RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 RIT2Q99578 217 aa16.44■□□□□ 0.22
MCF2L-210ENST00000409954 RC3H2Q9HBD1 1191 aaKnown RBP16.44■□□□□ 0.22
MCF2L-210ENST00000409954 LRFN2Q9ULH4 789 aa16.44■□□□□ 0.22
MCF2L-210ENST00000409954 SAMM50Q9Y512 469 aa16.44■□□□□ 0.22
MCF2L-210ENST00000409954 PCDHB7Q9Y5E2 793 aa16.44■□□□□ 0.22
MCF2L-210ENST00000409954 NCOR1O75376 2440 aa16.44■□□□□ 0.22
MCF2L-210ENST00000409954 PTPRSQ13332 1948 aa16.43■□□□□ 0.22
MCF2L-210ENST00000409954 CPLX1O14810 134 aa16.43■□□□□ 0.22
MCF2L-210ENST00000409954 KCNA5P22460 613 aa16.43■□□□□ 0.22
MCF2L-210ENST00000409954 TMOD1P28289 359 aa16.43■□□□□ 0.22
MCF2L-210ENST00000409954 CRYBB1P53674 252 aaPredicted RBP16.43■□□□□ 0.22
MCF2L-210ENST00000409954 GALNT17Q6IS24 598 aa16.43■□□□□ 0.22
MCF2L-210ENST00000409954 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.43■□□□□ 0.22
MCF2L-210ENST00000409954 NEK9Q8TD19 979 aa16.43■□□□□ 0.22
MCF2L-210ENST00000409954 C1orf112Q9NSG2 853 aa16.43■□□□□ 0.22
MCF2L-210ENST00000409954 VPS54Q9P1Q0 977 aa16.43■□□□□ 0.22
MCF2L-210ENST00000409954 GABBR1Q9UBS5 961 aa16.43■□□□□ 0.22
MCF2L-210ENST00000409954 FAM50BQ9Y247 325 aa16.43■□□□□ 0.22
MCF2L-210ENST00000409954 DOCK5Q9H7D0 1870 aa16.42■□□□□ 0.22
MCF2L-210ENST00000409954 SPTBN5Q9NRC6 3674 aaKnown RBP16.42■□□□□ 0.22
MCF2L-210ENST00000409954 WDR64B1ANS9 1081 aa16.42■□□□□ 0.22
MCF2L-210ENST00000409954 ADAMTS3O15072 1205 aa16.42■□□□□ 0.22
MCF2L-210ENST00000409954 DEXIO95424 95 aa16.42■□□□□ 0.22
MCF2L-210ENST00000409954 LINC00271P0C7V0 271 aa16.42■□□□□ 0.22
MCF2L-210ENST00000409954 SFNP31947 248 aa16.42■□□□□ 0.22
MCF2L-210ENST00000409954 SARSP49591 514 aaKnown RBP16.42■□□□□ 0.22
MCF2L-210ENST00000409954 TOB2Q14106 344 aaPredicted RBP16.42■□□□□ 0.22
MCF2L-210ENST00000409954 COL19A1Q14993 1142 aa16.42■□□□□ 0.22
MCF2L-210ENST00000409954 TCEAL5Q5H9L2 206 aa16.42■□□□□ 0.22
MCF2L-210ENST00000409954 SLC24A5Q71RS6 500 aa16.42■□□□□ 0.22
MCF2L-210ENST00000409954 METTL13Q8N6R0 699 aa16.42■□□□□ 0.22
MCF2L-210ENST00000409954 CDHR5Q9HBB8 845 aa16.42■□□□□ 0.22
MCF2L-210ENST00000409954 NCOA5Q9HCD5 579 aaKnown RBP16.42■□□□□ 0.22
MCF2L-210ENST00000409954 DISC1Q9NRI5 854 aa16.42■□□□□ 0.22
MCF2L-210ENST00000409954 RGS18Q9NS28 235 aa16.42■□□□□ 0.22
MCF2L-210ENST00000409954 ST3GAL5Q9UNP4 418 aa16.42■□□□□ 0.22
MCF2L-210ENST00000409954 PLAGL2Q9UPG8 496 aa16.42■□□□□ 0.22
MCF2L-210ENST00000409954 GINS2Q9Y248 185 aa16.42■□□□□ 0.22
MCF2L-210ENST00000409954 NOC2LQ9Y3T9 749 aaKnown RBP16.42■□□□□ 0.22
MCF2L-210ENST00000409954 COL4A6Q14031 1691 aa16.42■□□□□ 0.22
MCF2L-210ENST00000409954 TRANK1O15050 2925 aa16.42■□□□□ 0.22
MCF2L-210ENST00000409954 MICAL3Q7RTP6 2002 aa16.41■□□□□ 0.22
MCF2L-210ENST00000409954 DENND3A2RUS2 1198 aa16.41■□□□□ 0.22
MCF2L-210ENST00000409954 GRXCR2A6NFK2 248 aa16.41■□□□□ 0.22
MCF2L-210ENST00000409954 ZBTB42B2RXF5 422 aa16.41■□□□□ 0.22
MCF2L-210ENST00000409954 GRM6O15303 877 aa16.41■□□□□ 0.22
MCF2L-210ENST00000409954 PTCRAQ6ISU1 281 aaPredicted RBP16.41■□□□□ 0.22
MCF2L-210ENST00000409954 FAM178BQ8IXR5 827 aa16.41■□□□□ 0.22
MCF2L-210ENST00000409954 RDM1Q8NG50 284 aa16.41■□□□□ 0.22
MCF2L-210ENST00000409954 RASGRP4Q8TDF6 673 aa16.41■□□□□ 0.22
MCF2L-210ENST00000409954 LINC01599Q8WXQ3 324 aa16.41■□□□□ 0.22
MCF2L-210ENST00000409954 PPP2R3CQ969Q6 453 aa16.41■□□□□ 0.22
MCF2L-210ENST00000409954 LENG9Q96B70 501 aa16.41■□□□□ 0.22
MCF2L-210ENST00000409954 UIMC1Q96RL1 719 aa16.41■□□□□ 0.22
MCF2L-210ENST00000409954 TMX1Q9H3N1 280 aa16.41■□□□□ 0.22
MCF2L-210ENST00000409954 ERVK-5Q9HDB9 667 aa16.41■□□□□ 0.22
MCF2L-210ENST00000409954 PCDHA4Q9UN74 947 aa16.41■□□□□ 0.22
MCF2L-210ENST00000409954 CYP3A7-CYP3A51PA0A087WV96 503 aa16.4■□□□□ 0.22
MCF2L-210ENST00000409954 MSH4O15457 936 aa16.4■□□□□ 0.22
MCF2L-210ENST00000409954 GAS7O60861 476 aa16.4■□□□□ 0.22
MCF2L-210ENST00000409954 C22orf31O95567 290 aa16.4■□□□□ 0.22
MCF2L-210ENST00000409954 NEFLP07196 543 aa16.4■□□□□ 0.22
MCF2L-210ENST00000409954 COL9A1P20849 921 aa16.4■□□□□ 0.22
MCF2L-210ENST00000409954 CYP3A7P24462 503 aa16.4■□□□□ 0.22
MCF2L-210ENST00000409954 JAK3P52333 1124 aa16.4■□□□□ 0.22
MCF2L-210ENST00000409954 FAM189BP81408 668 aa16.4■□□□□ 0.22
MCF2L-210ENST00000409954 CDC42EP1Q00587 391 aa16.4■□□□□ 0.22
MCF2L-210ENST00000409954 TMEM266Q2M3C6 531 aa16.4■□□□□ 0.22
MCF2L-210ENST00000409954 Q4G0T1 1027 aa16.4■□□□□ 0.22
MCF2L-210ENST00000409954 EFCAB12Q6NXP0 572 aa16.4■□□□□ 0.22
MCF2L-210ENST00000409954 BLIDQ8IZY5 108 aa16.4■□□□□ 0.22
MCF2L-210ENST00000409954 TBCKQ8TEA7 893 aa16.4■□□□□ 0.22
MCF2L-210ENST00000409954 SLC5A5Q92911 643 aa16.4■□□□□ 0.22
MCF2L-210ENST00000409954 ADAM2Q99965 735 aa16.4■□□□□ 0.22
MCF2L-210ENST00000409954 TEKT3Q9BXF9 490 aa16.4■□□□□ 0.22
MCF2L-210ENST00000409954 AAASQ9NRG9 546 aa16.4■□□□□ 0.22
MCF2L-210ENST00000409954 PDRG1Q9NUG6 133 aa16.4■□□□□ 0.22
MCF2L-210ENST00000409954 EDIL3O43854 480 aa16.39■□□□□ 0.21
MCF2L-210ENST00000409954 PPFIA3O75145 1194 aa16.39■□□□□ 0.21
MCF2L-210ENST00000409954 GPR32O75388 356 aa16.39■□□□□ 0.21
MCF2L-210ENST00000409954 MMP1P03956 469 aa16.39■□□□□ 0.21
MCF2L-210ENST00000409954 KIZQ2M2Z5 673 aa16.39■□□□□ 0.21
MCF2L-210ENST00000409954 CTC1Q2NKJ3 1217 aa16.39■□□□□ 0.21
MCF2L-210ENST00000409954 LRCH2Q5VUJ6 765 aa16.39■□□□□ 0.21
MCF2L-210ENST00000409954 MOXD1Q6UVY6 613 aa16.39■□□□□ 0.21
MCF2L-210ENST00000409954 EP400NLQ6ZTU2 488 aa16.39■□□□□ 0.21
MCF2L-210ENST00000409954 TRMT1LQ7Z2T5 733 aaKnown RBP16.39■□□□□ 0.21
MCF2L-210ENST00000409954 GJD3Q8N144 294 aa16.39■□□□□ 0.21
MCF2L-210ENST00000409954 SPPL3Q8TCT6 385 aa16.39■□□□□ 0.21
MCF2L-210ENST00000409954 MAP7D2Q96T17 732 aa16.39■□□□□ 0.21
MCF2L-210ENST00000409954 ELAC1Q9H777 363 aaKnown RBP16.39■□□□□ 0.21
MCF2L-210ENST00000409954 ALG13Q9NP73 1137 aaKnown RBP16.39■□□□□ 0.21
MCF2L-210ENST00000409954 MRPL42Q9Y6G3 142 aaKnown RBP16.39■□□□□ 0.21
MCF2L-210ENST00000409954 TTC3P53804 2025 aa16.38■□□□□ 0.21
MCF2L-210ENST00000409954 C9IYK1 514 aa16.38■□□□□ 0.21
MCF2L-210ENST00000409954 CDKL5O76039 1030 aa16.38■□□□□ 0.21
MCF2L-210ENST00000409954 ZSCAN20P17040 1043 aaPredicted RBP16.38■□□□□ 0.21
MCF2L-210ENST00000409954 XBP1P17861 261 aa16.38■□□□□ 0.21
MCF2L-210ENST00000409954 DAGLBQ8NCG7 672 aa16.38■□□□□ 0.21
MCF2L-210ENST00000409954 TMEM40Q8WWA1 233 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms