RNA–Protein interactions for RNA: ENST00000414009.1

HPS1-205, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 2

Gene HPS1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-205ENST00000414009 RSPH3Q86UC2 560 aa16.52■□□□□ 0.24
HPS1-205ENST00000414009 TPH2Q8IWU9 490 aa16.52■□□□□ 0.24
HPS1-205ENST00000414009 TMEM199Q8N511 208 aa16.52■□□□□ 0.24
HPS1-205ENST00000414009 TRIM43Q96BQ3 446 aaPredicted RBP16.52■□□□□ 0.24
HPS1-205ENST00000414009 CCDC43Q96MW1 224 aaKnown RBP16.52■□□□□ 0.24
HPS1-205ENST00000414009 EIF2AK1Q9BQI3 630 aaKnown RBP16.52■□□□□ 0.24
HPS1-205ENST00000414009 ZSWIM4Q9H7M6 989 aa16.52■□□□□ 0.24
HPS1-205ENST00000414009 SEPT9Q9UHD8 586 aaPredicted RBP16.52■□□□□ 0.24
HPS1-205ENST00000414009 TRIP12Q14669 1992 aaPredicted RBP16.51■□□□□ 0.23
HPS1-205ENST00000414009 WDR81Q562E7 1941 aa16.51■□□□□ 0.23
HPS1-205ENST00000414009 DDX11L8A8MPP1 907 aa16.51■□□□□ 0.23
HPS1-205ENST00000414009 TREHO43280 583 aa16.51■□□□□ 0.23
HPS1-205ENST00000414009 F13A1P00488 732 aa16.51■□□□□ 0.23
HPS1-205ENST00000414009 FOXK1P85037 733 aa16.51■□□□□ 0.23
HPS1-205ENST00000414009 ZNF200P98182 395 aaPredicted RBP16.51■□□□□ 0.23
HPS1-205ENST00000414009 ATP2C1P98194 919 aaPredicted RBP16.51■□□□□ 0.23
HPS1-205ENST00000414009 CYP4A11Q02928 519 aa16.51■□□□□ 0.23
HPS1-205ENST00000414009 PDIA5Q14554 519 aa16.51■□□□□ 0.23
HPS1-205ENST00000414009 SF3A1Q15459 793 aaKnown RBP16.51■□□□□ 0.23
HPS1-205ENST00000414009 UGCGQ16739 394 aa16.51■□□□□ 0.23
HPS1-205ENST00000414009 ARL6IP4Q66PJ3 421 aaKnown RBP16.51■□□□□ 0.23
HPS1-205ENST00000414009 HAUS3Q68CZ6 603 aa16.51■□□□□ 0.23
HPS1-205ENST00000414009 TAF2Q6P1X5 1199 aa16.51■□□□□ 0.23
HPS1-205ENST00000414009 OTUD6AQ7L8S5 288 aa16.51■□□□□ 0.23
HPS1-205ENST00000414009 C4orf32Q8N8J7 132 aa16.51■□□□□ 0.23
HPS1-205ENST00000414009 DYDC2Q96IM9 177 aa16.51■□□□□ 0.23
HPS1-205ENST00000414009 LXNQ9BS40 222 aa16.51■□□□□ 0.23
HPS1-205ENST00000414009 LRWD1Q9UFC0 647 aa16.51■□□□□ 0.23
HPS1-205ENST00000414009 MKI67P46013 3256 aaKnown RBP16.5■□□□□ 0.23
HPS1-205ENST00000414009 HOXC8P31273 242 aa16.5■□□□□ 0.23
HPS1-205ENST00000414009 MDM2Q00987 491 aaPredicted RBP16.5■□□□□ 0.23
HPS1-205ENST00000414009 PRPF38BQ5VTL8 546 aaKnown RBP16.5■□□□□ 0.23
HPS1-205ENST00000414009 SERINC5Q86VE9 423 aa16.5■□□□□ 0.23
HPS1-205ENST00000414009 NOC4LQ9BVI4 516 aaKnown RBP16.5■□□□□ 0.23
HPS1-205ENST00000414009 RGL1Q9NZL6 768 aa16.5■□□□□ 0.23
HPS1-205ENST00000414009 VWA3AA6NCI4 1184 aa16.49■□□□□ 0.23
HPS1-205ENST00000414009 MAGEB2O15479 319 aa16.49■□□□□ 0.23
HPS1-205ENST00000414009 ZNF862O60290 1169 aa16.49■□□□□ 0.23
HPS1-205ENST00000414009 ATP4AP20648 1035 aa16.49■□□□□ 0.23
HPS1-205ENST00000414009 CYP2C18P33260 490 aa16.49■□□□□ 0.23
HPS1-205ENST00000414009 THPOP40225 353 aa16.49■□□□□ 0.23
HPS1-205ENST00000414009 CEBPZQ03701 1054 aaKnown RBP16.49■□□□□ 0.23
HPS1-205ENST00000414009 FPGSQ05932 587 aa16.49■□□□□ 0.23
HPS1-205ENST00000414009 PPIGQ13427 754 aaKnown RBP eCLIP16.49■□□□□ 0.234e-8■■□□□ 12.9
HPS1-205ENST00000414009 CTTNQ14247 550 aaKnown RBP16.49■□□□□ 0.23
HPS1-205ENST00000414009 KRT79Q5XKE5 535 aa16.49■□□□□ 0.23
HPS1-205ENST00000414009 MFSD5Q6N075 450 aa16.49■□□□□ 0.23
HPS1-205ENST00000414009 FAM173BQ6P4H8 233 aa16.49■□□□□ 0.23
HPS1-205ENST00000414009 C4orf19Q8IY42 314 aa16.49■□□□□ 0.23
HPS1-205ENST00000414009 BADQ92934 168 aa16.49■□□□□ 0.23
HPS1-205ENST00000414009 TUFT1Q9NNX1 390 aa16.49■□□□□ 0.23
HPS1-205ENST00000414009 ATP6V1DQ9Y5K8 247 aa16.49■□□□□ 0.23
HPS1-205ENST00000414009 M0QZ92 97 aa16.48■□□□□ 0.23
HPS1-205ENST00000414009 CAND2O75155 1236 aa16.48■□□□□ 0.23
HPS1-205ENST00000414009 SLITRK3O94933 977 aa16.48■□□□□ 0.23
HPS1-205ENST00000414009 PARNO95453 639 aaKnown RBP16.48■□□□□ 0.23
HPS1-205ENST00000414009 KLRC1P26715 233 aa16.48■□□□□ 0.23
HPS1-205ENST00000414009 TMOD1P28289 359 aa16.48■□□□□ 0.23
HPS1-205ENST00000414009 YWHABP31946 246 aaKnown RBP16.48■□□□□ 0.23
HPS1-205ENST00000414009 CCT6AP40227 531 aaKnown RBP16.48■□□□□ 0.23
HPS1-205ENST00000414009 MAGEA10P43363 369 aaPredicted RBP16.48■□□□□ 0.23
HPS1-205ENST00000414009 CCL23P55773 120 aa16.48■□□□□ 0.23
HPS1-205ENST00000414009 ADAM17P78536 824 aa16.48■□□□□ 0.23
HPS1-205ENST00000414009 TBC1D8BQ0IIM8 1120 aa16.48■□□□□ 0.23
HPS1-205ENST00000414009 STK38Q15208 465 aa16.48■□□□□ 0.23
HPS1-205ENST00000414009 MTERF2Q49AM1 385 aa16.48■□□□□ 0.23
HPS1-205ENST00000414009 MTHFD1LQ6UB35 978 aa16.48■□□□□ 0.23
HPS1-205ENST00000414009 EXOC8Q8IYI6 725 aa16.48■□□□□ 0.23
HPS1-205ENST00000414009 METTL13Q8N6R0 699 aa16.48■□□□□ 0.23
HPS1-205ENST00000414009 TRAPPC12Q8WVT3 735 aa16.48■□□□□ 0.23
HPS1-205ENST00000414009 JPH2Q9BR39 696 aaPredicted RBP16.48■□□□□ 0.23
HPS1-205ENST00000414009 POLR3CQ9BUI4 534 aaPredicted RBP16.48■□□□□ 0.23
HPS1-205ENST00000414009 CLIC4Q9Y696 253 aa16.48■□□□□ 0.23
HPS1-205ENST00000414009 CEP290O15078 2479 aa16.47■□□□□ 0.23
HPS1-205ENST00000414009 SMIM35A0A1B0GVV1 85 aa16.47■□□□□ 0.23
HPS1-205ENST00000414009 MBLAC1A4D2B0 266 aaPredicted RBP16.47■□□□□ 0.23
HPS1-205ENST00000414009 CKBP12277 381 aa16.47■□□□□ 0.23
HPS1-205ENST00000414009 SELPP16109 830 aa16.47■□□□□ 0.23
HPS1-205ENST00000414009 MUTP22033 750 aa16.47■□□□□ 0.23
HPS1-205ENST00000414009 RFC2P35250 354 aa16.47■□□□□ 0.23
HPS1-205ENST00000414009 DSG2Q14126 1118 aa16.47■□□□□ 0.23
HPS1-205ENST00000414009 HIC1Q14526 733 aa16.47■□□□□ 0.23
HPS1-205ENST00000414009 FOXD4L6Q3SYB3 417 aaPredicted RBP16.47■□□□□ 0.23
HPS1-205ENST00000414009 XKR9Q5GH70 373 aa16.47■□□□□ 0.23
HPS1-205ENST00000414009 MARCH8Q5T0T0 291 aa16.47■□□□□ 0.23
HPS1-205ENST00000414009 ATL3Q6DD88 541 aa16.47■□□□□ 0.23
HPS1-205ENST00000414009 FOXD4L3Q6VB84 417 aaPredicted RBP16.47■□□□□ 0.23
HPS1-205ENST00000414009 LRRC8DQ7L1W4 858 aa16.47■□□□□ 0.23
HPS1-205ENST00000414009 RPUSD2Q8IZ73 545 aaKnown RBP16.47■□□□□ 0.23
HPS1-205ENST00000414009 IGSF22Q8N9C0 903 aa16.47■□□□□ 0.23
HPS1-205ENST00000414009 SNX29Q8TEQ0 813 aa16.47■□□□□ 0.23
HPS1-205ENST00000414009 CDK5RAP3Q96JB5 506 aa16.47■□□□□ 0.23
HPS1-205ENST00000414009 CEP170P1Q96L14 293 aa16.47■□□□□ 0.23
HPS1-205ENST00000414009 AK8Q96MA6 479 aa16.47■□□□□ 0.23
HPS1-205ENST00000414009 MAP7D2Q96T17 732 aa16.47■□□□□ 0.23
HPS1-205ENST00000414009 HSD17B14Q9BPX1 270 aa16.47■□□□□ 0.23
HPS1-205ENST00000414009 NIFKQ9BYG3 293 aaKnown RBP16.47■□□□□ 0.23
HPS1-205ENST00000414009 UBE2OQ9C0C9 1292 aaKnown RBP16.47■□□□□ 0.23
HPS1-205ENST00000414009 FAM49AQ9H0Q0 323 aaPredicted RBP16.47■□□□□ 0.23
HPS1-205ENST00000414009 RYDENQ9NUL5 291 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms