RNA–Protein interactions for RNA: ENST00000402326.1

CBX3P9-201, Transcript of chromobox 3 pseudogene 9, humanhuman

BASIC

Gene CBX3P9, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P9-201ENST00000402326 HIPK4Q8NE63 616 aa3.27□□□□□ -1.89
CBX3P9-201ENST00000402326 IGDCC4Q8TDY8 1250 aa3.27□□□□□ -1.89
CBX3P9-201ENST00000402326 ASB15Q8WXK1 588 aa3.27□□□□□ -1.89
CBX3P9-201ENST00000402326 SLC5A5Q92911 643 aa3.27□□□□□ -1.89
CBX3P9-201ENST00000402326 HOOK2Q96ED9 719 aa3.27□□□□□ -1.89
CBX3P9-201ENST00000402326 GBP4Q96PP9 640 aa3.27□□□□□ -1.89
CBX3P9-201ENST00000402326 ELF4Q99607 663 aaPredicted RBP3.27□□□□□ -1.89
CBX3P9-201ENST00000402326 GORASP1Q9BQQ3 440 aa3.27□□□□□ -1.89
CBX3P9-201ENST00000402326 C11orf84Q9BUA3 381 aaPredicted RBP3.27□□□□□ -1.89
CBX3P9-201ENST00000402326 DLL4Q9NR61 685 aa3.27□□□□□ -1.89
CBX3P9-201ENST00000402326 TOMM22Q9NS69 142 aa3.27□□□□□ -1.89
CBX3P9-201ENST00000402326 SLC52A1Q9NWF4 448 aa3.27□□□□□ -1.89
CBX3P9-201ENST00000402326 ZIM2Q9NZV7 527 aa3.27□□□□□ -1.89
CBX3P9-201ENST00000402326 GABBR1Q9UBS5 961 aa3.27□□□□□ -1.89
CBX3P9-201ENST00000402326 CNOT6Q9ULM6 557 aaKnown RBP3.27□□□□□ -1.89
CBX3P9-201ENST00000402326 SMG5Q9UPR3 1016 aaKnown RBP3.27□□□□□ -1.89
CBX3P9-201ENST00000402326 ASB1Q9Y576 335 aa3.27□□□□□ -1.89
CBX3P9-201ENST00000402326 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 RASSF10A6NK89 507 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 DBX1A6NMT0 343 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 ZNF839A8K0R7 811 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 GOLGA6L22H0YM25 854 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 RFXAPO00287 272 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 TSPAN6O43657 245 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 ULK1O75385 1050 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 CYP7B1O75881 506 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 TSPAN15O95858 294 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 SCGB1D2O95969 90 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 KRT1P04264 644 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 MMEP08473 750 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 C1QTNF9P0C862 333 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 PTGS1P23219 599 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 PTX3P26022 381 aaPredicted RBP3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 AOAHP28039 575 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 LSP1P33241 339 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 RAP1GAPP47736 663 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 ITGA1P56199 1179 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 ERVK-21P61565 698 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 SMAD3P84022 425 aaKnown RBP3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 ADCY1Q08828 1119 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 FAPQ12884 760 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 LRRC32Q14392 662 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 PPP2R5AQ15172 486 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 PCBP2Q15366 365 aaKnown RBP eCLIP3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 EPHA7Q15375 998 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 SMAD2Q15796 467 aaKnown RBP3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 DDB1Q16531 1140 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 PTPN21Q16825 1174 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 ZNF385BQ569K4 471 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 GPR158Q5T848 1215 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 CCDC181Q5TID7 509 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 CNKSR3Q6P9H4 555 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 LIPIQ6XZB0 460 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 C14orf80Q86SX3 495 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 STK32CQ86UX6 486 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 FAM129CQ86XR2 697 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 LINC00482Q8N8I6 264 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 KYQ8NBH2 561 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 ERCC4Q92889 916 aaPredicted RBP3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 E2F7Q96AV8 911 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 ZBTB8AQ96BR9 441 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 AHCYL2Q96HN2 611 aaKnown RBP3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 C16orf92Q96LL3 132 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 PWWP2AQ96N64 755 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 CLIC6Q96NY7 704 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 NOX5Q96PH1 765 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 WRNIP1Q96S55 665 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 RTFDC1Q9BY42 306 aaPredicted RBP3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 SLC39A2Q9NP94 309 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 CD320Q9NPF0 282 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 C14orf119Q9NWQ9 140 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 UCKL1Q9NWZ5 548 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 BTBD7Q9P203 1132 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 ARHGAP20Q9P2F6 1191 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 RBPJLQ9UBG7 517 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 NOB1Q9ULX3 412 aaKnown RBP3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 WASF3Q9UPY6 502 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 KCTD3Q9Y597 815 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 PMF1-BGLAPU3KQ54 211 aa3.26□□□□□ -1.89
CBX3P9-201ENST00000402326 PRAMEF22A3QJZ6 481 aa3.25□□□□□ -1.89
CBX3P9-201ENST00000402326 PRPF3O43395 683 aaKnown RBP3.25□□□□□ -1.89
CBX3P9-201ENST00000402326 FBXO21O94952 628 aa3.25□□□□□ -1.89
CBX3P9-201ENST00000402326 PI3P19957 117 aa3.25□□□□□ -1.89
CBX3P9-201ENST00000402326 CD40P25942 277 aa3.25□□□□□ -1.89
CBX3P9-201ENST00000402326 SCAND1P57086 179 aa3.25□□□□□ -1.89
CBX3P9-201ENST00000402326 SESN3P58005 492 aa3.25□□□□□ -1.89
CBX3P9-201ENST00000402326 PHC1P78364 1004 aa3.25□□□□□ -1.89
CBX3P9-201ENST00000402326 ADAM9Q13443 819 aa3.25□□□□□ -1.89
CBX3P9-201ENST00000402326 SMAD4Q13485 552 aaKnown RBP3.25□□□□□ -1.89
CBX3P9-201ENST00000402326 SSPNQ14714 243 aa3.25□□□□□ -1.89
CBX3P9-201ENST00000402326 TERF2Q15554 542 aa3.25□□□□□ -1.89
CBX3P9-201ENST00000402326 KCNA10Q16322 511 aa3.25□□□□□ -1.89
CBX3P9-201ENST00000402326 SKIDA1Q1XH10 827 aa3.25□□□□□ -1.89
CBX3P9-201ENST00000402326 INAVAQ3KP66 663 aa3.25□□□□□ -1.89
CBX3P9-201ENST00000402326 PRAMEF18Q5VWM3 479 aa3.25□□□□□ -1.89
CBX3P9-201ENST00000402326 DPP8Q6V1X1 898 aaPredicted RBP3.25□□□□□ -1.89
CBX3P9-201ENST00000402326 CHPFQ8IZ52 775 aa3.25□□□□□ -1.89
CBX3P9-201ENST00000402326 DTX3Q8N9I9 347 aa3.25□□□□□ -1.89
CBX3P9-201ENST00000402326 ZNF610Q8N9Z0 462 aa3.25□□□□□ -1.89
CBX3P9-201ENST00000402326 WDR48Q8TAF3 677 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms