RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 MMP10P09238 476 aa15.78■□□□□ 0.12
RPRD1A-202ENST00000399022 PSMD2Q13200 908 aa15.78■□□□□ 0.12
RPRD1A-202ENST00000399022 CDC37Q16543 378 aaPredicted RBP15.78■□□□□ 0.12
RPRD1A-202ENST00000399022 ARHGEF18Q6ZSZ5 1173 aa15.78■□□□□ 0.12
RPRD1A-202ENST00000399022 FBXO41Q8TF61 875 aa15.78■□□□□ 0.12
RPRD1A-202ENST00000399022 ABTB1Q969K4 478 aaPredicted RBP15.78■□□□□ 0.12
RPRD1A-202ENST00000399022 IMPG2Q9BZV3 1241 aa15.78■□□□□ 0.12
RPRD1A-202ENST00000399022 SYNCQ9H7C4 482 aa15.78■□□□□ 0.12
RPRD1A-202ENST00000399022 HPSEQ9Y251 543 aa15.78■□□□□ 0.12
RPRD1A-202ENST00000399022 POLR2MP0CAP2 368 aa15.78■□□□□ 0.12
RPRD1A-202ENST00000399022 AKR1B1P15121 316 aa15.78■□□□□ 0.12
RPRD1A-202ENST00000399022 ATP2A2P16615 1042 aaKnown RBP15.78■□□□□ 0.12
RPRD1A-202ENST00000399022 ADCY2Q08462 1091 aa15.78■□□□□ 0.12
RPRD1A-202ENST00000399022 ODR4Q5SWX8 454 aa15.78■□□□□ 0.12
RPRD1A-202ENST00000399022 MIER3Q7Z3K6 550 aa15.78■□□□□ 0.12
RPRD1A-202ENST00000399022 TXNRD3Q86VQ6 643 aa15.78■□□□□ 0.12
RPRD1A-202ENST00000399022 FNBP1Q96RU3 617 aa15.78■□□□□ 0.12
RPRD1A-202ENST00000399022 TESPA1A2RU30 521 aaPredicted RBP15.77■□□□□ 0.12
RPRD1A-202ENST00000399022 MESDQ14696 234 aa15.77■□□□□ 0.12
RPRD1A-202ENST00000399022 DBN1Q16643 649 aa15.77■□□□□ 0.12
RPRD1A-202ENST00000399022 KDM7AQ6ZMT4 941 aa15.77■□□□□ 0.12
RPRD1A-202ENST00000399022 DDX42Q86XP3 938 aaKnown RBP eCLIP15.77■□□□□ 0.12
RPRD1A-202ENST00000399022 CCDC127Q96BQ5 260 aa15.77■□□□□ 0.12
RPRD1A-202ENST00000399022 MAP3K14Q99558 947 aa15.77■□□□□ 0.12
RPRD1A-202ENST00000399022 TMEM60Q9H2L4 133 aa15.77■□□□□ 0.12
RPRD1A-202ENST00000399022 PCDHA6Q9UN73 950 aa15.77■□□□□ 0.12
RPRD1A-202ENST00000399022 PCDHA8Q9Y5H6 950 aa15.77■□□□□ 0.12
RPRD1A-202ENST00000399022 E9PMD0 336 aa15.77■□□□□ 0.12
RPRD1A-202ENST00000399022 RAD17O75943 681 aa15.77■□□□□ 0.12
RPRD1A-202ENST00000399022 SYF2O95926 243 aaKnown RBP15.77■□□□□ 0.12
RPRD1A-202ENST00000399022 CYP4F22Q6NT55 531 aa15.77■□□□□ 0.12
RPRD1A-202ENST00000399022 FBXO33Q7Z6M2 555 aa15.77■□□□□ 0.12
RPRD1A-202ENST00000399022 KIF2BQ8N4N8 673 aa15.77■□□□□ 0.12
RPRD1A-202ENST00000399022 HOOK2Q96ED9 719 aa15.77■□□□□ 0.12
RPRD1A-202ENST00000399022 RILPQ96NA2 401 aa15.77■□□□□ 0.12
RPRD1A-202ENST00000399022 PITPNM3Q9BZ71 974 aa15.77■□□□□ 0.12
RPRD1A-202ENST00000399022 C3P01024 1663 aa15.77■□□□□ 0.12
RPRD1A-202ENST00000399022 SLC4A9Q96Q91 983 aa15.77■□□□□ 0.11
RPRD1A-202ENST00000399022 BZW2Q9Y6E2 419 aaKnown RBP15.77■□□□□ 0.11
RPRD1A-202ENST00000399022 CNTNAP5Q8WYK1 1306 aa15.77■□□□□ 0.11
RPRD1A-202ENST00000399022 HSPA1LP34931 641 aa15.76■□□□□ 0.11
RPRD1A-202ENST00000399022 DPYDQ12882 1025 aa15.76■□□□□ 0.11
RPRD1A-202ENST00000399022 TBX2Q13207 712 aaPredicted RBP15.76■□□□□ 0.11
RPRD1A-202ENST00000399022 ZKSCAN4Q969J2 545 aaPredicted RBP15.76■□□□□ 0.11
RPRD1A-202ENST00000399022 CALR3Q96L12 384 aaKnown RBP15.76■□□□□ 0.11
RPRD1A-202ENST00000399022 RIC8AQ9NPQ8 531 aa15.76■□□□□ 0.11
RPRD1A-202ENST00000399022 PNMA2Q9UL42 364 aa15.76■□□□□ 0.11
RPRD1A-202ENST00000399022 PRPF6O94906 941 aaKnown RBP15.76■□□□□ 0.11
RPRD1A-202ENST00000399022 BMP3P12645 472 aa15.76■□□□□ 0.11
RPRD1A-202ENST00000399022 CD44P16070 742 aaKnown RBP15.76■□□□□ 0.11
RPRD1A-202ENST00000399022 C3orf67Q6ZVT6 689 aa15.76■□□□□ 0.11
RPRD1A-202ENST00000399022 NEDD1Q8NHV4 660 aa15.76■□□□□ 0.11
RPRD1A-202ENST00000399022 ANO3Q9BYT9 981 aa15.76■□□□□ 0.11
RPRD1A-202ENST00000399022 COA1Q9GZY4 146 aa15.76■□□□□ 0.11
RPRD1A-202ENST00000399022 BHMT2Q9H2M3 363 aa15.76■□□□□ 0.11
RPRD1A-202ENST00000399022 CCT8L1PA6NM43 557 aa15.76■□□□□ 0.11
RPRD1A-202ENST00000399022 AARSP49588 968 aaKnown RBP eCLIP15.76■□□□□ 0.11
RPRD1A-202ENST00000399022 TTBK2Q6IQ55 1244 aa15.76■□□□□ 0.11
RPRD1A-202ENST00000399022 PI4KBQ9UBF8 816 aa15.76■□□□□ 0.11
RPRD1A-202ENST00000399022 USTQ9Y2C2 406 aa15.76■□□□□ 0.11
RPRD1A-202ENST00000399022 UBR1Q8IWV7 1749 aa15.76■□□□□ 0.11
RPRD1A-202ENST00000399022 TCRBV5S4A2TA0A5A2 114 aa15.76■□□□□ 0.11
RPRD1A-202ENST00000399022 SART1O43290 800 aaKnown RBP15.76■□□□□ 0.11
RPRD1A-202ENST00000399022 MIGA2Q7L4E1 593 aa15.76■□□□□ 0.11
RPRD1A-202ENST00000399022 MDM1Q8TC05 714 aa15.76■□□□□ 0.11
RPRD1A-202ENST00000399022 HDAC7Q8WUI4 952 aa15.76■□□□□ 0.11
RPRD1A-202ENST00000399022 RUBCNQ92622 972 aa15.76■□□□□ 0.11
RPRD1A-202ENST00000399022 XPO6Q96QU8 1125 aaKnown RBP15.76■□□□□ 0.11
RPRD1A-202ENST00000399022 NWD1Q149M9 1564 aa15.75■□□□□ 0.11
RPRD1A-202ENST00000399022 K7ENM7 598 aa15.75■□□□□ 0.11
RPRD1A-202ENST00000399022 IFNB1P01574 187 aa15.75■□□□□ 0.11
RPRD1A-202ENST00000399022 ZNF18P17022 549 aa15.75■□□□□ 0.11
RPRD1A-202ENST00000399022 SCTRP47872 440 aa15.75■□□□□ 0.11
RPRD1A-202ENST00000399022 PLCB4Q15147 1175 aa15.75■□□□□ 0.11
RPRD1A-202ENST00000399022 SDCCAG8Q86SQ7 713 aaPredicted RBP15.75■□□□□ 0.11
RPRD1A-202ENST00000399022 MIEF2Q96C03 454 aa15.75■□□□□ 0.11
RPRD1A-202ENST00000399022 RIOK1Q9BRS2 568 aaKnown RBP15.75■□□□□ 0.11
RPRD1A-202ENST00000399022 ANP32DO95626 131 aa15.75■□□□□ 0.11
RPRD1A-202ENST00000399022 FOSP01100 380 aaPredicted RBP15.75■□□□□ 0.11
RPRD1A-202ENST00000399022 GH2P01242 217 aa15.75■□□□□ 0.11
RPRD1A-202ENST00000399022 SNX1Q13596 522 aa15.75■□□□□ 0.11
RPRD1A-202ENST00000399022 LONP2Q86WA8 852 aa15.75■□□□□ 0.11
RPRD1A-202ENST00000399022 ANKRD35Q8N283 1001 aa15.75■□□□□ 0.11
RPRD1A-202ENST00000399022 LBHD1Q9BQE6 289 aaPredicted RBP15.75■□□□□ 0.11
RPRD1A-202ENST00000399022 PPP1R9AQ9ULJ8 1098 aa15.75■□□□□ 0.11
RPRD1A-202ENST00000399022 FER1L4A9Z1Z3 1794 aa15.75■□□□□ 0.11
RPRD1A-202ENST00000399022 POTEB3A0JP26 581 aa15.75■□□□□ 0.11
RPRD1A-202ENST00000399022 POTECB2RU33 542 aa15.75■□□□□ 0.11
RPRD1A-202ENST00000399022 CHN1P15882 459 aa15.75■□□□□ 0.11
RPRD1A-202ENST00000399022 SH3BGRP55822 239 aaPredicted RBP15.75■□□□□ 0.11
RPRD1A-202ENST00000399022 PDE1CQ14123 709 aaPredicted RBP15.75■□□□□ 0.11
RPRD1A-202ENST00000399022 PAPD7Q5XG87 772 aaKnown RBP15.75■□□□□ 0.11
RPRD1A-202ENST00000399022 POTEBQ6S5H4 581 aa15.75■□□□□ 0.11
RPRD1A-202ENST00000399022 NUDCD1Q96RS6 583 aa15.75■□□□□ 0.11
RPRD1A-202ENST00000399022 TDRD3Q9H7E2 651 aaKnown RBP15.75■□□□□ 0.11
RPRD1A-202ENST00000399022 CREB3O43889 395 aa15.74■□□□□ 0.11
RPRD1A-202ENST00000399022 UNC13DQ70J99 1090 aa15.74■□□□□ 0.11
RPRD1A-202ENST00000399022 PIGOQ8TEQ8 1089 aa15.74■□□□□ 0.11
RPRD1A-202ENST00000399022 MON2Q7Z3U7 1717 aa15.74■□□□□ 0.11
RPRD1A-202ENST00000399022 PEAK1Q9H792 1746 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms