNC-203ENST00000417633 CEP170P1Q96L14 293 aa12.89□□□□□ -0.35
SYNC-203ENST00000417633 MTRQ99707 1265 aa12.89□□□□□ -0.35
SYNC-203ENST00000417633 TMEM106CQ9BVX2 250 aa12.89□□□□□ -0.35
SYNC-203ENST00000417633 LRRC27Q9C0I9 530 aa12.89□□□□□ -0.35
SYNC-203ENST00000417633 PDLIM7Q9NR12 457 aa12.89□□□□□ -0.35
SYNC-203ENST00000417633 KCND2Q9NZV8 630 aa12.89□□□□□ -0.35
SYNC-203ENST00000417633 SEPT9Q9UHD8 586 aaPredicted RBP12.89□□□□□ -0.35
SYNC-203ENST00000417633 COL1A2P08123 1366 aa12.89□□□□□ -0.35
SYNC-203ENST00000417633 CENPFP49454 3210 aa12.89□□□□□ -0.35
SYNC-203ENST00000417633 ARHGEF35A5YM69 484 aa12.88□□□□□ -0.35
SYNC-203ENST00000417633 TMEM150BA6NC51 233 aa12.88□□□□□ -0.35
SYNC-203ENST00000417633 RRN3P2A6NIE6 340 aa12.88□□□□□ -0.35
SYNC-203ENST00000417633 TFRCP02786 760 aaKnown RBP12.88□□□□□ -0.35
SYNC-203ENST00000417633 MYL1P05976 194 aa12.88□□□□□ -0.35
SYNC-203ENST00000417633 INSRRP14616 1297 aa12.88□□□□□ -0.35
SYNC-203ENST00000417633 HOXC8P31273 242 aa12.88□□□□□ -0.35
SYNC-203ENST00000417633 MNX1P50219 401 aaPredicted RBP12.88□□□□□ -0.35
SYNC-203ENST00000417633 NPEPPSP55786 919 aa12.88□□□□□ -0.35
SYNC-203ENST00000417633 KLHL40Q2TBA0 621 aa12.88□□□□□ -0.35
SYNC-203ENST00000417633 NBPF20Q3BBV1 942 aa12.88□□□□□ -0.35
SYNC-203ENST00000417633 PLA2G4FQ68DD2 849 aa12.88□□□□□ -0.35
SYNC-203ENST00000417633 RINT1Q6NUQ1 792 aa12.88□□□□□ -0.35
SYNC-203ENST00000417633 NFRKBQ6P4R8 1299 aa12.88□□□□□ -0.35
SYNC-203ENST00000417633 TRMT1LQ7Z2T5 733 aaKnown RBP12.88□□□□□ -0.35
SYNC-203ENST00000417633 SESTD1Q86VW0 696 aa12.88□□□□□ -0.35
SYNC-203ENST00000417633 EXOC8Q8IYI6 725 aa12.88□□□□□ -0.35
SYNC-203ENST00000417633 SLC43A3Q8NBI5 491 aa12.88□□□□□ -0.35
SYNC-203ENST00000417633 PAGE5Q96GU1 130 aa12.88□□□□□ -0.35
SYNC-203ENST00000417633 GLT1D1Q96MS3 346 aa12.88□□□□□ -0.35
SYNC-203ENST00000417633 C7orf25Q9BPX7 421 aa12.88□□□□□ -0.35
SYNC-203ENST00000417633 SEZ6LQ9BYH1 1024 aa12.88□□□□□ -0.35
SYNC-203ENST00000417633 DHX33Q9H6R0 707 aaKnown RBP12.88□□□□□ -0.35
SYNC-203ENST00000417633 TRPC6Q9Y210 931 aa12.88□□□□□ -0.35
SYNC-203ENST00000417633 NRCAMQ92823 1304 aa12.88□□□□□ -0.35
SYNC-203ENST00000417633 IGKV6-21A0A0C4DH24 114 aa12.87□□□□□ -0.35
SYNC-203ENST00000417633 A0A1W2PQ45 241 aaPredicted RBP12.87□□□□□ -0.35
SYNC-203ENST00000417633 A0A1W2PQY0 241 aa12.87□□□□□ -0.35
SYNC-203ENST00000417633 MYMKA6NI61 221 aa12.87□□□□□ -0.35
SYNC-203ENST00000417633 MAFO75444 373 aaPredicted RBP12.87□□□□□ -0.35
SYNC-203ENST00000417633 DGAT1O75907 488 aa12.87□□□□□ -0.35
SYNC-203ENST00000417633 MYCNP04198 464 aaPredicted RBP12.87□□□□□ -0.35
SYNC-203ENST00000417633 SMIM10L2AP0DMW4 78 aa12.87□□□□□ -0.35
SYNC-203ENST00000417633 SMIM10L2BP0DMW5 78 aa12.87□□□□□ -0.35
SYNC-203ENST00000417633 CYP11B2P19099 503 aa12.87□□□□□ -0.35
SYNC-203ENST00000417633 RFC5P40937 340 aa12.87□□□□□ -0.35
SYNC-203ENST00000417633 ADAM17P78536 824 aa12.87□□□□□ -0.35
SYNC-203ENST00000417633 PTPN11Q06124 597 aaPredicted RBP12.87□□□□□ -0.35
SYNC-203ENST00000417633 PPFIA1Q13136 1202 aa12.87□□□□□ -0.35
SYNC-203ENST00000417633 MTERF2Q49AM1 385 aa12.87□□□□□ -0.35
SYNC-203ENST00000417633 ARSHQ5FYA8 562 aa12.87□□□□□ -0.35
SYNC-203ENST00000417633 PADI6Q6TGC4 694 aa12.87□□□□□ -0.35
SYNC-203ENST00000417633 GPBP1Q86WP2 473 aa12.87□□□□□ -0.35
SYNC-203ENST00000417633 TIPINQ9BVW5 301 aa12.87□□□□□ -0.35
SYNC-203ENST00000417633 CLSTN2Q9H4D0 955 aa12.87□□□□□ -0.35
SYNC-203ENST00000417633 GRIN2DO15399 1336 aa12.87□□□□□ -0.35
SYNC-203ENST00000417633 ARID2Q68CP9 1835 aa12.86□□□□□ -0.35
SYNC-203ENST00000417633 MBLAC1A4D2B0 266 aaPredicted RBP12.86□□□□□ -0.35
SYNC-203ENST00000417633 MAGEB2O15479 319 aa12.86□□□□□ -0.35
SYNC-203ENST00000417633 GTPBP6O43824 516 aaPredicted RBP12.86□□□□□ -0.35
SYNC-203ENST00000417633 TRAK2O60296 914 aa12.86□□□□□ -0.35
SYNC-203ENST00000417633 SSBP05455 408 aaKnown RBP eCLIP12.86□□□□□ -0.35
SYNC-203ENST00000417633 GNAT1P11488 350 aa12.86□□□□□ -0.35
SYNC-203ENST00000417633 GUCY2CP25092 1073 aa12.86□□□□□ -0.35
SYNC-203ENST00000417633 AFMP43652 599 aa12.86□□□□□ -0.35
SYNC-203ENST00000417633 ITGA7Q13683 1181 aa12.86□□□□□ -0.35
SYNC-203ENST00000417633 DHX8Q14562 1220 aaKnown RBP12.86□□□□□ -0.35
SYNC-203ENST00000417633 GRIK4Q16099 956 aa12.86□□□□□ -0.35
SYNC-203ENST00000417633 MARCH8Q5T0T0 291 aa12.86□□□□□ -0.35
SYNC-203ENST00000417633 C7orf31Q8N865 590 aa12.86□□□□□ -0.35
SYNC-203ENST00000417633 DDX12PQ92771 950 aa12.86□□□□□ -0.35
SYNC-203ENST00000417633 CCDC43Q96MW1 224 aaKnown RBP12.86□□□□□ -0.35
SYNC-203ENST00000417633 JPH2Q9BR39 696 aaPredicted RBP12.86□□□□□ -0.35
SYNC-203ENST00000417633 SH2D3AQ9BRG2 576 aa12.86□□□□□ -0.35
SYNC-203ENST00000417633 RUSC1Q9BVN2 902 aa12.86□□□□□ -0.35
SYNC-203ENST00000417633 TRIM9Q9C026 710 aa12.86□□□□□ -0.35
SYNC-203ENST00000417633 BMP2KQ9NSY1 1161 aaPredicted RBP12.86□□□□□ -0.35
SYNC-203ENST00000417633 SETD4Q9NVD3 440 aa12.86□□□□□ -0.35
SYNC-203ENST00000417633 HDAC6Q9UBN7 1215 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms