RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 ARMC9Q7Z3E5 817 aa18.56■□□□□ 0.56
PTPRA-205ENST00000399903 ANKRD42Q8N9B4 389 aa18.56■□□□□ 0.56
PTPRA-205ENST00000399903 UBA5Q9GZZ9 404 aa18.56■□□□□ 0.56
PTPRA-205ENST00000399903 ZCWPW1Q9H0M4 648 aa18.56■□□□□ 0.56
PTPRA-205ENST00000399903 DUOX1Q9NRD9 1551 aa18.56■□□□□ 0.56
PTPRA-205ENST00000399903 PJA2O43164 708 aa18.56■□□□□ 0.56
PTPRA-205ENST00000399903 RBBP5Q15291 538 aaKnown RBP18.56■□□□□ 0.56
PTPRA-205ENST00000399903 HGSNATQ68CP4 663 aa18.56■□□□□ 0.56
PTPRA-205ENST00000399903 KRT27Q7Z3Y8 459 aa18.56■□□□□ 0.56
PTPRA-205ENST00000399903 ANKS1AQ92625 1134 aa18.56■□□□□ 0.56
PTPRA-205ENST00000399903 RTFDC1Q9BY42 306 aaPredicted RBP18.56■□□□□ 0.56
PTPRA-205ENST00000399903 FAM129AQ9BZQ8 928 aa18.56■□□□□ 0.56
PTPRA-205ENST00000399903 IRAK4Q9NWZ3 460 aa18.56■□□□□ 0.56
PTPRA-205ENST00000399903 CACNB3P54284 484 aa18.56■□□□□ 0.56
PTPRA-205ENST00000399903 TMC3Q7Z5M5 1100 aa18.56■□□□□ 0.56
PTPRA-205ENST00000399903 ZSCAN29Q8IWY8 852 aaPredicted RBP18.56■□□□□ 0.56
PTPRA-205ENST00000399903 C4orf32Q8N8J7 132 aa18.56■□□□□ 0.56
PTPRA-205ENST00000399903 FMO2Q99518 471 aa18.56■□□□□ 0.56
PTPRA-205ENST00000399903 ARHGEF10LQ9HCE6 1279 aa18.56■□□□□ 0.56
PTPRA-205ENST00000399903 F8VZ95 297 aa18.55■□□□□ 0.56
PTPRA-205ENST00000399903 SMIM24O75264 130 aa18.55■□□□□ 0.56
PTPRA-205ENST00000399903 SERPING1P05155 500 aa18.55■□□□□ 0.56
PTPRA-205ENST00000399903 FGRP09769 529 aa18.55■□□□□ 0.56
PTPRA-205ENST00000399903 CALML3P27482 149 aa18.55■□□□□ 0.56
PTPRA-205ENST00000399903 AMPD3Q01432 767 aa18.55■□□□□ 0.56
PTPRA-205ENST00000399903 ASIC2Q16515 512 aa18.55■□□□□ 0.56
PTPRA-205ENST00000399903 EMC10Q5UCC4 262 aa18.55■□□□□ 0.56
PTPRA-205ENST00000399903 METTL13Q8N6R0 699 aa18.55■□□□□ 0.56
PTPRA-205ENST00000399903 CALML4Q96GE6 196 aa18.55■□□□□ 0.56
PTPRA-205ENST00000399903 RBM17Q96I25 401 aaKnown RBP18.55■□□□□ 0.56
PTPRA-205ENST00000399903 PCDHAC2Q9Y5I4 1007 aa18.55■□□□□ 0.56
PTPRA-205ENST00000399903 CYTH3O43739 400 aa18.55■□□□□ 0.56
PTPRA-205ENST00000399903 KRT13P13646 458 aa18.55■□□□□ 0.56
PTPRA-205ENST00000399903 HNRNPH3P31942 346 aaKnown RBP18.55■□□□□ 0.56
PTPRA-205ENST00000399903 PCK1P35558 622 aa18.55■□□□□ 0.56
PTPRA-205ENST00000399903 CACNB1Q02641 598 aaPredicted RBP18.55■□□□□ 0.56
PTPRA-205ENST00000399903 LLGL1Q15334 1064 aa18.55■□□□□ 0.56
PTPRA-205ENST00000399903 ERMARDQ5T6L9 678 aa18.55■□□□□ 0.56
PTPRA-205ENST00000399903 AGBL2Q5U5Z8 902 aa18.55■□□□□ 0.56
PTPRA-205ENST00000399903 TMEM47Q9BQJ4 181 aa18.55■□□□□ 0.56
PTPRA-205ENST00000399903 OSBPL1AQ9BXW6 950 aa18.55■□□□□ 0.56
PTPRA-205ENST00000399903 BATF3Q9NR55 127 aa18.55■□□□□ 0.56
PTPRA-205ENST00000399903 SNX24Q9Y343 169 aa18.55■□□□□ 0.56
PTPRA-205ENST00000399903 DDAH1O94760 285 aa18.54■□□□□ 0.56
PTPRA-205ENST00000399903 NQO1P15559 274 aaKnown RBP18.54■□□□□ 0.56
PTPRA-205ENST00000399903 PPP2R5BQ15173 497 aa18.54■□□□□ 0.56
PTPRA-205ENST00000399903 PFKFB3Q16875 520 aaPredicted RBP18.54■□□□□ 0.56
PTPRA-205ENST00000399903 SV2BQ7L1I2 683 aa18.54■□□□□ 0.56
PTPRA-205ENST00000399903 CCDC26Q8TAB7 109 aa18.54■□□□□ 0.56
PTPRA-205ENST00000399903 TSG101Q99816 390 aa18.54■□□□□ 0.56
PTPRA-205ENST00000399903 DBR1Q9UK59 544 aaKnown RBP18.54■□□□□ 0.56
PTPRA-205ENST00000399903 FRMPD2Q68DX3 1309 aaPredicted RBP18.54■□□□□ 0.56
PTPRA-205ENST00000399903 FAM196BA6NMK8 535 aa18.54■□□□□ 0.56
PTPRA-205ENST00000399903 CALM1P0DP23 149 aa18.54■□□□□ 0.56
PTPRA-205ENST00000399903 CALM2P0DP24 149 aa18.54■□□□□ 0.56
PTPRA-205ENST00000399903 CALM3P0DP25 149 aa18.54■□□□□ 0.56
PTPRA-205ENST00000399903 ACTN1P12814 892 aa18.54■□□□□ 0.56
PTPRA-205ENST00000399903 CEP120Q8N960 986 aa18.54■□□□□ 0.56
PTPRA-205ENST00000399903 EBF2Q9HAK2 575 aa18.54■□□□□ 0.56
PTPRA-205ENST00000399903 KCNK9Q9NPC2 374 aa18.54■□□□□ 0.56
PTPRA-205ENST00000399903 PNMA3Q9UL41 463 aa18.54■□□□□ 0.56
PTPRA-205ENST00000399903 TIAM2Q8IVF5 1701 aa18.54■□□□□ 0.56
PTPRA-205ENST00000399903 CASZ1Q86V15 1759 aa18.54■□□□□ 0.56
PTPRA-205ENST00000399903 C5orf60A6NFR6 353 aa18.54■□□□□ 0.56
PTPRA-205ENST00000399903 KRT16P08779 473 aa18.54■□□□□ 0.56
PTPRA-205ENST00000399903 RASA1P20936 1047 aa18.54■□□□□ 0.56
PTPRA-205ENST00000399903 INHBEP58166 350 aa18.54■□□□□ 0.56
PTPRA-205ENST00000399903 KCNMA1Q12791 1236 aa18.54■□□□□ 0.56
PTPRA-205ENST00000399903 DENND2CQ68D51 928 aa18.54■□□□□ 0.56
PTPRA-205ENST00000399903 MAB21L3Q8N8X9 362 aa18.54■□□□□ 0.56
PTPRA-205ENST00000399903 GDAP1Q8TB36 358 aa18.54■□□□□ 0.56
PTPRA-205ENST00000399903 GLG1Q92896 1179 aa18.54■□□□□ 0.56
PTPRA-205ENST00000399903 EYA3Q99504 573 aa18.54■□□□□ 0.56
PTPRA-205ENST00000399903 ATP6V0A2Q9Y487 856 aa18.54■□□□□ 0.56
PTPRA-205ENST00000399903 H0Y3Z8 333 aa18.53■□□□□ 0.56
PTPRA-205ENST00000399903 POLRMTO00411 1230 aaKnown RBP18.53■□□□□ 0.56
PTPRA-205ENST00000399903 IRF6O14896 467 aa18.53■□□□□ 0.56
PTPRA-205ENST00000399903 LGR5O75473 907 aa18.53■□□□□ 0.56
PTPRA-205ENST00000399903 FGGP02679 453 aa18.53■□□□□ 0.56
PTPRA-205ENST00000399903 GHRP10912 638 aa18.53■□□□□ 0.56
PTPRA-205ENST00000399903 CDK8P49336 464 aa18.53■□□□□ 0.56
PTPRA-205ENST00000399903 MIS18BP1Q6P0N0 1132 aa18.53■□□□□ 0.56
PTPRA-205ENST00000399903 LRRC47Q8N1G4 583 aaKnown RBP18.53■□□□□ 0.56
PTPRA-205ENST00000399903 FGFR1OP2Q9NVK5 253 aa18.53■□□□□ 0.56
PTPRA-205ENST00000399903 PCDHA4Q9UN74 947 aa18.53■□□□□ 0.56
PTPRA-205ENST00000399903 SCN7AQ01118 1682 aa18.53■□□□□ 0.56
PTPRA-205ENST00000399903 FGFR1OPO95684 399 aaKnown RBP18.53■□□□□ 0.56
PTPRA-205ENST00000399903 LACTBP83111 547 aaPredicted RBP18.53■□□□□ 0.56
PTPRA-205ENST00000399903 ZNF211Q13398 564 aaPredicted RBP18.53■□□□□ 0.56
PTPRA-205ENST00000399903 SLC18A3Q16572 532 aa18.53■□□□□ 0.56
PTPRA-205ENST00000399903 HOOK3Q86VS8 718 aa18.53■□□□□ 0.56
PTPRA-205ENST00000399903 SEPT11Q9NVA2 429 aaKnown RBP18.53■□□□□ 0.56
PTPRA-205ENST00000399903 ATP11AP98196 1134 aa18.52■□□□□ 0.56
PTPRA-205ENST00000399903 SBK1Q52WX2 424 aa18.52■□□□□ 0.56
PTPRA-205ENST00000399903 C3orf20Q8ND61 904 aa18.52■□□□□ 0.56
PTPRA-205ENST00000399903 CNOT10Q9H9A5 744 aaKnown RBP18.52■□□□□ 0.56
PTPRA-205ENST00000399903 SSU72P8A0A1W2PR75 194 aa18.52■□□□□ 0.56
PTPRA-205ENST00000399903 LCA5LO95447 670 aa18.52■□□□□ 0.56
PTPRA-205ENST00000399903 KIF5BP33176 963 aa18.52■□□□□ 0.56
PTPRA-205ENST00000399903 ASTE1Q2TB18 679 aaPredicted RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms