RNA–Protein interactions for RNA: ENST00000399793.6

RETREG1-202, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best) BASIC

Gene RETREG1, Length 3,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-202ENST00000399793 LRRC43Q8N309 656 aa9.43□□□□□ -0.9
RETREG1-202ENST00000399793 RSPH1Q8WYR4 309 aa9.43□□□□□ -0.9
RETREG1-202ENST00000399793 DYDC2Q96IM9 177 aa9.43□□□□□ -0.9
RETREG1-202ENST00000399793 MPHOSPH6Q99547 160 aaKnown RBP9.43□□□□□ -0.9
RETREG1-202ENST00000399793 UBA5Q9GZZ9 404 aa9.43□□□□□ -0.9
RETREG1-202ENST00000399793 PFDN4Q9NQP4 134 aa9.43□□□□□ -0.9
RETREG1-202ENST00000399793 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.43□□□□□ -0.9
RETREG1-202ENST00000399793 SUCLA2Q9P2R7 463 aaPredicted RBP9.43□□□□□ -0.9
RETREG1-202ENST00000399793 DENND2AQ9ULE3 1009 aa9.43□□□□□ -0.9
RETREG1-202ENST00000399793 ANGEL1Q9UNK9 670 aaKnown RBP9.43□□□□□ -0.9
RETREG1-202ENST00000399793 KCNK3O14649 394 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 GTPBP6O43824 516 aaPredicted RBP9.42□□□□□ -0.9
RETREG1-202ENST00000399793 ATP5HO75947 161 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 FGAP02671 866 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 RPN1P04843 607 aaKnown RBP9.42□□□□□ -0.9
RETREG1-202ENST00000399793 NUDT17P0C025 328 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 POTEJP0CG39 1038 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 PYGMP11217 842 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 PSMD7P51665 324 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 HDAC4P56524 1084 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 GIT2Q14161 759 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 RCN1Q15293 331 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 WDR72Q3MJ13 1102 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 USH1GQ495M9 461 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 FIGNQ5HY92 759 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 CFAP157Q5JU67 520 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 SYDE2Q5VT97 1194 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 C3orf67Q6ZVT6 689 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 ADSSL1Q8N142 457 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 PDCD7Q8N8D1 485 aaKnown RBP9.42□□□□□ -0.9
RETREG1-202ENST00000399793 NMD3Q96D46 503 aaKnown RBP9.42□□□□□ -0.9
RETREG1-202ENST00000399793 MYL10Q9BUA6 226 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 FOXP1Q9H334 677 aaPredicted RBP9.42□□□□□ -0.9
RETREG1-202ENST00000399793 SOS2Q07890 1332 aaPredicted RBP9.42□□□□□ -0.9
RETREG1-202ENST00000399793 HTR3EA5X5Y0 456 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 EPHB6O15197 1021 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 FOXP2O15409 715 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 TTI1O43156 1089 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 GALK1P51570 392 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 SSRP1Q08945 709 aaKnown RBP9.42□□□□□ -0.9
RETREG1-202ENST00000399793 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.42□□□□□ -0.9
RETREG1-202ENST00000399793 SOGA3Q5TF21 947 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 CGB2Q6NT52 195 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 INTS8Q75QN2 995 aaKnown RBP9.42□□□□□ -0.9
RETREG1-202ENST00000399793 MARK2Q7KZI7 788 aaKnown RBP9.42□□□□□ -0.9
RETREG1-202ENST00000399793 COL23A1Q86Y22 540 aaPredicted RBP9.42□□□□□ -0.9
RETREG1-202ENST00000399793 NKX2-3Q8TAU0 364 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 OXER1Q8TDS5 423 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 TAF4BQ92750 862 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 INPP5DQ92835 1189 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 SLC7A6OSQ96CW6 309 aaPredicted RBP9.42□□□□□ -0.9
RETREG1-202ENST00000399793 FMO2Q99518 471 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 CCDC28BQ9BUN5 200 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 TRIM31Q9BZY9 425 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 KIAA1683Q9H0B3 1180 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 ASCC2Q9H1I8 757 aaPredicted RBP9.42□□□□□ -0.9
RETREG1-202ENST00000399793 FAM217BQ9NTX9 383 aaPredicted RBP9.42□□□□□ -0.9
RETREG1-202ENST00000399793 BABAM1Q9NWV8 329 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 SEC63Q9UGP8 760 aaKnown RBP9.42□□□□□ -0.9
RETREG1-202ENST00000399793 TMED5Q9Y3A6 229 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 TMEM94Q12767 1356 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 RNF113AO15541 343 aaKnown RBP9.42□□□□□ -0.9
RETREG1-202ENST00000399793 ASMTLO95671 621 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 SLCO1A2P46721 670 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 MYBPC2Q14324 1141 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 SH3D19Q5HYK7 790 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 C6orf118Q5T5N4 469 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 DENND2CQ68D51 928 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 PHLDB3Q6NSJ2 640 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 TRIM50Q86XT4 487 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 KBTBD2Q8IY47 623 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 PPFIBP2Q8ND30 876 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 ERP27Q96DN0 273 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 OLFM3Q96PB7 478 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 CELF4Q9BZC1 486 aaKnown RBP9.42□□□□□ -0.9
RETREG1-202ENST00000399793 ZMYND12Q9H0C1 365 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 MLXIPLQ9NP71 852 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 TRPV5Q9NQA5 729 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 STK32BQ9NY57 414 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 DDX25Q9UHL0 483 aaKnown RBP9.42□□□□□ -0.9
RETREG1-202ENST00000399793 TBC1D30Q9Y2I9 924 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 SPATA31D1Q6ZQQ2 1576 aa9.42□□□□□ -0.9
RETREG1-202ENST00000399793 PASKQ96RG2 1323 aa9.41□□□□□ -0.9
RETREG1-202ENST00000399793 AKAP12Q02952 1782 aa9.41□□□□□ -0.9
RETREG1-202ENST00000399793 MRC2Q9UBG0 1479 aa9.41□□□□□ -0.9
RETREG1-202ENST00000399793 P4HA2O15460 535 aa9.41□□□□□ -0.9
RETREG1-202ENST00000399793 ZBTB43O43298 467 aa9.41□□□□□ -0.9
RETREG1-202ENST00000399793 PABPC4LP0CB38 370 aaKnown RBP9.41□□□□□ -0.9
RETREG1-202ENST00000399793 KLRC1P26715 233 aa9.41□□□□□ -0.9
RETREG1-202ENST00000399793 NEK3P51956 506 aa9.41□□□□□ -0.9
RETREG1-202ENST00000399793 MTTPP55157 894 aa9.41□□□□□ -0.9
RETREG1-202ENST00000399793 KCNMA1Q12791 1236 aa9.41□□□□□ -0.9
RETREG1-202ENST00000399793 SPDYCQ5MJ68 293 aa9.41□□□□□ -0.9
RETREG1-202ENST00000399793 RFWD3Q6PCD5 774 aa9.41□□□□□ -0.9
RETREG1-202ENST00000399793 KSR2Q6VAB6 950 aa9.41□□□□□ -0.9
RETREG1-202ENST00000399793 HS2ST1Q7LGA3 356 aa9.41□□□□□ -0.9
RETREG1-202ENST00000399793 NEK9Q8TD19 979 aa9.41□□□□□ -0.9
RETREG1-202ENST00000399793 OSBP2Q969R2 916 aa9.41□□□□□ -0.9
RETREG1-202ENST00000399793 ERGIC2Q96RQ1 377 aa9.41□□□□□ -0.9
RETREG1-202ENST00000399793 SMC6Q96SB8 1091 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms