RNA–Protein interactions for RNA: ENST00000400370.8

ATP7B-204, Transcript of ATPase copper transporting beta, humanhuman

TSL 1 (best) BASIC

Gene ATP7B, Length 3,252 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-204ENST00000400370 OTOFQ9HC10 1997 aa11.29□□□□□ -0.6
ATP7B-204ENST00000400370 KRT18P05783 430 aaKnown RBP11.29□□□□□ -0.6
ATP7B-204ENST00000400370 GCFC2P16383 781 aaKnown RBP11.29□□□□□ -0.6
ATP7B-204ENST00000400370 NAP1L1P55209 391 aaKnown RBP11.29□□□□□ -0.6
ATP7B-204ENST00000400370 IRX3P78415 501 aaPredicted RBP11.29□□□□□ -0.6
ATP7B-204ENST00000400370 PSMD2Q13200 908 aa11.29□□□□□ -0.6
ATP7B-204ENST00000400370 TMEM179Q6ZVK1 233 aa11.29□□□□□ -0.6
ATP7B-204ENST00000400370 EPM2AIP1Q7L775 607 aaPredicted RBP11.29□□□□□ -0.6
ATP7B-204ENST00000400370 SMC1BQ8NDV3 1235 aa11.29□□□□□ -0.6
ATP7B-204ENST00000400370 HHIPL1Q96JK4 782 aa11.29□□□□□ -0.6
ATP7B-204ENST00000400370 CCDC17Q96LX7 622 aa11.29□□□□□ -0.6
ATP7B-204ENST00000400370 HPCAL4Q9UM19 191 aa11.29□□□□□ -0.6
ATP7B-204ENST00000400370 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.29□□□□□ -0.6
ATP7B-204ENST00000400370 TISP43B9A030 160 aa11.29□□□□□ -0.6
ATP7B-204ENST00000400370 PALMO75781 387 aa11.29□□□□□ -0.6
ATP7B-204ENST00000400370 IPO7O95373 1038 aaKnown RBP11.29□□□□□ -0.6
ATP7B-204ENST00000400370 CFBP00751 764 aa11.29□□□□□ -0.6
ATP7B-204ENST00000400370 SREBF1P36956 1147 aa11.29□□□□□ -0.6
ATP7B-204ENST00000400370 PTK2Q05397 1052 aa11.29□□□□□ -0.6
ATP7B-204ENST00000400370 SUPT20HL1Q3ZLR7 823 aa11.29□□□□□ -0.6
ATP7B-204ENST00000400370 TBC1D10BQ4KMP7 808 aaPredicted RBP11.29□□□□□ -0.6
ATP7B-204ENST00000400370 SPATA4Q8NEY3 305 aa11.29□□□□□ -0.6
ATP7B-204ENST00000400370 OLIG1Q8TAK6 271 aa11.29□□□□□ -0.6
ATP7B-204ENST00000400370 RABEP2Q9H5N1 569 aa11.29□□□□□ -0.6
ATP7B-204ENST00000400370 RRAGCQ9HB90 399 aa11.29□□□□□ -0.6
ATP7B-204ENST00000400370 GPBP1L1Q9HC44 474 aaPredicted RBP11.29□□□□□ -0.6
ATP7B-204ENST00000400370 KIF3CO14782 793 aa11.28□□□□□ -0.6
ATP7B-204ENST00000400370 TOMM70O94826 608 aa11.28□□□□□ -0.6
ATP7B-204ENST00000400370 BMP3P12645 472 aa11.28□□□□□ -0.6
ATP7B-204ENST00000400370 DCAF17Q5H9S7 520 aaPredicted RBP11.28□□□□□ -0.6
ATP7B-204ENST00000400370 ZNF571Q7Z3V5 609 aaPredicted RBP11.28□□□□□ -0.6
ATP7B-204ENST00000400370 TRPM4Q8TD43 1214 aa11.28□□□□□ -0.6
ATP7B-204ENST00000400370 TSG101Q99816 390 aa11.28□□□□□ -0.6
ATP7B-204ENST00000400370 EIF2AK1Q9BQI3 630 aaKnown RBP11.28□□□□□ -0.6
ATP7B-204ENST00000400370 NT5C3AQ9H0P0 336 aa11.28□□□□□ -0.6
ATP7B-204ENST00000400370 PKD2L1Q9P0L9 805 aa11.28□□□□□ -0.6
ATP7B-204ENST00000400370 JRKLQ9Y4A0 524 aa11.28□□□□□ -0.6
ATP7B-204ENST00000400370 PHIPQ8WWQ0 1821 aa11.28□□□□□ -0.6
ATP7B-204ENST00000400370 PASKQ96RG2 1323 aa11.28□□□□□ -0.6
ATP7B-204ENST00000400370 TGFB1I1O43294 461 aa11.28□□□□□ -0.6
ATP7B-204ENST00000400370 RPA1P27694 616 aa11.28□□□□□ -0.6
ATP7B-204ENST00000400370 ZC3H3Q8IXZ2 948 aaKnown RBP11.28□□□□□ -0.6
ATP7B-204ENST00000400370 SYT2Q8N9I0 419 aaPredicted RBP11.28□□□□□ -0.6
ATP7B-204ENST00000400370 ZSWIM2Q8NEG5 633 aa11.28□□□□□ -0.6
ATP7B-204ENST00000400370 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.28□□□□□ -0.6
ATP7B-204ENST00000400370 SELENOOQ9BVL4 669 aa11.28□□□□□ -0.6
ATP7B-204ENST00000400370 TMEM39BQ9GZU3 492 aa11.28□□□□□ -0.6
ATP7B-204ENST00000400370 CEP72Q9P209 647 aa11.28□□□□□ -0.6
ATP7B-204ENST00000400370 BRCA2P51587 3418 aa11.28□□□□□ -0.6
ATP7B-204ENST00000400370 TMEM150BA6NC51 233 aa11.27□□□□□ -0.6
ATP7B-204ENST00000400370 YY1P25490 414 aa11.27□□□□□ -0.6
ATP7B-204ENST00000400370 GGCXP38435 758 aa11.27□□□□□ -0.6
ATP7B-204ENST00000400370 Q4G0T1 1027 aa11.27□□□□□ -0.6
ATP7B-204ENST00000400370 HAUS3Q68CZ6 603 aa11.27□□□□□ -0.6
ATP7B-204ENST00000400370 CCNI2Q6ZMN8 369 aaPredicted RBP11.27□□□□□ -0.6
ATP7B-204ENST00000400370 IRF2BP2Q7Z5L9 587 aa11.27□□□□□ -0.6
ATP7B-204ENST00000400370 CCDC65Q8IXS2 484 aa11.27□□□□□ -0.6
ATP7B-204ENST00000400370 TSEN2Q8NCE0 465 aaKnown RBP11.27□□□□□ -0.6
ATP7B-204ENST00000400370 GMCL1P1Q8NEA9 526 aa11.27□□□□□ -0.6
ATP7B-204ENST00000400370 TEPSINQ96N21 525 aa11.27□□□□□ -0.6
ATP7B-204ENST00000400370 SIX2Q9NPC8 291 aa11.27□□□□□ -0.6
ATP7B-204ENST00000400370 ZNF112Q9UJU3 913 aa11.27□□□□□ -0.6
ATP7B-204ENST00000400370 DNAH12Q6ZR08 3092 aa11.27□□□□□ -0.6
ATP7B-204ENST00000400370 ABCB11O95342 1321 aa11.27□□□□□ -0.6
ATP7B-204ENST00000400370 KDM3AQ9Y4C1 1321 aa11.27□□□□□ -0.6
ATP7B-204ENST00000400370 ANO9A1A5B4 782 aa11.27□□□□□ -0.61
ATP7B-204ENST00000400370 SPDYE3A6NKU9 549 aa11.27□□□□□ -0.61
ATP7B-204ENST00000400370 ANKRD65E5RJM6 399 aa11.27□□□□□ -0.61
ATP7B-204ENST00000400370 SLITRK3O94933 977 aa11.27□□□□□ -0.61
ATP7B-204ENST00000400370 ARP10275 920 aa11.27□□□□□ -0.61
ATP7B-204ENST00000400370 PON1P27169 355 aa11.27□□□□□ -0.61
ATP7B-204ENST00000400370 PPP1R2P41236 205 aa11.27□□□□□ -0.61
ATP7B-204ENST00000400370 TUBB2AQ13885 445 aa11.27□□□□□ -0.61
ATP7B-204ENST00000400370 NBPF9Q3BBW0 867 aa11.27□□□□□ -0.61
ATP7B-204ENST00000400370 SFMBT2Q5VUG0 894 aa11.27□□□□□ -0.61
ATP7B-204ENST00000400370 DCAF15Q66K64 600 aa11.27□□□□□ -0.61
ATP7B-204ENST00000400370 SAMD7Q7Z3H4 446 aa11.27□□□□□ -0.61
ATP7B-204ENST00000400370 TRIM58Q8NG06 486 aa11.27□□□□□ -0.61
ATP7B-204ENST00000400370 GMCL1Q96IK5 515 aa11.27□□□□□ -0.61
ATP7B-204ENST00000400370 DYDC2Q96IM9 177 aa11.27□□□□□ -0.61
ATP7B-204ENST00000400370 FIZ1Q96SL8 496 aa11.27□□□□□ -0.61
ATP7B-204ENST00000400370 TUBB2BQ9BVA1 445 aa11.27□□□□□ -0.61
ATP7B-204ENST00000400370 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.27□□□□□ -0.612e-6■■■■■ 97.3
ATP7B-204ENST00000400370 LCMT1Q9UIC8 334 aa11.27□□□□□ -0.61
ATP7B-204ENST00000400370 RBAK-RBAKDNI3L0D1 243 aa11.27□□□□□ -0.61
ATP7B-204ENST00000400370 GLI1P08151 1106 aa11.27□□□□□ -0.61
ATP7B-204ENST00000400370 MARSP56192 900 aaKnown RBP11.27□□□□□ -0.61
ATP7B-204ENST00000400370 NOL9Q5SY16 702 aaKnown RBP11.27□□□□□ -0.61
ATP7B-204ENST00000400370 RINT1Q6NUQ1 792 aa11.27□□□□□ -0.61
ATP7B-204ENST00000400370 TPH2Q8IWU9 490 aa11.27□□□□□ -0.61
ATP7B-204ENST00000400370 BMP2KQ9NSY1 1161 aaPredicted RBP11.27□□□□□ -0.61
ATP7B-204ENST00000400370 GRID2IPA4D2P6 1211 aa11.26□□□□□ -0.61
ATP7B-204ENST00000400370 DDX39AO00148 427 aaKnown RBP11.26□□□□□ -0.61
ATP7B-204ENST00000400370 PJA2O43164 708 aa11.26□□□□□ -0.61
ATP7B-204ENST00000400370 FAM153BP0C7A2 387 aa11.26□□□□□ -0.61
ATP7B-204ENST00000400370 KNOP1Q1ED39 458 aaKnown RBP11.26□□□□□ -0.61
ATP7B-204ENST00000400370 FAM153CQ494X1 144 aa11.26□□□□□ -0.61
ATP7B-204ENST00000400370 OTOP1Q7RTM1 612 aa11.26□□□□□ -0.61
ATP7B-204ENST00000400370 SULF1Q8IWU6 871 aa11.26□□□□□ -0.61
ATP7B-204ENST00000400370 ELMO3Q96BJ8 720 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms