RNA–Protein interactions for RNA: ENST00000398545.4

CFAP53-201, Transcript of cilia and flagella associated protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFAP53, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53-201ENST00000398545 MYCBPAPQ8TBZ2 947 aa16.63■□□□□ 0.25
CFAP53-201ENST00000398545 IPO4Q8TEX9 1081 aaKnown RBP16.63■□□□□ 0.25
CFAP53-201ENST00000398545 MKL1Q969V6 931 aa16.63■□□□□ 0.25
CFAP53-201ENST00000398545 CRAMP1Q96RY5 1269 aa16.63■□□□□ 0.25
CFAP53-201ENST00000398545 REEP2Q9BRK0 252 aa16.63■□□□□ 0.25
CFAP53-201ENST00000398545 YY1AP1Q9H869 796 aa16.63■□□□□ 0.25
CFAP53-201ENST00000398545 KANSL2Q9H9L4 492 aa16.63■□□□□ 0.25
CFAP53-201ENST00000398545 SIX2Q9NPC8 291 aa16.63■□□□□ 0.25
CFAP53-201ENST00000398545 FAM114A2Q9NRY5 505 aa16.63■□□□□ 0.25
CFAP53-201ENST00000398545 POLLQ9UGP5 575 aa16.63■□□□□ 0.25
CFAP53-201ENST00000398545 PCDHA1Q9Y5I3 950 aa16.63■□□□□ 0.25
CFAP53-201ENST00000398545 ASTN1O14525 1302 aa16.62■□□□□ 0.25
CFAP53-201ENST00000398545 EIF3DO15371 548 aaKnown RBP eCLIP16.62■□□□□ 0.25
CFAP53-201ENST00000398545 ACTN1P12814 892 aa16.62■□□□□ 0.25
CFAP53-201ENST00000398545 GAP43P17677 238 aa16.62■□□□□ 0.25
CFAP53-201ENST00000398545 GUCY2CP25092 1073 aa16.62■□□□□ 0.25
CFAP53-201ENST00000398545 SLC16A2P36021 539 aa16.62■□□□□ 0.25
CFAP53-201ENST00000398545 CASP5P51878 434 aa16.62■□□□□ 0.25
CFAP53-201ENST00000398545 GTF2A1P52655 376 aaPredicted RBP16.62■□□□□ 0.25
CFAP53-201ENST00000398545 ARHGAP4P98171 946 aa16.62■□□□□ 0.25
CFAP53-201ENST00000398545 PTF1AQ7RTS3 328 aa16.62■□□□□ 0.25
CFAP53-201ENST00000398545 ARMC9Q7Z3E5 817 aa16.62■□□□□ 0.25
CFAP53-201ENST00000398545 RBM46Q8TBY0 533 aaKnown RBP16.62■□□□□ 0.25
CFAP53-201ENST00000398545 SLC35C1Q96A29 364 aa16.62■□□□□ 0.25
CFAP53-201ENST00000398545 MKNK1Q9BUB5 465 aa16.62■□□□□ 0.25
CFAP53-201ENST00000398545 ZHX3Q9H4I2 956 aa16.62■□□□□ 0.25
CFAP53-201ENST00000398545 DDX4Q9NQI0 724 aaKnown RBP16.62■□□□□ 0.25
CFAP53-201ENST00000398545 USP17L15C9J2P7 530 aa16.61■□□□□ 0.25
CFAP53-201ENST00000398545 USP17L13C9JLJ4 530 aa16.61■□□□□ 0.25
CFAP53-201ENST00000398545 USP17L11C9JVI0 530 aa16.61■□□□□ 0.25
CFAP53-201ENST00000398545 USP17L18D6R9N7 530 aa16.61■□□□□ 0.25
CFAP53-201ENST00000398545 USP17L22D6RA61 530 aa16.61■□□□□ 0.25
CFAP53-201ENST00000398545 USP17L17D6RBQ6 530 aa16.61■□□□□ 0.25
CFAP53-201ENST00000398545 USP17L19D6RCP7 530 aa16.61■□□□□ 0.25
CFAP53-201ENST00000398545 USP17L20D6RJB6 530 aa16.61■□□□□ 0.25
CFAP53-201ENST00000398545 KRIT1O00522 736 aa16.61■□□□□ 0.25
CFAP53-201ENST00000398545 NR3C1P04150 777 aa16.61■□□□□ 0.25
CFAP53-201ENST00000398545 PAEPP09466 180 aa16.61■□□□□ 0.25
CFAP53-201ENST00000398545 SPATA31C1P0DKV0 1188 aa16.61■□□□□ 0.25
CFAP53-201ENST00000398545 CTNNA1P35221 906 aaKnown RBP16.61■□□□□ 0.25
CFAP53-201ENST00000398545 USP17L24Q0WX57 530 aa16.61■□□□□ 0.25
CFAP53-201ENST00000398545 ENOX2Q16206 610 aaKnown RBP16.61■□□□□ 0.25
CFAP53-201ENST00000398545 SLC15A2Q16348 729 aa16.61■□□□□ 0.25
CFAP53-201ENST00000398545 USP17L6PQ6QN14 398 aa16.61■□□□□ 0.25
CFAP53-201ENST00000398545 KCTD1Q719H9 257 aa16.61■□□□□ 0.25
CFAP53-201ENST00000398545 KAT2BQ92831 832 aa16.61■□□□□ 0.25
CFAP53-201ENST00000398545 HES6Q96HZ4 224 aa16.61■□□□□ 0.25
CFAP53-201ENST00000398545 CCT8L2Q96SF2 557 aa16.61■□□□□ 0.25
CFAP53-201ENST00000398545 GCNT4Q9P109 453 aa16.61■□□□□ 0.25
CFAP53-201ENST00000398545 NYAP2Q9P242 653 aa16.61■□□□□ 0.25
CFAP53-201ENST00000398545 SLC12A6Q9UHW9 1150 aa16.61■□□□□ 0.25
CFAP53-201ENST00000398545 NRXN2Q9P2S2 1712 aa16.61■□□□□ 0.25
CFAP53-201ENST00000398545 UBE4BO95155 1302 aa16.61■□□□□ 0.25
CFAP53-201ENST00000398545 MEIS2O14770 477 aa16.61■□□□□ 0.25
CFAP53-201ENST00000398545 PPP1R12BO60237 982 aaPredicted RBP16.61■□□□□ 0.25
CFAP53-201ENST00000398545 AKAP3O75969 853 aa16.61■□□□□ 0.25
CFAP53-201ENST00000398545 LMNB1P20700 586 aa16.61■□□□□ 0.25
CFAP53-201ENST00000398545 HOXD13P35453 343 aa16.61■□□□□ 0.25
CFAP53-201ENST00000398545 SREBF1P36956 1147 aa16.61■□□□□ 0.25
CFAP53-201ENST00000398545 STAT1P42224 750 aa16.61■□□□□ 0.25
CFAP53-201ENST00000398545 GTF2IP78347 998 aa16.61■□□□□ 0.25
CFAP53-201ENST00000398545 UAP1Q16222 522 aaPredicted RBP16.61■□□□□ 0.25
CFAP53-201ENST00000398545 NT5DC3Q86UY8 548 aa16.61■□□□□ 0.25
CFAP53-201ENST00000398545 POLR3CQ9BUI4 534 aaPredicted RBP16.61■□□□□ 0.25
CFAP53-201ENST00000398545 ANKRD31Q8N7Z5 1873 aa16.6■□□□□ 0.25
CFAP53-201ENST00000398545 KDM4FA0A1W2PPD8 638 aa16.6■□□□□ 0.25
CFAP53-201ENST00000398545 TMCO5BA8MYB1 307 aa16.6■□□□□ 0.25
CFAP53-201ENST00000398545 TBCAO75347 108 aaKnown RBP16.6■□□□□ 0.25
CFAP53-201ENST00000398545 CIITAP33076 1130 aa16.6■□□□□ 0.25
CFAP53-201ENST00000398545 STAT3P40763 770 aa16.6■□□□□ 0.25
CFAP53-201ENST00000398545 FNTAP49354 379 aa16.6■□□□□ 0.25
CFAP53-201ENST00000398545 MMP14P50281 582 aa16.6■□□□□ 0.25
CFAP53-201ENST00000398545 EIF3BP55884 814 aaKnown RBP16.6■□□□□ 0.25
CFAP53-201ENST00000398545 RNASE9P60153 205 aaKnown RBP16.6■□□□□ 0.25
CFAP53-201ENST00000398545 ZNF844Q08AG5 666 aa16.6■□□□□ 0.25
CFAP53-201ENST00000398545 TRADDQ15628 312 aa16.6■□□□□ 0.25
CFAP53-201ENST00000398545 DCAF17Q5H9S7 520 aaPredicted RBP16.6■□□□□ 0.25
CFAP53-201ENST00000398545 HHIPL2Q6UWX4 724 aa16.6■□□□□ 0.25
CFAP53-201ENST00000398545 RFFLQ8WZ73 363 aa16.6■□□□□ 0.25
CFAP53-201ENST00000398545 NAP1L3Q99457 506 aaPredicted RBP16.6■□□□□ 0.25
CFAP53-201ENST00000398545 RABEP2Q9H5N1 569 aa16.6■□□□□ 0.25
CFAP53-201ENST00000398545 EYA4O95677 639 aa16.59■□□□□ 0.25
CFAP53-201ENST00000398545 TMEM253P0C7T8 217 aa16.59■□□□□ 0.25
CFAP53-201ENST00000398545 CCDC172P0C7W6 258 aa16.59■□□□□ 0.25
CFAP53-201ENST00000398545 PABPC4Q13310 644 aaKnown RBP eCLIP16.59■□□□□ 0.25
CFAP53-201ENST00000398545 SLC30A5Q8TAD4 765 aa16.59■□□□□ 0.25
CFAP53-201ENST00000398545 RAB17Q9H0T7 212 aa16.59■□□□□ 0.25
CFAP53-201ENST00000398545 USP40Q9NVE5 1235 aa16.59■□□□□ 0.25
CFAP53-201ENST00000398545 AMFRQ9UKV5 643 aa16.59■□□□□ 0.25
CFAP53-201ENST00000398545 UTP11Q9Y3A2 253 aaKnown RBP16.59■□□□□ 0.25
CFAP53-201ENST00000398545 C6orf229H3BNL8 230 aa16.59■□□□□ 0.25
CFAP53-201ENST00000398545 MPHOSPH10O00566 681 aaKnown RBP16.59■□□□□ 0.25
CFAP53-201ENST00000398545 DDX3XO00571 662 aaKnown RBP eCLIP16.59■□□□□ 0.25
CFAP53-201ENST00000398545 CDR1P51861 262 aa16.59■□□□□ 0.25
CFAP53-201ENST00000398545 PRR16Q569H4 304 aa16.59■□□□□ 0.25
CFAP53-201ENST00000398545 TCERG1LQ5VWI1 586 aa16.59■□□□□ 0.25
CFAP53-201ENST00000398545 C6orf89Q6UWU4 347 aa16.59■□□□□ 0.25
CFAP53-201ENST00000398545 TMC3Q7Z5M5 1100 aa16.59■□□□□ 0.25
CFAP53-201ENST00000398545 DAAM2Q86T65 1068 aa16.59■□□□□ 0.25
CFAP53-201ENST00000398545 LENG9Q96B70 501 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms