RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 PCDHB13Q9Y5F0 798 aa12.58□□□□□ -0.4
TRAFD1-202ENST00000412615 PCDHGC5Q9Y5F6 944 aa12.58□□□□□ -0.4
TRAFD1-202ENST00000412615 ATAD5Q96QE3 1844 aa12.58□□□□□ -0.4
TRAFD1-202ENST00000412615 A0A0U1RQG5 324 aaPredicted RBP12.58□□□□□ -0.4
TRAFD1-202ENST00000412615 CLIC2O15247 247 aa12.58□□□□□ -0.4
TRAFD1-202ENST00000412615 TGFB1I1O43294 461 aa12.58□□□□□ -0.4
TRAFD1-202ENST00000412615 PALMO75781 387 aa12.58□□□□□ -0.4
TRAFD1-202ENST00000412615 ANXA13P27216 316 aa12.58□□□□□ -0.4
TRAFD1-202ENST00000412615 PSMC2P35998 433 aaKnown RBP12.58□□□□□ -0.4
TRAFD1-202ENST00000412615 CASP4P49662 377 aa12.58□□□□□ -0.4
TRAFD1-202ENST00000412615 PTK2Q05397 1052 aa12.58□□□□□ -0.4
TRAFD1-202ENST00000412615 LRRC1Q9BTT6 524 aa12.58□□□□□ -0.4
TRAFD1-202ENST00000412615 BTNL10A8MVZ5 291 aa12.57□□□□□ -0.4
TRAFD1-202ENST00000412615 N4BP1O75113 896 aaKnown RBP12.57□□□□□ -0.4
TRAFD1-202ENST00000412615 CAP2P40123 477 aa12.57□□□□□ -0.4
TRAFD1-202ENST00000412615 PRKCIP41743 596 aa12.57□□□□□ -0.4
TRAFD1-202ENST00000412615 AARSP49588 968 aaKnown RBP eCLIP12.57□□□□□ -0.4
TRAFD1-202ENST00000412615 UBXN2AP68543 259 aa12.57□□□□□ -0.4
TRAFD1-202ENST00000412615 KCNA1Q09470 495 aa12.57□□□□□ -0.4
TRAFD1-202ENST00000412615 ZYXQ15942 572 aaKnown RBP12.57□□□□□ -0.4
TRAFD1-202ENST00000412615 TAF3Q5VWG9 929 aa12.57□□□□□ -0.4
TRAFD1-202ENST00000412615 FAM83AQ86UY5 434 aa12.57□□□□□ -0.4
TRAFD1-202ENST00000412615 LDHDQ86WU2 507 aa12.57□□□□□ -0.4
TRAFD1-202ENST00000412615 MKNK1Q9BUB5 465 aa12.57□□□□□ -0.4
TRAFD1-202ENST00000412615 TEKT3Q9BXF9 490 aa12.57□□□□□ -0.4
TRAFD1-202ENST00000412615 ODF2LQ9ULJ1 636 aa12.57□□□□□ -0.4
TRAFD1-202ENST00000412615 UBE4BO95155 1302 aa12.57□□□□□ -0.4
TRAFD1-202ENST00000412615 NMT1P30419 496 aaKnown RBP12.57□□□□□ -0.4
TRAFD1-202ENST00000412615 MATR3P43243 847 aaKnown RBP eCLIP12.57□□□□□ -0.4
TRAFD1-202ENST00000412615 GYS2P54840 703 aa12.57□□□□□ -0.4
TRAFD1-202ENST00000412615 GLE1Q53GS7 698 aaKnown RBP12.57□□□□□ -0.4
TRAFD1-202ENST00000412615 SLC30A10Q6XR72 485 aa12.57□□□□□ -0.4
TRAFD1-202ENST00000412615 HS2ST1Q7LGA3 356 aa12.57□□□□□ -0.4
TRAFD1-202ENST00000412615 DEFB129Q9H1M3 183 aa12.57□□□□□ -0.4
TRAFD1-202ENST00000412615 BCAS3Q9H6U6 928 aa12.57□□□□□ -0.4
TRAFD1-202ENST00000412615 ZBTB12Q9Y330 459 aaPredicted RBP12.57□□□□□ -0.4
TRAFD1-202ENST00000412615 FRMPD4Q14CM0 1322 aa12.57□□□□□ -0.4
TRAFD1-202ENST00000412615 ARP10275 920 aa12.56□□□□□ -0.4
TRAFD1-202ENST00000412615 RXRBP28702 533 aa12.56□□□□□ -0.4
TRAFD1-202ENST00000412615 ZNF131P52739 623 aa12.56□□□□□ -0.4
TRAFD1-202ENST00000412615 IFI16Q16666 785 aaKnown RBP12.56□□□□□ -0.4
TRAFD1-202ENST00000412615 MEI1Q5TIA1 1274 aa12.56□□□□□ -0.4
TRAFD1-202ENST00000412615 MIGA2Q7L4E1 593 aa12.56□□□□□ -0.4
TRAFD1-202ENST00000412615 ZNF720Q7Z2F6 126 aa12.56□□□□□ -0.4
TRAFD1-202ENST00000412615 ZNF571Q7Z3V5 609 aaPredicted RBP12.56□□□□□ -0.4
TRAFD1-202ENST00000412615 VPS36Q86VN1 386 aa12.56□□□□□ -0.4
TRAFD1-202ENST00000412615 FAM178BQ8IXR5 827 aa12.56□□□□□ -0.4
TRAFD1-202ENST00000412615 FAM186BQ8IYM0 893 aa12.56□□□□□ -0.4
TRAFD1-202ENST00000412615 MTMR14Q8NCE2 650 aa12.56□□□□□ -0.4
TRAFD1-202ENST00000412615 BORCS6Q96GS4 357 aa12.56□□□□□ -0.4
TRAFD1-202ENST00000412615 RIT2Q99578 217 aa12.56□□□□□ -0.4
TRAFD1-202ENST00000412615 SELENOOQ9BVL4 669 aa12.56□□□□□ -0.4
TRAFD1-202ENST00000412615 TMEM39BQ9GZU3 492 aa12.56□□□□□ -0.4
TRAFD1-202ENST00000412615 UNC45AQ9H3U1 944 aa12.56□□□□□ -0.4
TRAFD1-202ENST00000412615 HPCAL4Q9UM19 191 aa12.56□□□□□ -0.4
TRAFD1-202ENST00000412615 FAN1Q9Y2M0 1017 aa12.56□□□□□ -0.4
TRAFD1-202ENST00000412615 IPO5O00410 1097 aaKnown RBP12.56□□□□□ -0.4
TRAFD1-202ENST00000412615 FLOT1O75955 427 aa12.56□□□□□ -0.4
TRAFD1-202ENST00000412615 ASNSP08243 561 aa12.56□□□□□ -0.4
TRAFD1-202ENST00000412615 SAMD1Q6SPF0 538 aaPredicted RBP12.56□□□□□ -0.4
TRAFD1-202ENST00000412615 NEK9Q8TD19 979 aa12.56□□□□□ -0.4
TRAFD1-202ENST00000412615 MXRA8Q9BRK3 442 aa12.56□□□□□ -0.4
TRAFD1-202ENST00000412615 VPS33BQ9H267 617 aa12.56□□□□□ -0.4
TRAFD1-202ENST00000412615 GCNT4Q9P109 453 aa12.56□□□□□ -0.4
TRAFD1-202ENST00000412615 ZBTB39O15060 712 aa12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 MYBL2P10244 700 aa12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 POLD1P28340 1107 aa12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 ZC2HC1CQ53FD0 456 aaPredicted RBP12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 B3GNT9Q6UX72 402 aa12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 AGBL3Q8NEM8 1001 aa12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 AENQ8WTP8 325 aaKnown RBP12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 PACSIN1Q9BY11 444 aa12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 SIX2Q9NPC8 291 aa12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 ZNF277Q9NRM2 450 aaPredicted RBP12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 FBXO28Q9NVF7 368 aa12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 STIM2Q9P246 746 aa12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 DMGDHQ9UI17 866 aaKnown RBP12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 NAGPAQ9UK23 515 aa12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 ZMYM2Q9UBW7 1377 aa12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 GRID2IPA4D2P6 1211 aa12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 FTCDO95954 541 aa12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 GUCY2CP25092 1073 aa12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 JAM2P57087 298 aa12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 EZH2Q15910 746 aaKnown RBP12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 ODR4Q5SWX8 454 aa12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 C8orf74Q6P047 294 aa12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 GOLGA5Q8TBA6 731 aa12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 RBM46Q8TBY0 533 aaKnown RBP12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 HDAC7Q8WUI4 952 aa12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 EHD2Q9NZN4 543 aa12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 CALCOCO1Q9P1Z2 691 aa12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 MYH10P35580 1976 aa12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 PSME4Q14997 1843 aa12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 ARHGEF35A5YM69 484 aa12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 ICAM1P05362 532 aa12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 FERP16591 822 aa12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 PTGER2P43116 358 aa12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 LMAN1P49257 510 aa12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 HSD17B4P51659 736 aa12.55□□□□□ -0.4
TRAFD1-202ENST00000412615 MAP3K10Q02779 954 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms