RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 SIX5Q8N196 739 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 NME8Q8N427 588 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 DCLK2Q8N568 766 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 PI4K2BQ8TCG2 481 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 LINC01599Q8WXQ3 324 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 RIN2Q8WYP3 895 aaPredicted RBP2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 SECISBP2LQ93073 1101 aaKnown RBP2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 EVI5LQ96CN4 794 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 CHAMP1Q96JM3 812 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 CDHR1Q96JP9 859 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 ZNF558Q96NG5 402 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 ZSCAN10Q96SZ4 725 aaPredicted RBP2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 ADAM2Q99965 735 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 ZKSCAN3Q9BRR0 538 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 CELF4Q9BZC1 486 aaKnown RBP2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 TMEM117Q9H0C3 514 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 FAM49AQ9H0Q0 323 aaPredicted RBP2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 AZI2Q9H6S1 392 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 ELAC1Q9H777 363 aaKnown RBP2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 ATP6V0A4Q9HBG4 840 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 ERVK-5Q9HDB9 667 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 RGS18Q9NS28 235 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 DZANK1Q9NVP4 752 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 TMEM161AQ9NX61 479 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 RTEL1Q9NZ71 1219 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 SPG21Q9NZD8 308 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 IGSF9Q9P2J2 1179 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 CDH22Q9UJ99 828 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 CDV3Q9UKY7 258 aaKnown RBP2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 DUSP12Q9UNI6 340 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 GINS2Q9Y248 185 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 PCDHA2Q9Y5H9 948 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 HCFC2Q9Y5Z7 792 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 R4GN57 208 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 MYH8P13535 1937 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 SDK1Q7Z5N4 2213 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 WDR87Q6ZQQ6 2873 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 CEP295Q9C0D2 2601 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 USP24Q9UPU5 2620 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 ZMYM6O95789 1325 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 PTPRSQ13332 1948 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 MYH4Q9Y623 1939 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 CFAP47Q6ZTR5 3102 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 PNMA6FA0A0J9YX94 578 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 SMIM35A0A1B0GVV1 85 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 GSTTP1A0A1W2PQM5 241 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 CARNS1A5YM72 827 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 C2orf71A6NGG8 1288 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 SPDYE4A6NLX3 237 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 C9IYK1 514 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 ZNF213O14771 459 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 SPTLC1O15269 473 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 MAFGO15525 162 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 MGEA5O60502 916 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 PPP1R11O60927 126 aaPredicted RBP2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 CLASP2O75122 1294 aaKnown RBP2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 RPS6KA5O75582 802 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 CXCL14O95715 111 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 EOMESO95936 686 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 ADRB1P08588 477 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 CFHP08603 1231 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 SP9P0CG40 484 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 FGFR1P11362 822 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 ZSCAN20P17040 1043 aaPredicted RBP2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 MX1P20591 662 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 ALDH7A1P49419 539 aaKnown RBP2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 STAT5BP51692 787 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 ATXN1P54253 815 aaKnown RBP2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 MFAP1P55081 439 aaKnown RBP2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 FAM189BP81408 668 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 LMNB2Q03252 620 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 TMEM62Q0P6H9 643 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 PLCB4Q15147 1175 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 TMEM266Q2M3C6 531 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 LETM2Q2VYF4 491 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 SPECC1Q5M775 1068 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 VARS2Q5ST30 1063 aaKnown RBP2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 IFIT1BQ5T764 474 aaKnown RBP2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 PCNX4Q63HM2 1172 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 PHLDB3Q6NSJ2 640 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 TMC5Q6UXY8 1006 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 GPR149Q86SP6 731 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 CABP7Q86V35 215 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 PPFIBP1Q86W92 1011 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 TICAM2Q86XR7 235 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 TBC1D10CQ8IV04 446 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 C1orf210Q8IVY1 113 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 VPS52Q8N1B4 723 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 LRRC43Q8N309 656 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 STAG2Q8N3U4 1231 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 C12orf76Q8N812 135 aaPredicted RBP2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 ENAHQ8N8S7 591 aaPredicted RBP2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 SUMF1Q8NBK3 374 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 SMARCC2Q8TAQ2 1214 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 RSPH1Q8WYR4 309 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 STAMQ92783 540 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 CUL5Q93034 780 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 NXPE3Q969Y0 559 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 GPRASP2Q96D09 838 aa2.72□□□□□ -1.97
RNU4-53P-201ENST00000410828 ZBTB10Q96DT7 871 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms