RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 CEP131Q9UPN4 1083 aa14.78□□□□□ -0.04
HDAC8-210ENST00000412342 MICAL3Q7RTP6 2002 aa14.77□□□□□ -0.04
HDAC8-210ENST00000412342 RSPH10B2B2RC85 870 aa14.77□□□□□ -0.05
HDAC8-210ENST00000412342 LAD1O00515 517 aa14.77□□□□□ -0.05
HDAC8-210ENST00000412342 PARNO95453 639 aaKnown RBP14.77□□□□□ -0.05
HDAC8-210ENST00000412342 CHRNA1P02708 482 aa14.77□□□□□ -0.05
HDAC8-210ENST00000412342 PFKMP08237 780 aa14.77□□□□□ -0.05
HDAC8-210ENST00000412342 CTSHP09668 335 aa14.77□□□□□ -0.05
HDAC8-210ENST00000412342 RSPH10BP0C881 870 aa14.77□□□□□ -0.05
HDAC8-210ENST00000412342 SPATA31C1P0DKV0 1188 aa14.77□□□□□ -0.05
HDAC8-210ENST00000412342 PRPHP41219 470 aa14.77□□□□□ -0.05
HDAC8-210ENST00000412342 TECP42680 631 aa14.77□□□□□ -0.05
HDAC8-210ENST00000412342 CYP4A11Q02928 519 aa14.77□□□□□ -0.05
HDAC8-210ENST00000412342 CTTNQ14247 550 aaKnown RBP14.77□□□□□ -0.05
HDAC8-210ENST00000412342 LRIT3Q3SXY7 679 aa14.77□□□□□ -0.05
HDAC8-210ENST00000412342 DEFB128Q7Z7B8 93 aa14.77□□□□□ -0.05
HDAC8-210ENST00000412342 KIAA0319LQ8IZA0 1049 aa14.77□□□□□ -0.05
HDAC8-210ENST00000412342 IGSF22Q8N9C0 903 aa14.77□□□□□ -0.05
HDAC8-210ENST00000412342 NEK9Q8TD19 979 aa14.77□□□□□ -0.05
HDAC8-210ENST00000412342 HERVK_113Q902F9 699 aa14.77□□□□□ -0.05
HDAC8-210ENST00000412342 SH2D3AQ9BRG2 576 aa14.77□□□□□ -0.05
HDAC8-210ENST00000412342 FAM49AQ9H0Q0 323 aaPredicted RBP14.77□□□□□ -0.05
HDAC8-210ENST00000412342 ZSWIM4Q9H7M6 989 aa14.77□□□□□ -0.05
HDAC8-210ENST00000412342 SEPT9Q9UHD8 586 aaPredicted RBP14.77□□□□□ -0.05
HDAC8-210ENST00000412342 GBF1Q92538 1859 aa14.76□□□□□ -0.05
HDAC8-210ENST00000412342 IGKV6-21A0A0C4DH24 114 aa14.76□□□□□ -0.05
HDAC8-210ENST00000412342 ZBTB39O15060 712 aa14.76□□□□□ -0.05
HDAC8-210ENST00000412342 DKC1O60832 514 aaKnown RBP eCLIP14.76□□□□□ -0.05
HDAC8-210ENST00000412342 MED24O75448 989 aa14.76□□□□□ -0.05
HDAC8-210ENST00000412342 RPLP2P05387 115 aaKnown RBP14.76□□□□□ -0.05
HDAC8-210ENST00000412342 MKRN4PQ13434 485 aaPredicted RBP14.76□□□□□ -0.05
HDAC8-210ENST00000412342 PLA2G4FQ68DD2 849 aa14.76□□□□□ -0.05
HDAC8-210ENST00000412342 FAM173BQ6P4H8 233 aa14.76□□□□□ -0.05
HDAC8-210ENST00000412342 RPUSD2Q8IZ73 545 aaKnown RBP14.76□□□□□ -0.05
HDAC8-210ENST00000412342 ZNF579Q8NAF0 562 aaKnown RBP14.76□□□□□ -0.05
HDAC8-210ENST00000412342 CXXC1Q9P0U4 656 aaPredicted RBP14.76□□□□□ -0.05
HDAC8-210ENST00000412342 KDM3AQ9Y4C1 1321 aa14.75□□□□□ -0.05
HDAC8-210ENST00000412342 SOX1O00570 391 aaPredicted RBP14.75□□□□□ -0.05
HDAC8-210ENST00000412342 MAGEB2O15479 319 aa14.75□□□□□ -0.05
HDAC8-210ENST00000412342 FGBP02675 491 aa14.75□□□□□ -0.05
HDAC8-210ENST00000412342 YWHABP31946 246 aaKnown RBP14.75□□□□□ -0.05
HDAC8-210ENST00000412342 NPEPPSP55786 919 aa14.75□□□□□ -0.05
HDAC8-210ENST00000412342 MRPS6P82932 125 aaKnown RBP14.75□□□□□ -0.05
HDAC8-210ENST00000412342 PKP1Q13835 747 aa14.75□□□□□ -0.05
HDAC8-210ENST00000412342 MTERF2Q49AM1 385 aa14.75□□□□□ -0.05
HDAC8-210ENST00000412342 PLEKHG4Q58EX7 1191 aa14.75□□□□□ -0.05
HDAC8-210ENST00000412342 CATSPER3Q86XQ3 398 aa14.75□□□□□ -0.05
HDAC8-210ENST00000412342 RNPC3Q96LT9 517 aaKnown RBP14.75□□□□□ -0.05
HDAC8-210ENST00000412342 POLR3CQ9BUI4 534 aaPredicted RBP14.75□□□□□ -0.05
HDAC8-210ENST00000412342 FTOQ9C0B1 505 aaKnown RBP eCLIP14.75□□□□□ -0.05
HDAC8-210ENST00000412342 CYP26B1Q9NR63 512 aa14.75□□□□□ -0.05
HDAC8-210ENST00000412342 CDY2AQ9Y6F7 541 aa14.75□□□□□ -0.05
HDAC8-210ENST00000412342 DDX11L8A8MPP1 907 aa14.74□□□□□ -0.05
HDAC8-210ENST00000412342 MAFO75444 373 aaPredicted RBP14.74□□□□□ -0.05
HDAC8-210ENST00000412342 RPA1P27694 616 aa14.74□□□□□ -0.05
HDAC8-210ENST00000412342 FXR1P51114 621 aaKnown RBP eCLIP14.74□□□□□ -0.05
HDAC8-210ENST00000412342 CLCN3P51790 818 aa14.74□□□□□ -0.05
HDAC8-210ENST00000412342 TMEM62Q0P6H9 643 aa14.74□□□□□ -0.05
HDAC8-210ENST00000412342 DRP2Q13474 957 aa14.74□□□□□ -0.05
HDAC8-210ENST00000412342 PDIA5Q14554 519 aa14.74□□□□□ -0.05
HDAC8-210ENST00000412342 LPIN1Q14693 890 aa14.74□□□□□ -0.05
HDAC8-210ENST00000412342 PTPAQ15257 358 aa14.74□□□□□ -0.05
HDAC8-210ENST00000412342 ECM1Q16610 540 aa14.74□□□□□ -0.05
HDAC8-210ENST00000412342 TMEM266Q2M3C6 531 aa14.74□□□□□ -0.05
HDAC8-210ENST00000412342 FBXO47Q5MNV8 452 aa14.74□□□□□ -0.05
HDAC8-210ENST00000412342 OTOP2Q7RTS6 562 aa14.74□□□□□ -0.05
HDAC8-210ENST00000412342 RSPH3Q86UC2 560 aa14.74□□□□□ -0.05
HDAC8-210ENST00000412342 TPH2Q8IWU9 490 aa14.74□□□□□ -0.05
HDAC8-210ENST00000412342 NME8Q8N427 588 aa14.74□□□□□ -0.05
HDAC8-210ENST00000412342 LRRC71Q8N4P6 559 aa14.74□□□□□ -0.05
HDAC8-210ENST00000412342 SPRYD3Q8NCJ5 442 aa14.74□□□□□ -0.05
HDAC8-210ENST00000412342 MMTAG2Q9BU76 263 aaKnown RBP14.74□□□□□ -0.05
HDAC8-210ENST00000412342 DHX33Q9H6R0 707 aaKnown RBP14.74□□□□□ -0.05
HDAC8-210ENST00000412342 TUFT1Q9NNX1 390 aa14.74□□□□□ -0.05
HDAC8-210ENST00000412342 TRPV2Q9Y5S1 764 aa14.74□□□□□ -0.05
HDAC8-210ENST00000412342 PP2D1A8MPX8 630 aa14.73□□□□□ -0.05
HDAC8-210ENST00000412342 HSP90AA1P07900 732 aaKnown RBP14.73□□□□□ -0.05
HDAC8-210ENST00000412342 TBC1D8BQ0IIM8 1120 aa14.73□□□□□ -0.05
HDAC8-210ENST00000412342 SF3A1Q15459 793 aaKnown RBP14.73□□□□□ -0.05
HDAC8-210ENST00000412342 IER5Q5VY09 327 aa14.73□□□□□ -0.05
HDAC8-210ENST00000412342 ARL6IP4Q66PJ3 421 aaKnown RBP14.73□□□□□ -0.05
HDAC8-210ENST00000412342 FAM109BQ6ICB4 259 aaPredicted RBP14.73□□□□□ -0.05
HDAC8-210ENST00000412342 EFCAB12Q6NXP0 572 aa14.73□□□□□ -0.05
HDAC8-210ENST00000412342 CNKSR3Q6P9H4 555 aa14.73□□□□□ -0.05
HDAC8-210ENST00000412342 DTHD1Q6ZMT9 781 aa14.73□□□□□ -0.05
HDAC8-210ENST00000412342 DBF4BQ8NFT6 615 aa14.73□□□□□ -0.05
HDAC8-210ENST00000412342 CELF4Q9BZC1 486 aaKnown RBP14.73□□□□□ -0.05
HDAC8-210ENST00000412342 ZSCAN16Q9H4T2 348 aaPredicted RBP14.73□□□□□ -0.05
HDAC8-210ENST00000412342 ANKEF1Q9NU02 776 aa14.73□□□□□ -0.05
HDAC8-210ENST00000412342 LRWD1Q9UFC0 647 aa14.73□□□□□ -0.05
HDAC8-210ENST00000412342 PPME1Q9Y570 386 aa14.73□□□□□ -0.05
HDAC8-210ENST00000412342 CLIC4Q9Y696 253 aa14.73□□□□□ -0.05
HDAC8-210ENST00000412342 LAMA2P24043 3122 aaKnown RBP14.73□□□□□ -0.05
HDAC8-210ENST00000412342 A0A087WWV3 80 aa14.72□□□□□ -0.05
HDAC8-210ENST00000412342 GPR32O75388 356 aa14.72□□□□□ -0.05
HDAC8-210ENST00000412342 BAIAP3O94812 1187 aa14.72□□□□□ -0.05
HDAC8-210ENST00000412342 BMP15O95972 392 aa14.72□□□□□ -0.05
HDAC8-210ENST00000412342 VTNP04004 478 aa14.72□□□□□ -0.05
HDAC8-210ENST00000412342 GHRP10912 638 aa14.72□□□□□ -0.05
HDAC8-210ENST00000412342 PDIA4P13667 645 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms