RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 ITGB5P18084 799 aa19.43■□□□□ 0.7
HLA-DQB1-204ENST00000399084 OAZ1P54368 228 aa19.43■□□□□ 0.7
HLA-DQB1-204ENST00000399084 ASIC2Q16515 512 aa19.43■□□□□ 0.7
HLA-DQB1-204ENST00000399084 TDRD12Q587J7 1177 aaKnown RBP19.43■□□□□ 0.7
HLA-DQB1-204ENST00000399084 CCDC70Q6NSX1 233 aa19.43■□□□□ 0.7
HLA-DQB1-204ENST00000399084 ZNF572Q7Z3I7 529 aaPredicted RBP19.43■□□□□ 0.7
HLA-DQB1-204ENST00000399084 MIER3Q7Z3K6 550 aa19.43■□□□□ 0.7
HLA-DQB1-204ENST00000399084 DEFB132Q7Z7B7 95 aa19.43■□□□□ 0.7
HLA-DQB1-204ENST00000399084 CDAN1Q8IWY9 1227 aa19.43■□□□□ 0.7
HLA-DQB1-204ENST00000399084 PIGOQ8TEQ8 1089 aa19.43■□□□□ 0.7
HLA-DQB1-204ENST00000399084 VTI1AQ96AJ9 217 aa19.43■□□□□ 0.7
HLA-DQB1-204ENST00000399084 ANKZF1Q9H8Y5 726 aa19.43■□□□□ 0.7
HLA-DQB1-204ENST00000399084 LARSQ9P2J5 1176 aaKnown RBP19.43■□□□□ 0.7
HLA-DQB1-204ENST00000399084 ZNF112Q9UJU3 913 aa19.43■□□□□ 0.7
HLA-DQB1-204ENST00000399084 TGFB1I1O43294 461 aa19.42■□□□□ 0.7
HLA-DQB1-204ENST00000399084 ATP1A1P05023 1023 aaKnown RBP19.42■□□□□ 0.7
HLA-DQB1-204ENST00000399084 PLEKP08567 350 aaPredicted RBP19.42■□□□□ 0.7
HLA-DQB1-204ENST00000399084 SFNP31947 248 aa19.42■□□□□ 0.7
HLA-DQB1-204ENST00000399084 PRKCIP41743 596 aa19.42■□□□□ 0.7
HLA-DQB1-204ENST00000399084 KLHDC7AQ5VTJ3 777 aa19.42■□□□□ 0.7
HLA-DQB1-204ENST00000399084 BORCS6Q96GS4 357 aa19.42■□□□□ 0.7
HLA-DQB1-204ENST00000399084 IWS1Q96ST2 819 aa19.42■□□□□ 0.7
HLA-DQB1-204ENST00000399084 LXNQ9BS40 222 aa19.42■□□□□ 0.7
HLA-DQB1-204ENST00000399084 STRA6Q9BX79 667 aa19.42■□□□□ 0.7
HLA-DQB1-204ENST00000399084 TMEM206Q9H813 350 aa19.42■□□□□ 0.7
HLA-DQB1-204ENST00000399084 NLRC4Q9NPP4 1024 aa19.42■□□□□ 0.7
HLA-DQB1-204ENST00000399084 DMAC2Q9NW81 257 aa19.42■□□□□ 0.7
HLA-DQB1-204ENST00000399084 SNX12Q9UMY4 172 aa19.42■□□□□ 0.7
HLA-DQB1-204ENST00000399084 SMCHD1A6NHR9 2005 aa19.42■□□□□ 0.7
HLA-DQB1-204ENST00000399084 RSPH10B2B2RC85 870 aa19.42■□□□□ 0.7
HLA-DQB1-204ENST00000399084 CHMP2AO43633 222 aa19.42■□□□□ 0.7
HLA-DQB1-204ENST00000399084 AKAP3O75969 853 aa19.42■□□□□ 0.7
HLA-DQB1-204ENST00000399084 RSPH10BP0C881 870 aa19.42■□□□□ 0.7
HLA-DQB1-204ENST00000399084 KLHL30Q0D2K2 578 aa19.42■□□□□ 0.7
HLA-DQB1-204ENST00000399084 TKFCQ3LXA3 575 aa19.42■□□□□ 0.7
HLA-DQB1-204ENST00000399084 SYTL5Q8TDW5 730 aaPredicted RBP19.42■□□□□ 0.7
HLA-DQB1-204ENST00000399084 UBE2Q2Q8WVN8 375 aa19.42■□□□□ 0.7
HLA-DQB1-204ENST00000399084 SLC35C1Q96A29 364 aa19.42■□□□□ 0.7
HLA-DQB1-204ENST00000399084 ST6GALNAC4Q9H4F1 302 aa19.42■□□□□ 0.7
HLA-DQB1-204ENST00000399084 AGO4Q9HCK5 861 aaKnown RBP19.42■□□□□ 0.7
HLA-DQB1-204ENST00000399084 FRMD4BQ9Y2L6 1034 aa19.42■□□□□ 0.7
HLA-DQB1-204ENST00000399084 MACROD2A1Z1Q3 448 aa19.41■□□□□ 0.7
HLA-DQB1-204ENST00000399084 C19orf81C9J6K1 198 aa19.41■□□□□ 0.7
HLA-DQB1-204ENST00000399084 FZD9O00144 591 aa19.41■□□□□ 0.7
HLA-DQB1-204ENST00000399084 DHX15O43143 795 aaKnown RBP19.41■□□□□ 0.7
HLA-DQB1-204ENST00000399084 TLR2O60603 784 aa19.41■□□□□ 0.7
HLA-DQB1-204ENST00000399084 UCHL3P15374 230 aa19.41■□□□□ 0.7
HLA-DQB1-204ENST00000399084 TAL1P17542 331 aaPredicted RBP19.41■□□□□ 0.7
HLA-DQB1-204ENST00000399084 PON1P27169 355 aa19.41■□□□□ 0.7
HLA-DQB1-204ENST00000399084 QARSP47897 775 aaKnown RBP19.41■□□□□ 0.7
HLA-DQB1-204ENST00000399084 JAK3P52333 1124 aa19.41■□□□□ 0.7
HLA-DQB1-204ENST00000399084 IFI16Q16666 785 aaKnown RBP19.41■□□□□ 0.7
HLA-DQB1-204ENST00000399084 VPS36Q86VN1 386 aa19.41■□□□□ 0.7
HLA-DQB1-204ENST00000399084 C12orf42Q96LP6 360 aa19.41■□□□□ 0.7
HLA-DQB1-204ENST00000399084 SPAG5Q96R06 1193 aa19.41■□□□□ 0.7
HLA-DQB1-204ENST00000399084 FIZ1Q96SL8 496 aa19.41■□□□□ 0.7
HLA-DQB1-204ENST00000399084 ARID3AQ99856 593 aa19.41■□□□□ 0.7
HLA-DQB1-204ENST00000399084 TCEAL9Q9UHQ7 104 aa19.41■□□□□ 0.7
HLA-DQB1-204ENST00000399084 NFKBIEO00221 500 aa19.4■□□□□ 0.7
HLA-DQB1-204ENST00000399084 FLOT1O75955 427 aa19.4■□□□□ 0.7
HLA-DQB1-204ENST00000399084 CCDC172P0C7W6 258 aa19.4■□□□□ 0.7
HLA-DQB1-204ENST00000399084 ALAS1P13196 640 aa19.4■□□□□ 0.7
HLA-DQB1-204ENST00000399084 RFX1P22670 979 aa19.4■□□□□ 0.7
HLA-DQB1-204ENST00000399084 GPS2Q13227 327 aa19.4■□□□□ 0.7
HLA-DQB1-204ENST00000399084 NAB2Q15742 525 aa19.4■□□□□ 0.7
HLA-DQB1-204ENST00000399084 MAP9Q49MG5 647 aa19.4■□□□□ 0.7
HLA-DQB1-204ENST00000399084 ODR4Q5SWX8 454 aa19.4■□□□□ 0.7
HLA-DQB1-204ENST00000399084 DPY19L2P1Q6NXN4 242 aa19.4■□□□□ 0.7
HLA-DQB1-204ENST00000399084 HDXQ7Z353 690 aa19.4■□□□□ 0.7
HLA-DQB1-204ENST00000399084 APOBEC3FQ8IUX4 373 aaKnown RBP19.4■□□□□ 0.7
HLA-DQB1-204ENST00000399084 C12orf56Q8IXR9 622 aa19.4■□□□□ 0.7
HLA-DQB1-204ENST00000399084 C4orf19Q8IY42 314 aa19.4■□□□□ 0.7
HLA-DQB1-204ENST00000399084 FAM186BQ8IYM0 893 aa19.4■□□□□ 0.7
HLA-DQB1-204ENST00000399084 SCYL3Q8IZE3 742 aa19.4■□□□□ 0.7
HLA-DQB1-204ENST00000399084 HYOU1Q9Y4L1 999 aa19.4■□□□□ 0.7
HLA-DQB1-204ENST00000399084 PPP2R3BQ9Y5P8 575 aa19.4■□□□□ 0.7
HLA-DQB1-204ENST00000399084 BRCA1P38398 1863 aaKnown RBP19.4■□□□□ 0.7
HLA-DQB1-204ENST00000399084 NFIBO00712 420 aa19.39■□□□□ 0.7
HLA-DQB1-204ENST00000399084 MAPK13O15264 365 aa19.39■□□□□ 0.7
HLA-DQB1-204ENST00000399084 DKC1O60832 514 aaKnown RBP eCLIP19.39■□□□□ 0.7
HLA-DQB1-204ENST00000399084 PPP1R37O75864 691 aa19.39■□□□□ 0.7
HLA-DQB1-204ENST00000399084 TBC1D8O95759 1140 aa19.39■□□□□ 0.7
HLA-DQB1-204ENST00000399084 KRT76Q01546 638 aa19.39■□□□□ 0.7
HLA-DQB1-204ENST00000399084 MTMR1Q13613 665 aa19.39■□□□□ 0.7
HLA-DQB1-204ENST00000399084 RAPGEF1Q13905 1077 aa19.39■□□□□ 0.7
HLA-DQB1-204ENST00000399084 LONRF2Q1L5Z9 754 aa19.39■□□□□ 0.7
HLA-DQB1-204ENST00000399084 UTP14CQ5TAP6 766 aaKnown RBP19.39■□□□□ 0.7
HLA-DQB1-204ENST00000399084 PADI6Q6TGC4 694 aa19.39■□□□□ 0.7
HLA-DQB1-204ENST00000399084 CRACR2AQ9BSW2 395 aa19.39■□□□□ 0.7
HLA-DQB1-204ENST00000399084 CNOT7Q9UIV1 285 aaKnown RBP19.39■□□□□ 0.7
HLA-DQB1-204ENST00000399084 INTUQ9ULD6 942 aa19.39■□□□□ 0.7
HLA-DQB1-204ENST00000399084 DUSP10Q9Y6W6 482 aa19.39■□□□□ 0.7
HLA-DQB1-204ENST00000399084 RBBP6Q7Z6E9 1792 aaKnown RBP19.39■□□□□ 0.69
HLA-DQB1-204ENST00000399084 ENC1O14682 589 aa19.39■□□□□ 0.69
HLA-DQB1-204ENST00000399084 VCAM1P19320 739 aa19.39■□□□□ 0.69
HLA-DQB1-204ENST00000399084 BACE1P56817 501 aa19.39■□□□□ 0.69
HLA-DQB1-204ENST00000399084 UBXN2AP68543 259 aa19.39■□□□□ 0.69
HLA-DQB1-204ENST00000399084 MICALL2Q8IY33 904 aa19.39■□□□□ 0.69
HLA-DQB1-204ENST00000399084 FUT8Q9BYC5 575 aa19.39■□□□□ 0.69
HLA-DQB1-204ENST00000399084 ANKEF1Q9NU02 776 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms