RNA–Protein interactions for RNA: ENST00000416742.5

LINC00494-201, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best) BASIC

Gene LINC00494, Length 3,544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-201ENST00000416742 WDR11Q9BZH6 1224 aa10.92□□□□□ -0.66
LINC00494-201ENST00000416742 METTL14Q9HCE5 456 aaKnown RBP10.92□□□□□ -0.66
LINC00494-201ENST00000416742 RAVER2Q9HCJ3 691 aaKnown RBP10.92□□□□□ -0.66
LINC00494-201ENST00000416742 HYOU1Q9Y4L1 999 aa10.92□□□□□ -0.66
LINC00494-201ENST00000416742 FAM170AA1A519 330 aa10.91□□□□□ -0.66
LINC00494-201ENST00000416742 TGFB1I1O43294 461 aa10.91□□□□□ -0.66
LINC00494-201ENST00000416742 UCHL3P15374 230 aa10.91□□□□□ -0.66
LINC00494-201ENST00000416742 KLRC1P26715 233 aa10.91□□□□□ -0.66
LINC00494-201ENST00000416742 PON1P27169 355 aa10.91□□□□□ -0.66
LINC00494-201ENST00000416742 PPP2R5CQ13362 524 aa10.91□□□□□ -0.66
LINC00494-201ENST00000416742 SF3B2Q13435 895 aaKnown RBP10.91□□□□□ -0.66
LINC00494-201ENST00000416742 CASP8Q14790 479 aa10.91□□□□□ -0.66
LINC00494-201ENST00000416742 EPHA7Q15375 998 aa10.91□□□□□ -0.66
LINC00494-201ENST00000416742 MIER3Q7Z3K6 550 aa10.91□□□□□ -0.66
LINC00494-201ENST00000416742 FAM83AQ86UY5 434 aa10.91□□□□□ -0.66
LINC00494-201ENST00000416742 ZC3H3Q8IXZ2 948 aaKnown RBP10.91□□□□□ -0.66
LINC00494-201ENST00000416742 SYCP3Q8IZU3 236 aa10.91□□□□□ -0.66
LINC00494-201ENST00000416742 AGBL3Q8NEM8 1001 aa10.91□□□□□ -0.66
LINC00494-201ENST00000416742 SYN2Q92777 582 aaPredicted RBP10.91□□□□□ -0.66
LINC00494-201ENST00000416742 RPGRIP1Q96KN7 1286 aa10.91□□□□□ -0.66
LINC00494-201ENST00000416742 SH2D3AQ9BRG2 576 aa10.91□□□□□ -0.66
LINC00494-201ENST00000416742 LXNQ9BS40 222 aa10.91□□□□□ -0.66
LINC00494-201ENST00000416742 PRDM4Q9UKN5 801 aa10.91□□□□□ -0.66
LINC00494-201ENST00000416742 MAP2K7O14733 419 aa10.91□□□□□ -0.66
LINC00494-201ENST00000416742 PJA2O43164 708 aa10.91□□□□□ -0.66
LINC00494-201ENST00000416742 TBC1D12O60347 775 aa10.91□□□□□ -0.66
LINC00494-201ENST00000416742 FTCDO95954 541 aa10.91□□□□□ -0.66
LINC00494-201ENST00000416742 TUBBP07437 444 aa10.91□□□□□ -0.66
LINC00494-201ENST00000416742 PAFAH1B1P43034 410 aa10.91□□□□□ -0.66
LINC00494-201ENST00000416742 KLHDC7AQ5VTJ3 777 aa10.91□□□□□ -0.66
LINC00494-201ENST00000416742 IQCEQ6IPM2 695 aa10.91□□□□□ -0.66
LINC00494-201ENST00000416742 CCDC70Q6NSX1 233 aa10.91□□□□□ -0.66
LINC00494-201ENST00000416742 CREG2Q8IUH2 290 aa10.91□□□□□ -0.66
LINC00494-201ENST00000416742 GSPT2Q8IYD1 628 aaKnown RBP10.91□□□□□ -0.66
LINC00494-201ENST00000416742 FAM186BQ8IYM0 893 aa10.91□□□□□ -0.66
LINC00494-201ENST00000416742 MXRA8Q9BRK3 442 aa10.91□□□□□ -0.66
LINC00494-201ENST00000416742 MYOZ2Q9NPC6 264 aa10.91□□□□□ -0.66
LINC00494-201ENST00000416742 COL2A1P02458 1487 aaPredicted RBP10.91□□□□□ -0.66
LINC00494-201ENST00000416742 H3BQF6 201 aa10.91□□□□□ -0.66
LINC00494-201ENST00000416742 PHACTR2O75167 634 aa10.91□□□□□ -0.66
LINC00494-201ENST00000416742 PALMO75781 387 aa10.91□□□□□ -0.66
LINC00494-201ENST00000416742 RNASE9P60153 205 aaKnown RBP10.91□□□□□ -0.66
LINC00494-201ENST00000416742 SLC18A3Q16572 532 aa10.91□□□□□ -0.66
LINC00494-201ENST00000416742 HS2ST1Q7LGA3 356 aa10.91□□□□□ -0.66
LINC00494-201ENST00000416742 OLFML3Q9NRN5 406 aa10.91□□□□□ -0.66
LINC00494-201ENST00000416742 GCNT4Q9P109 453 aa10.91□□□□□ -0.66
LINC00494-201ENST00000416742 COL20A1Q9P218 1284 aa10.91□□□□□ -0.66
LINC00494-201ENST00000416742 A0A0U1RQG5 324 aaPredicted RBP10.9□□□□□ -0.66
LINC00494-201ENST00000416742 PPP1R12BO60237 982 aaPredicted RBP10.9□□□□□ -0.66
LINC00494-201ENST00000416742 EIF3JO75822 258 aaKnown RBP10.9□□□□□ -0.66
LINC00494-201ENST00000416742 MYCLP12524 364 aaPredicted RBP10.9□□□□□ -0.66
LINC00494-201ENST00000416742 TCP1P17987 556 aaKnown RBP10.9□□□□□ -0.66
LINC00494-201ENST00000416742 NOP2P46087 812 aaKnown RBP10.9□□□□□ -0.66
LINC00494-201ENST00000416742 PTK2Q05397 1052 aa10.9□□□□□ -0.66
LINC00494-201ENST00000416742 PTPROQ16827 1216 aa10.9□□□□□ -0.66
LINC00494-201ENST00000416742 FKBP1CQ5VVH2 108 aa10.9□□□□□ -0.66
LINC00494-201ENST00000416742 PRPF38AQ8NAV1 312 aaKnown RBP10.9□□□□□ -0.66
LINC00494-201ENST00000416742 IL31RAQ8NI17 732 aa10.9□□□□□ -0.66
LINC00494-201ENST00000416742 MS4A14Q96JA4 679 aa10.9□□□□□ -0.66
LINC00494-201ENST00000416742 AIPL1Q9NZN9 384 aa10.9□□□□□ -0.66
LINC00494-201ENST00000416742 N4BP1O75113 896 aaKnown RBP10.9□□□□□ -0.66
LINC00494-201ENST00000416742 FLOT1O75955 427 aa10.9□□□□□ -0.66
LINC00494-201ENST00000416742 EGFRP00533 1210 aa10.9□□□□□ -0.66
LINC00494-201ENST00000416742 ITGB5P18084 799 aa10.9□□□□□ -0.66
LINC00494-201ENST00000416742 PSMC2P35998 433 aaKnown RBP10.9□□□□□ -0.66
LINC00494-201ENST00000416742 BMT2Q1RMZ1 405 aa10.9□□□□□ -0.66
LINC00494-201ENST00000416742 ARHGAP27Q6ZUM4 889 aa10.9□□□□□ -0.66
LINC00494-201ENST00000416742 SLC35C1Q96A29 364 aa10.9□□□□□ -0.66
LINC00494-201ENST00000416742 KCNH7Q9NS40 1196 aa10.9□□□□□ -0.66
LINC00494-201ENST00000416742 PACSIN2Q9UNF0 486 aaPredicted RBP10.9□□□□□ -0.66
LINC00494-201ENST00000416742 COL4A5P29400 1685 aa10.9□□□□□ -0.66
LINC00494-201ENST00000416742 ICAM1P05362 532 aa10.89□□□□□ -0.67
LINC00494-201ENST00000416742 EIF2AK2P19525 551 aaKnown RBP10.89□□□□□ -0.67
LINC00494-201ENST00000416742 SLC7A5Q01650 507 aa10.89□□□□□ -0.67
LINC00494-201ENST00000416742 TNIP1Q15025 636 aa10.89□□□□□ -0.67
LINC00494-201ENST00000416742 WDR93Q6P2C0 686 aa10.89□□□□□ -0.67
LINC00494-201ENST00000416742 ZNF720Q7Z2F6 126 aa10.89□□□□□ -0.67
LINC00494-201ENST00000416742 ZNF571Q7Z3V5 609 aaPredicted RBP10.89□□□□□ -0.67
LINC00494-201ENST00000416742 RNF10Q8N5U6 811 aaKnown RBP10.89□□□□□ -0.67
LINC00494-201ENST00000416742 SPATA4Q8NEY3 305 aa10.89□□□□□ -0.67
LINC00494-201ENST00000416742 CCDC43Q96MW1 224 aaKnown RBP10.89□□□□□ -0.67
LINC00494-201ENST00000416742 LRRC1Q9BTT6 524 aa10.89□□□□□ -0.67
LINC00494-201ENST00000416742 TLR10Q9BXR5 811 aa10.89□□□□□ -0.67
LINC00494-201ENST00000416742 PLEKHA4Q9H4M7 779 aa10.89□□□□□ -0.67
LINC00494-201ENST00000416742 PIM2Q9P1W9 311 aa10.89□□□□□ -0.67
LINC00494-201ENST00000416742 LRRIQ3A6PVS8 624 aaPredicted RBP10.89□□□□□ -0.67
LINC00494-201ENST00000416742 HIP1RO75146 1068 aa10.89□□□□□ -0.67
LINC00494-201ENST00000416742 MCM3P25205 808 aa10.89□□□□□ -0.67
LINC00494-201ENST00000416742 PTGER2P43116 358 aa10.89□□□□□ -0.67
LINC00494-201ENST00000416742 SETQ01105 290 aaPredicted RBP10.89□□□□□ -0.67
LINC00494-201ENST00000416742 TBC1D10BQ4KMP7 808 aaPredicted RBP10.89□□□□□ -0.67
LINC00494-201ENST00000416742 HSP90B2PQ58FF3 399 aa10.89□□□□□ -0.67
LINC00494-201ENST00000416742 NSMFQ6X4W1 530 aa10.89□□□□□ -0.67
LINC00494-201ENST00000416742 STXBP4Q6ZWJ1 553 aa10.89□□□□□ -0.67
LINC00494-201ENST00000416742 UBXN6Q9BZV1 441 aa10.89□□□□□ -0.67
LINC00494-201ENST00000416742 VPS18Q9P253 973 aa10.89□□□□□ -0.67
LINC00494-201ENST00000416742 ZNF646O15015 1829 aaPredicted RBP10.89□□□□□ -0.67
LINC00494-201ENST00000416742 ZBTB7AO95365 584 aa10.89□□□□□ -0.67
LINC00494-201ENST00000416742 TRIM49P0CI25 452 aa10.89□□□□□ -0.67
LINC00494-201ENST00000416742 TRIM49CP0CI26 452 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms