RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 HSPA9P38646 679 aaKnown RBP8.48□□□□□ -1.05
SIK3-203ENST00000415541 COPB1P53618 953 aaKnown RBP8.48□□□□□ -1.05
SIK3-203ENST00000415541 GRIK5Q16478 980 aa8.48□□□□□ -1.05
SIK3-203ENST00000415541 CPXCR1Q8N123 301 aa8.48□□□□□ -1.05
SIK3-203ENST00000415541 SMC1BQ8NDV3 1235 aa8.48□□□□□ -1.05
SIK3-203ENST00000415541 MPHOSPH6Q99547 160 aaKnown RBP8.48□□□□□ -1.05
SIK3-203ENST00000415541 CHP1Q99653 195 aa8.48□□□□□ -1.05
SIK3-203ENST00000415541 RIOK1Q9BRS2 568 aaKnown RBP8.48□□□□□ -1.05
SIK3-203ENST00000415541 GDF3Q9NR23 364 aa8.48□□□□□ -1.05
SIK3-203ENST00000415541 PCMTD2Q9NV79 361 aa8.48□□□□□ -1.05
SIK3-203ENST00000415541 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.48□□□□□ -1.05
SIK3-203ENST00000415541 PDP2Q9P2J9 529 aa8.48□□□□□ -1.05
SIK3-203ENST00000415541 MAGEC2Q9UBF1 373 aaPredicted RBP8.48□□□□□ -1.05
SIK3-203ENST00000415541 SERTAD1Q9UHV2 236 aa8.48□□□□□ -1.05
SIK3-203ENST00000415541 SLC4A7Q9Y6M7 1214 aa8.48□□□□□ -1.05
SIK3-203ENST00000415541 COL14A1Q05707 1796 aaKnown RBP8.48□□□□□ -1.05
SIK3-203ENST00000415541 CCNT1O60563 726 aaKnown RBP8.48□□□□□ -1.05
SIK3-203ENST00000415541 BMP15O95972 392 aa8.48□□□□□ -1.05
SIK3-203ENST00000415541 SP100P23497 879 aaPredicted RBP8.48□□□□□ -1.05
SIK3-203ENST00000415541 TXKP42681 527 aa8.48□□□□□ -1.05
SIK3-203ENST00000415541 CARSP49589 748 aaKnown RBP8.48□□□□□ -1.05
SIK3-203ENST00000415541 RAD23BP54727 409 aa8.48□□□□□ -1.05
SIK3-203ENST00000415541 C12orf60Q5U649 245 aa8.48□□□□□ -1.05
SIK3-203ENST00000415541 HOOK3Q86VS8 718 aa8.48□□□□□ -1.05
SIK3-203ENST00000415541 ZNF653Q96CK0 615 aa8.48□□□□□ -1.05
SIK3-203ENST00000415541 RNF26Q9BY78 433 aaPredicted RBP8.48□□□□□ -1.05
SIK3-203ENST00000415541 RAB34Q9BZG1 259 aa8.48□□□□□ -1.05
SIK3-203ENST00000415541 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.48□□□□□ -1.05
SIK3-203ENST00000415541 SLC12A6Q9UHW9 1150 aa8.48□□□□□ -1.05
SIK3-203ENST00000415541 MAPK8IP1Q9UQF2 711 aa8.48□□□□□ -1.05
SIK3-203ENST00000415541 LAMA4Q16363 1823 aa8.48□□□□□ -1.05
SIK3-203ENST00000415541 DDAH1O94760 285 aa8.48□□□□□ -1.05
SIK3-203ENST00000415541 SUN1O94901 812 aa8.48□□□□□ -1.05
SIK3-203ENST00000415541 MYBL1P10243 752 aa8.48□□□□□ -1.05
SIK3-203ENST00000415541 FDPSP14324 419 aaKnown RBP8.48□□□□□ -1.05
SIK3-203ENST00000415541 ACADSP16219 412 aa8.48□□□□□ -1.05
SIK3-203ENST00000415541 BMP6P22004 513 aa8.48□□□□□ -1.05
SIK3-203ENST00000415541 CDC25AP30304 524 aa8.48□□□□□ -1.05
SIK3-203ENST00000415541 SESN3P58005 492 aa8.48□□□□□ -1.05
SIK3-203ENST00000415541 KRT71Q3SY84 523 aa8.48□□□□□ -1.05
SIK3-203ENST00000415541 BLIDQ8IZY5 108 aa8.48□□□□□ -1.05
SIK3-203ENST00000415541 OXER1Q8TDS5 423 aa8.48□□□□□ -1.05
SIK3-203ENST00000415541 DNAJC9Q8WXX5 260 aa8.48□□□□□ -1.05
SIK3-203ENST00000415541 CALML4Q96GE6 196 aa8.48□□□□□ -1.05
SIK3-203ENST00000415541 CCDC42Q96M95 316 aa8.48□□□□□ -1.05
SIK3-203ENST00000415541 TMEM47Q9BQJ4 181 aa8.48□□□□□ -1.05
SIK3-203ENST00000415541 FAM129AQ9BZQ8 928 aa8.48□□□□□ -1.05
SIK3-203ENST00000415541 UBE2OQ9C0C9 1292 aaKnown RBP8.48□□□□□ -1.05
SIK3-203ENST00000415541 LIMA1Q9UHB6 759 aaKnown RBP8.48□□□□□ -1.05
SIK3-203ENST00000415541 A0A1B0GVG6 124 aa8.47□□□□□ -1.05
SIK3-203ENST00000415541 LMNAP02545 664 aaKnown RBP8.47□□□□□ -1.05
SIK3-203ENST00000415541 COPS2P61201 443 aa8.47□□□□□ -1.05
SIK3-203ENST00000415541 CUL1Q13616 776 aa8.47□□□□□ -1.05
SIK3-203ENST00000415541 DALRD3Q5D0E6 543 aaKnown RBP8.47□□□□□ -1.05
SIK3-203ENST00000415541 CDKAL1Q5VV42 579 aa8.47□□□□□ -1.05
SIK3-203ENST00000415541 RRAGBQ5VZM2 374 aa8.47□□□□□ -1.05
SIK3-203ENST00000415541 POTEAQ6S8J7 498 aa8.47□□□□□ -1.05
SIK3-203ENST00000415541 EIF1ADQ8N9N8 165 aaKnown RBP8.47□□□□□ -1.05
SIK3-203ENST00000415541 UBLCP1Q8WVY7 318 aaPredicted RBP8.47□□□□□ -1.05
SIK3-203ENST00000415541 CEP95Q96GE4 821 aa8.47□□□□□ -1.05
SIK3-203ENST00000415541 RPS6KC1Q96S38 1066 aa8.47□□□□□ -1.05
SIK3-203ENST00000415541 ELAC2Q9BQ52 826 aaKnown RBP8.47□□□□□ -1.05
SIK3-203ENST00000415541 YIPF2Q9BWQ6 316 aa8.47□□□□□ -1.05
SIK3-203ENST00000415541 PIDD1Q9HB75 910 aa8.47□□□□□ -1.05
SIK3-203ENST00000415541 PIM2Q9P1W9 311 aa8.47□□□□□ -1.05
SIK3-203ENST00000415541 RFC5P40937 340 aa8.47□□□□□ -1.05
SIK3-203ENST00000415541 SARSP49591 514 aaKnown RBP8.47□□□□□ -1.05
SIK3-203ENST00000415541 HERVK_113P62684 666 aa8.47□□□□□ -1.05
SIK3-203ENST00000415541 CCDC6Q16204 474 aa8.47□□□□□ -1.05
SIK3-203ENST00000415541 CROCCP2Q86T23 111 aa8.47□□□□□ -1.05
SIK3-203ENST00000415541 SGMS1Q86VZ5 419 aa8.47□□□□□ -1.05
SIK3-203ENST00000415541 STAG2Q8N3U4 1231 aa8.47□□□□□ -1.05
SIK3-203ENST00000415541 COA7Q96BR5 231 aa8.47□□□□□ -1.05
SIK3-203ENST00000415541 TANGO6Q9C0B7 1094 aa8.47□□□□□ -1.05
SIK3-203ENST00000415541 LUC7LQ9NQ29 371 aaKnown RBP8.47□□□□□ -1.05
SIK3-203ENST00000415541 HPS5Q9UPZ3 1129 aa8.47□□□□□ -1.05
SIK3-203ENST00000415541 PCDHB6Q9Y5E3 794 aa8.47□□□□□ -1.05
SIK3-203ENST00000415541 ARFGEF2Q9Y6D5 1785 aa8.47□□□□□ -1.05
SIK3-203ENST00000415541 PAX3P23760 479 aa8.47□□□□□ -1.05
SIK3-203ENST00000415541 EIF3BP55884 814 aaKnown RBP8.47□□□□□ -1.05
SIK3-203ENST00000415541 MAGOHP61326 146 aaKnown RBP8.47□□□□□ -1.05
SIK3-203ENST00000415541 EVX2Q03828 476 aa8.47□□□□□ -1.05
SIK3-203ENST00000415541 PTGDRQ13258 359 aa8.47□□□□□ -1.05
SIK3-203ENST00000415541 PRPF4BQ13523 1007 aaKnown RBP8.47□□□□□ -1.05
SIK3-203ENST00000415541 KRT31Q15323 416 aa8.47□□□□□ -1.05
SIK3-203ENST00000415541 ABCB5Q2M3G0 1257 aa8.47□□□□□ -1.05
SIK3-203ENST00000415541 SLFN13Q68D06 897 aa8.47□□□□□ -1.05
SIK3-203ENST00000415541 PROCA1Q8NCQ7 364 aaPredicted RBP8.47□□□□□ -1.05
SIK3-203ENST00000415541 PPFIBP2Q8ND30 876 aa8.47□□□□□ -1.05
SIK3-203ENST00000415541 MAGOHBQ96A72 148 aaKnown RBP8.47□□□□□ -1.05
SIK3-203ENST00000415541 PIGSQ96S52 555 aa8.47□□□□□ -1.05
SIK3-203ENST00000415541 SELENOSQ9BQE4 189 aa8.47□□□□□ -1.05
SIK3-203ENST00000415541 TCHPQ9BT92 498 aa8.47□□□□□ -1.05
SIK3-203ENST00000415541 STMN4Q9H169 189 aaPredicted RBP8.47□□□□□ -1.05
SIK3-203ENST00000415541 KCNQ5Q9NR82 932 aa8.47□□□□□ -1.05
SIK3-203ENST00000415541 TAB2Q9NYJ8 693 aa8.47□□□□□ -1.05
SIK3-203ENST00000415541 REXO2Q9Y3B8 237 aaKnown RBP8.47□□□□□ -1.05
SIK3-203ENST00000415541 PARP4Q9UKK3 1724 aaKnown RBP8.47□□□□□ -1.05
SIK3-203ENST00000415541 AFDNP55196 1824 aaKnown RBP8.47□□□□□ -1.05
SIK3-203ENST00000415541 KIF28PB7ZC32 967 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms