RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 MRPS6P82932 125 aaKnown RBP11.53□□□□□ -0.56
TSPAN9-202ENST00000407263 TMEM266Q2M3C6 531 aa11.53□□□□□ -0.56
TSPAN9-202ENST00000407263 ZNF484Q5JVG2 852 aa11.53□□□□□ -0.56
TSPAN9-202ENST00000407263 TMEM240Q5SV17 173 aa11.53□□□□□ -0.56
TSPAN9-202ENST00000407263 TAF2Q6P1X5 1199 aa11.53□□□□□ -0.56
TSPAN9-202ENST00000407263 FAM173BQ6P4H8 233 aa11.53□□□□□ -0.56
TSPAN9-202ENST00000407263 C16orf59Q7L2K0 433 aa11.53□□□□□ -0.56
TSPAN9-202ENST00000407263 BRAPQ7Z569 592 aa11.53□□□□□ -0.56
TSPAN9-202ENST00000407263 METTL13Q8N6R0 699 aa11.53□□□□□ -0.56
TSPAN9-202ENST00000407263 TNPO1Q92973 898 aaKnown RBP11.53□□□□□ -0.56
TSPAN9-202ENST00000407263 VWCEQ96DN2 955 aa11.53□□□□□ -0.56
TSPAN9-202ENST00000407263 EIF2AK1Q9BQI3 630 aaKnown RBP11.53□□□□□ -0.56
TSPAN9-202ENST00000407263 OSBPL7Q9BZF2 842 aa11.53□□□□□ -0.56
TSPAN9-202ENST00000407263 CEP131Q9UPN4 1083 aa11.53□□□□□ -0.56
TSPAN9-202ENST00000407263 CDY2AQ9Y6F7 541 aa11.53□□□□□ -0.56
TSPAN9-202ENST00000407263 RANBP2P49792 3224 aaKnown RBP11.52□□□□□ -0.57
TSPAN9-202ENST00000407263 A0A1W2PPC1 479 aa11.52□□□□□ -0.57
TSPAN9-202ENST00000407263 DDX11L8A8MPP1 907 aa11.52□□□□□ -0.57
TSPAN9-202ENST00000407263 PP2D1A8MPX8 630 aa11.52□□□□□ -0.57
TSPAN9-202ENST00000407263 SOX1O00570 391 aaPredicted RBP11.52□□□□□ -0.57
TSPAN9-202ENST00000407263 STBD1O95210 358 aa11.52□□□□□ -0.57
TSPAN9-202ENST00000407263 P4HBP07237 508 aaKnown RBP11.52□□□□□ -0.57
TSPAN9-202ENST00000407263 GHRP10912 638 aa11.52□□□□□ -0.57
TSPAN9-202ENST00000407263 RFC2P35250 354 aa11.52□□□□□ -0.57
TSPAN9-202ENST00000407263 MGAT3Q09327 533 aa11.52□□□□□ -0.57
TSPAN9-202ENST00000407263 TBC1D8BQ0IIM8 1120 aa11.52□□□□□ -0.57
TSPAN9-202ENST00000407263 TCTN1Q2MV58 587 aa11.52□□□□□ -0.57
TSPAN9-202ENST00000407263 XKR3Q5GH77 459 aa11.52□□□□□ -0.57
TSPAN9-202ENST00000407263 ANO5Q75V66 913 aa11.52□□□□□ -0.57
TSPAN9-202ENST00000407263 RSPH3Q86UC2 560 aa11.52□□□□□ -0.57
TSPAN9-202ENST00000407263 TPH2Q8IWU9 490 aa11.52□□□□□ -0.57
TSPAN9-202ENST00000407263 C4orf32Q8N8J7 132 aa11.52□□□□□ -0.57
TSPAN9-202ENST00000407263 NEK9Q8TD19 979 aa11.52□□□□□ -0.57
TSPAN9-202ENST00000407263 ZNF668Q96K58 619 aaPredicted RBP11.52□□□□□ -0.57
TSPAN9-202ENST00000407263 CCDC43Q96MW1 224 aaKnown RBP11.52□□□□□ -0.57
TSPAN9-202ENST00000407263 NRBP2Q9NSY0 501 aa11.52□□□□□ -0.57
TSPAN9-202ENST00000407263 CXXC1Q9P0U4 656 aaPredicted RBP11.52□□□□□ -0.57
TSPAN9-202ENST00000407263 GINS2Q9Y248 185 aa11.52□□□□□ -0.57
TSPAN9-202ENST00000407263 PCDHA2Q9Y5H9 948 aa11.52□□□□□ -0.57
TSPAN9-202ENST00000407263 TRPV2Q9Y5S1 764 aa11.52□□□□□ -0.57
TSPAN9-202ENST00000407263 RALGAPA2Q2PPJ7 1873 aa11.51□□□□□ -0.57
TSPAN9-202ENST00000407263 A0A087WWV3 80 aa11.51□□□□□ -0.57
TSPAN9-202ENST00000407263 M0QZ92 97 aa11.51□□□□□ -0.57
TSPAN9-202ENST00000407263 ZBTB39O15060 712 aa11.51□□□□□ -0.57
TSPAN9-202ENST00000407263 DKC1O60832 514 aaKnown RBP eCLIP11.51□□□□□ -0.57
TSPAN9-202ENST00000407263 CAND2O75155 1236 aa11.51□□□□□ -0.57
TSPAN9-202ENST00000407263 MED24O75448 989 aa11.51□□□□□ -0.57
TSPAN9-202ENST00000407263 FGBP02675 491 aa11.51□□□□□ -0.57
TSPAN9-202ENST00000407263 CHRNA1P02708 482 aa11.51□□□□□ -0.57
TSPAN9-202ENST00000407263 VTNP04004 478 aa11.51□□□□□ -0.57
TSPAN9-202ENST00000407263 PFKMP08237 780 aa11.51□□□□□ -0.57
TSPAN9-202ENST00000407263 YWHABP31946 246 aaKnown RBP11.51□□□□□ -0.57
TSPAN9-202ENST00000407263 NPEPPSP55786 919 aa11.51□□□□□ -0.57
TSPAN9-202ENST00000407263 ATP2C1P98194 919 aaPredicted RBP11.51□□□□□ -0.57
TSPAN9-202ENST00000407263 PKP1Q13835 747 aa11.51□□□□□ -0.57
TSPAN9-202ENST00000407263 GPNMBQ14956 572 aa11.51□□□□□ -0.57
TSPAN9-202ENST00000407263 POTEGQ6S5H5 508 aa11.51□□□□□ -0.57
TSPAN9-202ENST00000407263 RPUSD2Q8IZ73 545 aaKnown RBP11.51□□□□□ -0.57
TSPAN9-202ENST00000407263 ZNF579Q8NAF0 562 aaKnown RBP11.51□□□□□ -0.57
TSPAN9-202ENST00000407263 SNX29Q8TEQ0 813 aa11.51□□□□□ -0.57
TSPAN9-202ENST00000407263 LRCH3Q96II8 777 aa11.51□□□□□ -0.57
TSPAN9-202ENST00000407263 PKNOX2Q96KN3 472 aa11.51□□□□□ -0.57
TSPAN9-202ENST00000407263 SUGCTQ9HAC7 445 aa11.51□□□□□ -0.57
TSPAN9-202ENST00000407263 AKT3Q9Y243 479 aa11.51□□□□□ -0.57
TSPAN9-202ENST00000407263 SMIM35A0A1B0GVV1 85 aa11.5□□□□□ -0.57
TSPAN9-202ENST00000407263 VWA3AA6NCI4 1184 aa11.5□□□□□ -0.57
TSPAN9-202ENST00000407263 ACTN1P12814 892 aa11.5□□□□□ -0.57
TSPAN9-202ENST00000407263 CCT6AP40227 531 aaKnown RBP11.5□□□□□ -0.57
TSPAN9-202ENST00000407263 FXR2P51116 673 aaKnown RBP eCLIP11.5□□□□□ -0.57
TSPAN9-202ENST00000407263 POLGP54098 1239 aaPredicted RBP11.5□□□□□ -0.57
TSPAN9-202ENST00000407263 CEBPZQ03701 1054 aaKnown RBP11.5□□□□□ -0.57
TSPAN9-202ENST00000407263 PDE4CQ08493 712 aa11.5□□□□□ -0.57
TSPAN9-202ENST00000407263 DRP2Q13474 957 aa11.5□□□□□ -0.57
TSPAN9-202ENST00000407263 SF3A1Q15459 793 aaKnown RBP11.5□□□□□ -0.57
TSPAN9-202ENST00000407263 TARBP2Q15633 366 aaKnown RBP11.5□□□□□ -0.57
TSPAN9-202ENST00000407263 IL17AQ16552 155 aa11.5□□□□□ -0.57
TSPAN9-202ENST00000407263 FOXD4L6Q3SYB3 417 aaPredicted RBP11.5□□□□□ -0.57
TSPAN9-202ENST00000407263 XKR9Q5GH70 373 aa11.5□□□□□ -0.57
TSPAN9-202ENST00000407263 HAUS3Q68CZ6 603 aa11.5□□□□□ -0.57
TSPAN9-202ENST00000407263 FAM109BQ6ICB4 259 aaPredicted RBP11.5□□□□□ -0.57
TSPAN9-202ENST00000407263 EFCAB12Q6NXP0 572 aa11.5□□□□□ -0.57
TSPAN9-202ENST00000407263 CNKSR3Q6P9H4 555 aa11.5□□□□□ -0.57
TSPAN9-202ENST00000407263 FOXD4L3Q6VB84 417 aaPredicted RBP11.5□□□□□ -0.57
TSPAN9-202ENST00000407263 C4orf19Q8IY42 314 aa11.5□□□□□ -0.57
TSPAN9-202ENST00000407263 ERMNQ8TAM6 284 aa11.5□□□□□ -0.57
TSPAN9-202ENST00000407263 PIGOQ8TEQ8 1089 aa11.5□□□□□ -0.57
TSPAN9-202ENST00000407263 CEP170P1Q96L14 293 aa11.5□□□□□ -0.57
TSPAN9-202ENST00000407263 SCLT1Q96NL6 688 aa11.5□□□□□ -0.57
TSPAN9-202ENST00000407263 MAP7D2Q96T17 732 aa11.5□□□□□ -0.57
TSPAN9-202ENST00000407263 OSMRQ99650 979 aa11.5□□□□□ -0.57
TSPAN9-202ENST00000407263 ZSWIM4Q9H7M6 989 aa11.5□□□□□ -0.57
TSPAN9-202ENST00000407263 CYP26B1Q9NR63 512 aa11.5□□□□□ -0.57
TSPAN9-202ENST00000407263 LRWD1Q9UFC0 647 aa11.5□□□□□ -0.57
TSPAN9-202ENST00000407263 CLIC4Q9Y696 253 aa11.5□□□□□ -0.57
TSPAN9-202ENST00000407263 FNDC1Q4ZHG4 1894 aaPredicted RBP11.5□□□□□ -0.57
TSPAN9-202ENST00000407263 ATG2AQ2TAZ0 1938 aa11.49□□□□□ -0.57
TSPAN9-202ENST00000407263 GRXCR1A8MXD5 290 aa11.49□□□□□ -0.57
TSPAN9-202ENST00000407263 LAD1O00515 517 aa11.49□□□□□ -0.57
TSPAN9-202ENST00000407263 USO1O60763 962 aaKnown RBP11.49□□□□□ -0.57
TSPAN9-202ENST00000407263 SLITRK3O94933 977 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms