RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 PACSIN1Q9BY11 444 aa16.4■□□□□ 0.22
ATG4B-206ENST00000405546 TRIM31Q9BZY9 425 aa16.4■□□□□ 0.22
ATG4B-206ENST00000405546 CLRN2A0PK11 232 aa16.4■□□□□ 0.22
ATG4B-206ENST00000405546 DCDC2CA8MYV0 355 aa16.4■□□□□ 0.22
ATG4B-206ENST00000405546 DDX39AO00148 427 aaKnown RBP16.4■□□□□ 0.22
ATG4B-206ENST00000405546 ALDH1B1P30837 517 aa16.4■□□□□ 0.22
ATG4B-206ENST00000405546 SEMA3FQ13275 785 aa16.4■□□□□ 0.22
ATG4B-206ENST00000405546 TACO1Q9BSH4 297 aaKnown RBP16.4■□□□□ 0.22
ATG4B-206ENST00000405546 VCPKMTQ9H867 229 aa16.4■□□□□ 0.22
ATG4B-206ENST00000405546 TCP1P17987 556 aaKnown RBP16.39■□□□□ 0.21
ATG4B-206ENST00000405546 MDH1P40925 334 aaKnown RBP16.39■□□□□ 0.21
ATG4B-206ENST00000405546 FIGNQ5HY92 759 aa16.39■□□□□ 0.21
ATG4B-206ENST00000405546 PARP9Q8IXQ6 854 aa16.39■□□□□ 0.21
ATG4B-206ENST00000405546 MYCT1Q8N699 235 aa16.39■□□□□ 0.21
ATG4B-206ENST00000405546 OSBPL7Q9BZF2 842 aa16.39■□□□□ 0.21
ATG4B-206ENST00000405546 HDAC9Q9UKV0 1011 aa16.39■□□□□ 0.21
ATG4B-206ENST00000405546 L3MBTL1Q9Y468 752 aa16.39■□□□□ 0.21
ATG4B-206ENST00000405546 SCN7AQ01118 1682 aa16.39■□□□□ 0.21
ATG4B-206ENST00000405546 A0A087X0T9 212 aa16.39■□□□□ 0.21
ATG4B-206ENST00000405546 FAM228BP0C875 321 aa16.39■□□□□ 0.21
ATG4B-206ENST00000405546 KLRC1P26715 233 aa16.39■□□□□ 0.21
ATG4B-206ENST00000405546 ORC2Q13416 577 aaPredicted RBP16.39■□□□□ 0.21
ATG4B-206ENST00000405546 TMEM119Q4V9L6 283 aa16.39■□□□□ 0.21
ATG4B-206ENST00000405546 KSR1Q8IVT5 923 aa16.39■□□□□ 0.21
ATG4B-206ENST00000405546 IKZF4Q9H2S9 585 aa16.39■□□□□ 0.21
ATG4B-206ENST00000405546 DHX36Q9H2U1 1008 aaKnown RBP16.39■□□□□ 0.21
ATG4B-206ENST00000405546 LRRC4CQ9HCJ2 640 aa16.39■□□□□ 0.21
ATG4B-206ENST00000405546 BCS1LQ9Y276 419 aa16.39■□□□□ 0.21
ATG4B-206ENST00000405546 AHDC1Q5TGY3 1603 aaPredicted RBP16.39■□□□□ 0.21
ATG4B-206ENST00000405546 CCDC189A1A4V9 331 aa16.39■□□□□ 0.21
ATG4B-206ENST00000405546 CLTAP09496 248 aa16.39■□□□□ 0.21
ATG4B-206ENST00000405546 MYBP10242 640 aa16.39■□□□□ 0.21
ATG4B-206ENST00000405546 HOXA10P31260 410 aaPredicted RBP16.39■□□□□ 0.21
ATG4B-206ENST00000405546 PPP1R7Q15435 360 aa16.39■□□□□ 0.21
ATG4B-206ENST00000405546 CFAP221Q4G0U5 840 aa16.39■□□□□ 0.21
ATG4B-206ENST00000405546 UBLCP1Q8WVY7 318 aaPredicted RBP16.39■□□□□ 0.21
ATG4B-206ENST00000405546 CASKIN2Q8WXE0 1202 aa16.39■□□□□ 0.21
ATG4B-206ENST00000405546 BAP1Q92560 729 aa16.39■□□□□ 0.21
ATG4B-206ENST00000405546 SNHG28P0DPA3 235 aa16.38■□□□□ 0.21
ATG4B-206ENST00000405546 XRCC5P13010 732 aaKnown RBP16.38■□□□□ 0.21
ATG4B-206ENST00000405546 RBM26Q5T8P6 1007 aaKnown RBP16.38■□□□□ 0.21
ATG4B-206ENST00000405546 HIBCHQ6NVY1 386 aaPredicted RBP16.38■□□□□ 0.21
ATG4B-206ENST00000405546 UHMK1Q8TAS1 419 aaKnown RBP16.38■□□□□ 0.21
ATG4B-206ENST00000405546 CSRNP1Q96S65 589 aa16.38■□□□□ 0.21
ATG4B-206ENST00000405546 REEP2Q9BRK0 252 aa16.38■□□□□ 0.21
ATG4B-206ENST00000405546 KCNK3O14649 394 aa16.38■□□□□ 0.21
ATG4B-206ENST00000405546 SERPING1P05155 500 aa16.38■□□□□ 0.21
ATG4B-206ENST00000405546 NPR1P16066 1061 aa16.38■□□□□ 0.21
ATG4B-206ENST00000405546 SLFN12Q8IYM2 578 aa16.38■□□□□ 0.21
ATG4B-206ENST00000405546 CEP72Q9P209 647 aa16.38■□□□□ 0.21
ATG4B-206ENST00000405546 ZBTB21Q9ULJ3 1066 aa16.38■□□□□ 0.21
ATG4B-206ENST00000405546 SCAF8Q9UPN6 1271 aaKnown RBP16.38■□□□□ 0.21
ATG4B-206ENST00000405546 GOLGA6L10A6NI86 522 aa16.37■□□□□ 0.21
ATG4B-206ENST00000405546 ZBTB39O15060 712 aa16.37■□□□□ 0.21
ATG4B-206ENST00000405546 FAM13AO94988 1023 aa16.37■□□□□ 0.21
ATG4B-206ENST00000405546 NDUFB10O96000 172 aa16.37■□□□□ 0.21
ATG4B-206ENST00000405546 KCNA1Q09470 495 aa16.37■□□□□ 0.21
ATG4B-206ENST00000405546 BIRC2Q13490 618 aa16.37■□□□□ 0.21
ATG4B-206ENST00000405546 EXOC3L4Q17RC7 722 aa16.37■□□□□ 0.21
ATG4B-206ENST00000405546 TBC1D10BQ4KMP7 808 aaPredicted RBP16.37■□□□□ 0.21
ATG4B-206ENST00000405546 PROM2Q8N271 834 aa16.37■□□□□ 0.21
ATG4B-206ENST00000405546 MMGT1Q8N4V1 131 aa16.37■□□□□ 0.21
ATG4B-206ENST00000405546 AP1M1Q9BXS5 423 aa16.37■□□□□ 0.21
ATG4B-206ENST00000405546 DNAJC18Q9H819 358 aa16.37■□□□□ 0.21
ATG4B-206ENST00000405546 SKOR1P84550 965 aa16.37■□□□□ 0.21
ATG4B-206ENST00000405546 MYO1EQ12965 1108 aa16.37■□□□□ 0.21
ATG4B-206ENST00000405546 PRPF4BQ13523 1007 aaKnown RBP16.37■□□□□ 0.21
ATG4B-206ENST00000405546 NBPF9Q3BBW0 867 aa16.37■□□□□ 0.21
ATG4B-206ENST00000405546 PREPLQ4J6C6 727 aaPredicted RBP16.37■□□□□ 0.21
ATG4B-206ENST00000405546 FUKQ8N0W3 1084 aa16.37■□□□□ 0.21
ATG4B-206ENST00000405546 NLGN1Q8N2Q7 840 aa16.37■□□□□ 0.21
ATG4B-206ENST00000405546 TRPC5Q9UL62 973 aaPredicted RBP16.37■□□□□ 0.21
ATG4B-206ENST00000405546 FAM86B1E9PN63 330 aa16.37■□□□□ 0.21
ATG4B-206ENST00000405546 CEP104O60308 925 aa16.37■□□□□ 0.21
ATG4B-206ENST00000405546 FAM86B2P0C5J1 330 aa16.37■□□□□ 0.21
ATG4B-206ENST00000405546 EZRP15311 586 aaKnown RBP16.37■□□□□ 0.21
ATG4B-206ENST00000405546 EMBQ6PCB8 327 aa16.37■□□□□ 0.21
ATG4B-206ENST00000405546 GJB7Q6PEY0 223 aa16.37■□□□□ 0.21
ATG4B-206ENST00000405546 CPLX4Q7Z7G2 160 aa16.37■□□□□ 0.21
ATG4B-206ENST00000405546 IQCDQ96DY2 449 aa16.37■□□□□ 0.21
ATG4B-206ENST00000405546 NOVA2Q9UNW9 492 aaKnown RBP16.37■□□□□ 0.21
ATG4B-206ENST00000405546 TLR2O60603 784 aa16.36■□□□□ 0.21
ATG4B-206ENST00000405546 BMP3P12645 472 aa16.36■□□□□ 0.21
ATG4B-206ENST00000405546 CHRNA5P30532 468 aa16.36■□□□□ 0.21
ATG4B-206ENST00000405546 CASP4P49662 377 aa16.36■□□□□ 0.21
ATG4B-206ENST00000405546 CYP2J2P51589 502 aa16.36■□□□□ 0.21
ATG4B-206ENST00000405546 AOC3Q16853 763 aa16.36■□□□□ 0.21
ATG4B-206ENST00000405546 ALS2CLQ60I27 953 aa16.36■□□□□ 0.21
ATG4B-206ENST00000405546 PPP1R18Q6NYC8 613 aa16.36■□□□□ 0.21
ATG4B-206ENST00000405546 IFT20Q8IY31 132 aa16.36■□□□□ 0.21
ATG4B-206ENST00000405546 TLR10Q9BXR5 811 aa16.36■□□□□ 0.21
ATG4B-206ENST00000405546 ENO4A6NNW6 628 aa16.36■□□□□ 0.21
ATG4B-206ENST00000405546 GNA14O95837 355 aa16.36■□□□□ 0.21
ATG4B-206ENST00000405546 APBA3O96018 575 aa16.36■□□□□ 0.21
ATG4B-206ENST00000405546 SMTNP53814 917 aa16.36■□□□□ 0.21
ATG4B-206ENST00000405546 ARSHQ5FYA8 562 aa16.36■□□□□ 0.21
ATG4B-206ENST00000405546 SYDE2Q5VT97 1194 aa16.36■□□□□ 0.21
ATG4B-206ENST00000405546 KRT27Q7Z3Y8 459 aa16.36■□□□□ 0.21
ATG4B-206ENST00000405546 ADAT2Q7Z6V5 191 aaKnown RBP16.36■□□□□ 0.21
ATG4B-206ENST00000405546 PIK3R5Q8WYR1 880 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms