RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 FOXD4L4Q8WXT5 416 aaPredicted RBP11.7□□□□□ -0.54
CYCSP55-201ENST00000399027 AK8Q96MA6 479 aa11.7□□□□□ -0.54
CYCSP55-201ENST00000399027 WNT8AQ9H1J5 351 aa11.7□□□□□ -0.54
CYCSP55-201ENST00000399027 SEPT9Q9UHD8 586 aaPredicted RBP11.7□□□□□ -0.54
CYCSP55-201ENST00000399027 PCDHA2Q9Y5H9 948 aa11.7□□□□□ -0.54
CYCSP55-201ENST00000399027 SRPRBQ9Y5M8 271 aaKnown RBP11.7□□□□□ -0.54
CYCSP55-201ENST00000399027 MYH11P35749 1972 aa11.7□□□□□ -0.54
CYCSP55-201ENST00000399027 PDE4DIPQ5VU43 2346 aa11.7□□□□□ -0.54
CYCSP55-201ENST00000399027 PTPRSQ13332 1948 aa11.69□□□□□ -0.54
CYCSP55-201ENST00000399027 IGKV6-21A0A0C4DH24 114 aa11.69□□□□□ -0.54
CYCSP55-201ENST00000399027 MAGEB2O15479 319 aa11.69□□□□□ -0.54
CYCSP55-201ENST00000399027 SLC26A4O43511 780 aa11.69□□□□□ -0.54
CYCSP55-201ENST00000399027 PPP6R2O75170 966 aa11.69□□□□□ -0.54
CYCSP55-201ENST00000399027 YEATS4O95619 227 aa11.69□□□□□ -0.54
CYCSP55-201ENST00000399027 CKBP12277 381 aa11.69□□□□□ -0.54
CYCSP55-201ENST00000399027 KLRC1P26715 233 aa11.69□□□□□ -0.54
CYCSP55-201ENST00000399027 LONP1P36776 959 aaKnown RBP11.69□□□□□ -0.54
CYCSP55-201ENST00000399027 IGBP1P78318 339 aa11.69□□□□□ -0.54
CYCSP55-201ENST00000399027 NUCB2P80303 420 aa11.69□□□□□ -0.54
CYCSP55-201ENST00000399027 FAM26DQ5JW98 314 aa11.69□□□□□ -0.54
CYCSP55-201ENST00000399027 HYIQ5T013 277 aa11.69□□□□□ -0.54
CYCSP55-201ENST00000399027 TRAF7Q6Q0C0 670 aa11.69□□□□□ -0.54
CYCSP55-201ENST00000399027 RUFY4Q6ZNE9 571 aa11.69□□□□□ -0.54
CYCSP55-201ENST00000399027 OTUD6AQ7L8S5 288 aa11.69□□□□□ -0.54
CYCSP55-201ENST00000399027 TPH2Q8IWU9 490 aa11.69□□□□□ -0.54
CYCSP55-201ENST00000399027 KCTD17Q8N5Z5 321 aa11.69□□□□□ -0.54
CYCSP55-201ENST00000399027 BADQ92934 168 aa11.69□□□□□ -0.54
CYCSP55-201ENST00000399027 GDF15Q99988 308 aa11.69□□□□□ -0.54
CYCSP55-201ENST00000399027 MMTAG2Q9BU76 263 aaKnown RBP11.69□□□□□ -0.54
CYCSP55-201ENST00000399027 PPP1R12CQ9BZL4 782 aa11.69□□□□□ -0.54
CYCSP55-201ENST00000399027 CYP26B1Q9NR63 512 aa11.69□□□□□ -0.54
CYCSP55-201ENST00000399027 ANKEF1Q9NU02 776 aa11.69□□□□□ -0.54
CYCSP55-201ENST00000399027 FBXO2Q9UK22 296 aaPredicted RBP11.69□□□□□ -0.54
CYCSP55-201ENST00000399027 MICAL3Q7RTP6 2002 aa11.69□□□□□ -0.54
CYCSP55-201ENST00000399027 KDM3AQ9Y4C1 1321 aa11.68□□□□□ -0.54
CYCSP55-201ENST00000399027 TMEM150BA6NC51 233 aa11.68□□□□□ -0.54
CYCSP55-201ENST00000399027 DDX11L8A8MPP1 907 aa11.68□□□□□ -0.54
CYCSP55-201ENST00000399027 PP2D1A8MPX8 630 aa11.68□□□□□ -0.54
CYCSP55-201ENST00000399027 PARNO95453 639 aaKnown RBP11.68□□□□□ -0.54
CYCSP55-201ENST00000399027 IQCF3P0C7M6 154 aa11.68□□□□□ -0.54
CYCSP55-201ENST00000399027 SELPP16109 830 aa11.68□□□□□ -0.54
CYCSP55-201ENST00000399027 CYP2C18P33260 490 aa11.68□□□□□ -0.54
CYCSP55-201ENST00000399027 BMP8BP34820 402 aa11.68□□□□□ -0.54
CYCSP55-201ENST00000399027 RFC2P35250 354 aa11.68□□□□□ -0.54
CYCSP55-201ENST00000399027 CEBPZQ03701 1054 aaKnown RBP11.68□□□□□ -0.54
CYCSP55-201ENST00000399027 DNM1Q05193 864 aaKnown RBP11.68□□□□□ -0.54
CYCSP55-201ENST00000399027 GRIN1Q05586 938 aa11.68□□□□□ -0.54
CYCSP55-201ENST00000399027 MGAT3Q09327 533 aa11.68□□□□□ -0.54
CYCSP55-201ENST00000399027 ECM1Q16610 540 aa11.68□□□□□ -0.54
CYCSP55-201ENST00000399027 MTERF2Q49AM1 385 aa11.68□□□□□ -0.54
CYCSP55-201ENST00000399027 ZNF618Q5T7W0 954 aa11.68□□□□□ -0.54
CYCSP55-201ENST00000399027 PRPF38BQ5VTL8 546 aaKnown RBP11.68□□□□□ -0.54
CYCSP55-201ENST00000399027 KRT79Q5XKE5 535 aa11.68□□□□□ -0.54
CYCSP55-201ENST00000399027 PLA2G4FQ68DD2 849 aa11.68□□□□□ -0.54
CYCSP55-201ENST00000399027 LRRC8DQ7L1W4 858 aa11.68□□□□□ -0.54
CYCSP55-201ENST00000399027 TRMT1LQ7Z2T5 733 aaKnown RBP11.68□□□□□ -0.54
CYCSP55-201ENST00000399027 NME8Q8N427 588 aa11.68□□□□□ -0.54
CYCSP55-201ENST00000399027 TMEM199Q8N511 208 aa11.68□□□□□ -0.54
CYCSP55-201ENST00000399027 SNX29Q8TEQ0 813 aa11.68□□□□□ -0.54
CYCSP55-201ENST00000399027 ZBTB10Q96DT7 871 aa11.68□□□□□ -0.54
CYCSP55-201ENST00000399027 NACC1Q96RE7 527 aa11.68□□□□□ -0.54
CYCSP55-201ENST00000399027 PRO3102Q9H379 93 aa11.68□□□□□ -0.54
CYCSP55-201ENST00000399027 DHX33Q9H6R0 707 aaKnown RBP11.68□□□□□ -0.54
CYCSP55-201ENST00000399027 TSHZ2Q9NRE2 1034 aa11.68□□□□□ -0.54
CYCSP55-201ENST00000399027 DBR1Q9UK59 544 aaKnown RBP11.68□□□□□ -0.54
CYCSP55-201ENST00000399027 CFAP45Q9UL16 551 aa11.68□□□□□ -0.54
CYCSP55-201ENST00000399027 ATP6V1DQ9Y5K8 247 aa11.68□□□□□ -0.54
CYCSP55-201ENST00000399027 TET1Q8NFU7 2136 aa11.68□□□□□ -0.54
CYCSP55-201ENST00000399027 ZBTB39O15060 712 aa11.67□□□□□ -0.54
CYCSP55-201ENST00000399027 MAFO75444 373 aaPredicted RBP11.67□□□□□ -0.54
CYCSP55-201ENST00000399027 MARCKSP29966 332 aaPredicted RBP11.67□□□□□ -0.54
CYCSP55-201ENST00000399027 CDC25AP30304 524 aa11.67□□□□□ -0.54
CYCSP55-201ENST00000399027 THPOP40225 353 aa11.67□□□□□ -0.54
CYCSP55-201ENST00000399027 CCT6AP40227 531 aaKnown RBP11.67□□□□□ -0.54
CYCSP55-201ENST00000399027 MAGEA10P43363 369 aaPredicted RBP11.67□□□□□ -0.54
CYCSP55-201ENST00000399027 RARRES1P49788 294 aa11.67□□□□□ -0.54
CYCSP55-201ENST00000399027 NPEPPSP55786 919 aa11.67□□□□□ -0.54
CYCSP55-201ENST00000399027 FPGSQ05932 587 aa11.67□□□□□ -0.54
CYCSP55-201ENST00000399027 TBC1D8BQ0IIM8 1120 aa11.67□□□□□ -0.54
CYCSP55-201ENST00000399027 STK38Q15208 465 aa11.67□□□□□ -0.54
CYCSP55-201ENST00000399027 EFCAB12Q6NXP0 572 aa11.67□□□□□ -0.54
CYCSP55-201ENST00000399027 POTEGQ6S5H5 508 aa11.67□□□□□ -0.54
CYCSP55-201ENST00000399027 RSPH3Q86UC2 560 aa11.67□□□□□ -0.54
CYCSP55-201ENST00000399027 EXOC8Q8IYI6 725 aa11.67□□□□□ -0.54
CYCSP55-201ENST00000399027 KIAA0319LQ8IZA0 1049 aa11.67□□□□□ -0.54
CYCSP55-201ENST00000399027 ZNF579Q8NAF0 562 aaKnown RBP11.67□□□□□ -0.54
CYCSP55-201ENST00000399027 RETREG2Q8NC44 543 aa11.67□□□□□ -0.54
CYCSP55-201ENST00000399027 DNAJB3Q8WWF6 145 aa11.67□□□□□ -0.54
CYCSP55-201ENST00000399027 VWCEQ96DN2 955 aa11.67□□□□□ -0.54
CYCSP55-201ENST00000399027 CEP170P1Q96L14 293 aa11.67□□□□□ -0.54
CYCSP55-201ENST00000399027 LBHD1Q9BQE6 289 aaPredicted RBP11.67□□□□□ -0.54
CYCSP55-201ENST00000399027 PCDH10Q9P2E7 1040 aa11.67□□□□□ -0.54
CYCSP55-201ENST00000399027 TFIP11Q9UBB9 837 aaKnown RBP11.67□□□□□ -0.54
CYCSP55-201ENST00000399027 CIZ1Q9ULV3 898 aaPredicted RBP11.67□□□□□ -0.54
CYCSP55-201ENST00000399027 RBM19Q9Y4C8 960 aaKnown RBP11.67□□□□□ -0.54
CYCSP55-201ENST00000399027 GBF1Q92538 1859 aa11.67□□□□□ -0.54
CYCSP55-201ENST00000399027 SPTLC2O15270 562 aa11.66□□□□□ -0.54
CYCSP55-201ENST00000399027 GAS2O43903 313 aaKnown RBP11.66□□□□□ -0.54
CYCSP55-201ENST00000399027 CXCL10P02778 98 aa11.66□□□□□ -0.54
CYCSP55-201ENST00000399027 PFKMP08237 780 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms