RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 CACNA1HO95180 2353 aa9.49□□□□□ -0.89
UPF3AP1-201ENST00000413731 EVPLQ92817 2033 aa9.48□□□□□ -0.89
UPF3AP1-201ENST00000413731 GCOM1H8Y6P7 765 aaPredicted RBP9.48□□□□□ -0.89
UPF3AP1-201ENST00000413731 LINC01565O15544 149 aa9.48□□□□□ -0.89
UPF3AP1-201ENST00000413731 POLR2MP0CAP2 368 aa9.48□□□□□ -0.89
UPF3AP1-201ENST00000413731 TGFB3P10600 412 aa9.48□□□□□ -0.89
UPF3AP1-201ENST00000413731 ADAM17P78536 824 aa9.48□□□□□ -0.89
UPF3AP1-201ENST00000413731 MRPS9P82933 396 aaKnown RBP9.48□□□□□ -0.89
UPF3AP1-201ENST00000413731 SP4Q02446 784 aa9.48□□□□□ -0.89
UPF3AP1-201ENST00000413731 SMAD4Q13485 552 aaKnown RBP9.48□□□□□ -0.89
UPF3AP1-201ENST00000413731 GRM4Q14833 912 aa9.48□□□□□ -0.89
UPF3AP1-201ENST00000413731 SEC23AQ15436 765 aa9.48□□□□□ -0.89
UPF3AP1-201ENST00000413731 SMAD2Q15796 467 aaKnown RBP9.48□□□□□ -0.89
UPF3AP1-201ENST00000413731 FAM26DQ5JW98 314 aa9.48□□□□□ -0.89
UPF3AP1-201ENST00000413731 UTP14CQ5TAP6 766 aaKnown RBP9.48□□□□□ -0.89
UPF3AP1-201ENST00000413731 METTL7BQ6UX53 244 aa9.48□□□□□ -0.89
UPF3AP1-201ENST00000413731 RUFY4Q6ZNE9 571 aa9.48□□□□□ -0.89
UPF3AP1-201ENST00000413731 CYFIP1Q7L576 1253 aa9.48□□□□□ -0.89
UPF3AP1-201ENST00000413731 CATIPQ7Z7H3 387 aa9.48□□□□□ -0.89
UPF3AP1-201ENST00000413731 DEPDC4Q8N2C3 294 aa9.48□□□□□ -0.89
UPF3AP1-201ENST00000413731 FIBCD1Q8N539 461 aa9.48□□□□□ -0.89
UPF3AP1-201ENST00000413731 IL17RAQ96F46 866 aa9.48□□□□□ -0.89
UPF3AP1-201ENST00000413731 INPP4AQ96PE3 977 aaPredicted RBP9.48□□□□□ -0.89
UPF3AP1-201ENST00000413731 PIGSQ96S52 555 aa9.48□□□□□ -0.89
UPF3AP1-201ENST00000413731 GPR20Q99678 358 aa9.48□□□□□ -0.89
UPF3AP1-201ENST00000413731 C11orf84Q9BUA3 381 aaPredicted RBP9.48□□□□□ -0.89
UPF3AP1-201ENST00000413731 KCNH6Q9H252 994 aa9.48□□□□□ -0.89
UPF3AP1-201ENST00000413731 MAP3K20Q9NYL2 800 aaKnown RBP9.48□□□□□ -0.89
UPF3AP1-201ENST00000413731 FKBPLQ9UIM3 349 aa9.48□□□□□ -0.89
UPF3AP1-201ENST00000413731 SLC27A5Q9Y2P5 690 aa9.48□□□□□ -0.89
UPF3AP1-201ENST00000413731 PLXNA3P51805 1871 aa9.48□□□□□ -0.89
UPF3AP1-201ENST00000413731 CCDC69A6NI79 296 aa9.47□□□□□ -0.89
UPF3AP1-201ENST00000413731 SH2B2O14492 632 aaPredicted RBP9.47□□□□□ -0.89
UPF3AP1-201ENST00000413731 CYTH3O43739 400 aa9.47□□□□□ -0.89
UPF3AP1-201ENST00000413731 CHRNA1P02708 482 aa9.47□□□□□ -0.89
UPF3AP1-201ENST00000413731 MMP1P03956 469 aa9.47□□□□□ -0.89
UPF3AP1-201ENST00000413731 ICAM3P32942 547 aa9.47□□□□□ -0.89
UPF3AP1-201ENST00000413731 HSPA4P34932 840 aa9.47□□□□□ -0.89
UPF3AP1-201ENST00000413731 BMPR1AP36894 532 aa9.47□□□□□ -0.89
UPF3AP1-201ENST00000413731 FGD1P98174 961 aa9.47□□□□□ -0.89
UPF3AP1-201ENST00000413731 MGAT3Q09327 533 aa9.47□□□□□ -0.89
UPF3AP1-201ENST00000413731 LPIN1Q14693 890 aa9.47□□□□□ -0.89
UPF3AP1-201ENST00000413731 GNPTABQ3T906 1256 aa9.47□□□□□ -0.89
UPF3AP1-201ENST00000413731 HERC4Q5GLZ8 1057 aaPredicted RBP9.47□□□□□ -0.89
UPF3AP1-201ENST00000413731 MAMSTRQ6ZN01 415 aa9.47□□□□□ -0.89
UPF3AP1-201ENST00000413731 SAMD3Q8N6K7 520 aa9.47□□□□□ -0.89
UPF3AP1-201ENST00000413731 PRSS33Q8NF86 280 aa9.47□□□□□ -0.89
UPF3AP1-201ENST00000413731 CTCFLQ8NI51 663 aaPredicted RBP9.47□□□□□ -0.89
UPF3AP1-201ENST00000413731 LINC01599Q8WXQ3 324 aa9.47□□□□□ -0.89
UPF3AP1-201ENST00000413731 TMEM87BQ96K49 555 aa9.47□□□□□ -0.89
UPF3AP1-201ENST00000413731 JAKMIP1Q96N16 626 aaKnown RBP9.47□□□□□ -0.89
UPF3AP1-201ENST00000413731 NEK1Q96PY6 1258 aa9.47□□□□□ -0.89
UPF3AP1-201ENST00000413731 LRRC2Q9BYS8 371 aa9.47□□□□□ -0.89
UPF3AP1-201ENST00000413731 LMAN2LQ9H0V9 348 aa9.47□□□□□ -0.89
UPF3AP1-201ENST00000413731 IGFLR1Q9H665 355 aa9.47□□□□□ -0.89
UPF3AP1-201ENST00000413731 SENP2Q9HC62 589 aa9.47□□□□□ -0.89
UPF3AP1-201ENST00000413731 RTEL1Q9NZ71 1219 aa9.47□□□□□ -0.89
UPF3AP1-201ENST00000413731 CD207Q9UJ71 328 aa9.47□□□□□ -0.89
UPF3AP1-201ENST00000413731 ZNF215Q9UL58 517 aaPredicted RBP9.47□□□□□ -0.89
UPF3AP1-201ENST00000413731 WDR81Q562E7 1941 aa9.46□□□□□ -0.89
UPF3AP1-201ENST00000413731 SPATA31C2B4DYI2 1134 aa9.46□□□□□ -0.9
UPF3AP1-201ENST00000413731 ARHGAP33O14559 1287 aa9.46□□□□□ -0.9
UPF3AP1-201ENST00000413731 FIBPO43427 364 aa9.46□□□□□ -0.9
UPF3AP1-201ENST00000413731 NCK2O43639 380 aa9.46□□□□□ -0.9
UPF3AP1-201ENST00000413731 DDAH1O94760 285 aa9.46□□□□□ -0.9
UPF3AP1-201ENST00000413731 RB1P06400 928 aa9.46□□□□□ -0.9
UPF3AP1-201ENST00000413731 GNAT1P11488 350 aa9.46□□□□□ -0.9
UPF3AP1-201ENST00000413731 MARK3P27448 753 aa9.46□□□□□ -0.9
UPF3AP1-201ENST00000413731 CAMK1Q14012 370 aa9.46□□□□□ -0.9
UPF3AP1-201ENST00000413731 NEDD9Q14511 834 aa9.46□□□□□ -0.9
UPF3AP1-201ENST00000413731 ADCK5Q3MIX3 580 aa9.46□□□□□ -0.9
UPF3AP1-201ENST00000413731 ADGRD2Q7Z7M1 963 aa9.46□□□□□ -0.9
UPF3AP1-201ENST00000413731 RNF135Q8IUD6 432 aa9.46□□□□□ -0.9
UPF3AP1-201ENST00000413731 ZNF654Q8IZM8 581 aa9.46□□□□□ -0.9
UPF3AP1-201ENST00000413731 CLP1Q92989 425 aaKnown RBP9.46□□□□□ -0.9
UPF3AP1-201ENST00000413731 ZNF689Q96CS4 500 aaPredicted RBP9.46□□□□□ -0.9
UPF3AP1-201ENST00000413731 TCEANC2Q96MN5 208 aa9.46□□□□□ -0.9
UPF3AP1-201ENST00000413731 POP1Q99575 1024 aaKnown RBP9.46□□□□□ -0.9
UPF3AP1-201ENST00000413731 MTA3Q9BTC8 594 aa9.46□□□□□ -0.9
UPF3AP1-201ENST00000413731 MYL10Q9BUA6 226 aa9.46□□□□□ -0.9
UPF3AP1-201ENST00000413731 USP26Q9BXU7 913 aa9.46□□□□□ -0.9
UPF3AP1-201ENST00000413731 UPF3BQ9BZI7 483 aaKnown RBP9.46□□□□□ -0.9
UPF3AP1-201ENST00000413731 RIOX1Q9H6W3 641 aa9.46□□□□□ -0.9
UPF3AP1-201ENST00000413731 EHMT1Q9H9B1 1298 aa9.46□□□□□ -0.9
UPF3AP1-201ENST00000413731 LY9Q9HBG7 655 aa9.46□□□□□ -0.9
UPF3AP1-201ENST00000413731 ALG13Q9NP73 1137 aaKnown RBP9.46□□□□□ -0.9
UPF3AP1-201ENST00000413731 RWDD3Q9Y3V2 267 aa9.46□□□□□ -0.9
UPF3AP1-201ENST00000413731 MRPL42Q9Y6G3 142 aaKnown RBP9.46□□□□□ -0.9
UPF3AP1-201ENST00000413731 MYH9P35579 1960 aaKnown RBP9.45□□□□□ -0.9
UPF3AP1-201ENST00000413731 STXBP3O00186 592 aa9.45□□□□□ -0.9
UPF3AP1-201ENST00000413731 EIF5BO60841 1220 aaKnown RBP9.45□□□□□ -0.9
UPF3AP1-201ENST00000413731 HMGB1P09429 215 aaKnown RBP9.45□□□□□ -0.9
UPF3AP1-201ENST00000413731 DNAJB1P25685 340 aa9.45□□□□□ -0.9
UPF3AP1-201ENST00000413731 KIF5BP33176 963 aa9.45□□□□□ -0.9
UPF3AP1-201ENST00000413731 NDUFV1P49821 464 aa9.45□□□□□ -0.9
UPF3AP1-201ENST00000413731 PPFIA1Q13136 1202 aa9.45□□□□□ -0.9
UPF3AP1-201ENST00000413731 COL9A3Q14050 684 aaPredicted RBP9.45□□□□□ -0.9
UPF3AP1-201ENST00000413731 BTG3Q14201 252 aaPredicted RBP9.45□□□□□ -0.9
UPF3AP1-201ENST00000413731 FBXO47Q5MNV8 452 aa9.45□□□□□ -0.9
UPF3AP1-201ENST00000413731 BLOC1S2Q6QNY1 142 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms