RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 EFCAB8A8MWE9 144 aa12.22□□□□□ -0.45
TTC28-201ENST00000397906 BAG2O95816 211 aa12.22□□□□□ -0.45
TTC28-201ENST00000397906 TMEM62Q0P6H9 643 aa12.22□□□□□ -0.45
TTC28-201ENST00000397906 TRPC7Q9HCX4 862 aa12.22□□□□□ -0.45
TTC28-201ENST00000397906 EIF3CLB5ME19 914 aaKnown RBP12.22□□□□□ -0.45
TTC28-201ENST00000397906 BRD3Q15059 726 aa12.22□□□□□ -0.45
TTC28-201ENST00000397906 C11orf57Q6ZUT1 292 aaPredicted RBP12.22□□□□□ -0.45
TTC28-201ENST00000397906 PDZD8Q8NEN9 1154 aa12.22□□□□□ -0.45
TTC28-201ENST00000397906 FAM167AQ96KS9 214 aa12.22□□□□□ -0.45
TTC28-201ENST00000397906 EIF3CQ99613 913 aaKnown RBP12.22□□□□□ -0.45
TTC28-201ENST00000397906 LBHD1Q9BQE6 289 aaPredicted RBP12.22□□□□□ -0.45
TTC28-201ENST00000397906 ATICP31939 592 aa12.22□□□□□ -0.45
TTC28-201ENST00000397906 KCNJ6P48051 423 aa12.22□□□□□ -0.45
TTC28-201ENST00000397906 DACT3Q96B18 629 aaPredicted RBP12.22□□□□□ -0.45
TTC28-201ENST00000397906 NHEJ1Q9H9Q4 299 aaPredicted RBP12.22□□□□□ -0.45
TTC28-201ENST00000397906 RWDD2AQ9UIY3 292 aa12.22□□□□□ -0.45
TTC28-201ENST00000397906 SOWAHDA6NJG2 315 aa12.22□□□□□ -0.45
TTC28-201ENST00000397906 IFNAR2P48551 515 aa12.22□□□□□ -0.45
TTC28-201ENST00000397906 SMAD1Q15797 465 aaKnown RBP12.22□□□□□ -0.45
TTC28-201ENST00000397906 YAF2Q8IY57 180 aa12.22□□□□□ -0.45
TTC28-201ENST00000397906 TACO1Q9BSH4 297 aaKnown RBP12.22□□□□□ -0.45
TTC28-201ENST00000397906 FSD1LQ9BXM9 530 aa12.22□□□□□ -0.45
TTC28-201ENST00000397906 E9PMD0 336 aa12.22□□□□□ -0.45
TTC28-201ENST00000397906 ECEL1O95672 775 aa12.22□□□□□ -0.45
TTC28-201ENST00000397906 IGKV5-2P06315 115 aa12.22□□□□□ -0.45
TTC28-201ENST00000397906 PADI6Q6TGC4 694 aa12.22□□□□□ -0.45
TTC28-201ENST00000397906 LARGE1O95461 756 aa12.22□□□□□ -0.45
TTC28-201ENST00000397906 C6orf222P0C671 652 aaPredicted RBP12.22□□□□□ -0.45
TTC28-201ENST00000397906 SERPINB6P35237 376 aa12.22□□□□□ -0.45
TTC28-201ENST00000397906 DBN1Q16643 649 aa12.22□□□□□ -0.45
TTC28-201ENST00000397906 SP8Q8IXZ3 490 aa12.22□□□□□ -0.45
TTC28-201ENST00000397906 ACAD9Q9H845 621 aa12.22□□□□□ -0.45
TTC28-201ENST00000397906 HPCAL4Q9UM19 191 aa12.22□□□□□ -0.45
TTC28-201ENST00000397906 SFR1Q86XK3 245 aa12.22□□□□□ -0.45
TTC28-201ENST00000397906 BBOF1Q8ND07 529 aa12.22□□□□□ -0.45
TTC28-201ENST00000397906 NRBP1Q9UHY1 535 aa12.22□□□□□ -0.45
TTC28-201ENST00000397906 ZBED1O96006 694 aa12.21□□□□□ -0.45
TTC28-201ENST00000397906 IFNAR1P17181 557 aa12.21□□□□□ -0.45
TTC28-201ENST00000397906 IRX4P78413 519 aa12.21□□□□□ -0.45
TTC28-201ENST00000397906 PCGF5Q86SE9 256 aa12.21□□□□□ -0.45
TTC28-201ENST00000397906 SLC35F6Q8N357 371 aa12.21□□□□□ -0.45
TTC28-201ENST00000397906 ACRBPQ8NEB7 543 aa12.21□□□□□ -0.45
TTC28-201ENST00000397906 BEST2Q8NFU1 509 aa12.21□□□□□ -0.45
TTC28-201ENST00000397906 TMEM270Q6UE05 265 aa12.21□□□□□ -0.45
TTC28-201ENST00000397906 NUDCD1Q96RS6 583 aa12.21□□□□□ -0.45
TTC28-201ENST00000397906 DNAJC17Q9NVM6 304 aaKnown RBP12.21□□□□□ -0.45
TTC28-201ENST00000397906 GGA3Q9NZ52 723 aa12.21□□□□□ -0.45
TTC28-201ENST00000397906 POTEFA5A3E0 1075 aa12.21□□□□□ -0.45
TTC28-201ENST00000397906 POTEIP0CG38 1075 aa12.21□□□□□ -0.45
TTC28-201ENST00000397906 TCP1P17987 556 aaKnown RBP12.21□□□□□ -0.45
TTC28-201ENST00000397906 COPB2P35606 906 aa12.21□□□□□ -0.45
TTC28-201ENST00000397906 SLCO1A2P46721 670 aa12.21□□□□□ -0.45
TTC28-201ENST00000397906 GCLMP48507 274 aa12.21□□□□□ -0.45
TTC28-201ENST00000397906 POTEGQ6S5H5 508 aa12.21□□□□□ -0.45
TTC28-201ENST00000397906 POTEEQ6S8J3 1075 aa12.21□□□□□ -0.45
TTC28-201ENST00000397906 STAG1Q8WVM7 1258 aa12.21□□□□□ -0.45
TTC28-201ENST00000397906 IFT43Q96FT9 208 aa12.21□□□□□ -0.45
TTC28-201ENST00000397906 HAUS4Q9H6D7 363 aa12.21□□□□□ -0.45
TTC28-201ENST00000397906 TLK1Q9UKI8 766 aa12.21□□□□□ -0.45
TTC28-201ENST00000397906 TET3O43151 1660 aa12.21□□□□□ -0.45
TTC28-201ENST00000397906 PIK3R2O00459 728 aa12.21□□□□□ -0.45
TTC28-201ENST00000397906 TNFAIP2Q03169 654 aa12.21□□□□□ -0.45
TTC28-201ENST00000397906 SRPRBQ9Y5M8 271 aaKnown RBP12.21□□□□□ -0.45
TTC28-201ENST00000397906 ERCC6L2Q5T890 1561 aa12.21□□□□□ -0.46
TTC28-201ENST00000397906 MSH2P43246 934 aa12.21□□□□□ -0.46
TTC28-201ENST00000397906 PSPC1Q8WXF1 523 aaKnown RBP12.21□□□□□ -0.46
TTC28-201ENST00000397906 FRA10AC1Q70Z53 315 aa12.21□□□□□ -0.46
TTC28-201ENST00000397906 ATP8A1Q9Y2Q0 1164 aa12.21□□□□□ -0.46
TTC28-201ENST00000397906 F5H6K3 240 aa12.21□□□□□ -0.46
TTC28-201ENST00000397906 KLRC3Q07444 240 aa12.21□□□□□ -0.46
TTC28-201ENST00000397906 SCARF1Q14162 830 aa12.21□□□□□ -0.46
TTC28-201ENST00000397906 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.21□□□□□ -0.46
TTC28-201ENST00000397906 SAAL1Q96ER3 474 aa12.21□□□□□ -0.46
TTC28-201ENST00000397906 FGD4Q96M96 766 aa12.21□□□□□ -0.46
TTC28-201ENST00000397906 SARS2Q9NP81 518 aaKnown RBP12.21□□□□□ -0.46
TTC28-201ENST00000397906 SH3GLB2Q9NR46 395 aa12.21□□□□□ -0.46
TTC28-201ENST00000397906 G3BP2Q9UN86 482 aaKnown RBP12.21□□□□□ -0.46
TTC28-201ENST00000397906 HEY1Q9Y5J3 304 aa12.21□□□□□ -0.46
TTC28-201ENST00000397906 POTEB3A0JP26 581 aa12.21□□□□□ -0.46
TTC28-201ENST00000397906 POTECB2RU33 542 aa12.21□□□□□ -0.46
TTC28-201ENST00000397906 SLFN14P0C7P3 912 aa12.21□□□□□ -0.46
TTC28-201ENST00000397906 POTEBQ6S5H4 581 aa12.21□□□□□ -0.46
TTC28-201ENST00000397906 GBP7Q8N8V2 638 aaPredicted RBP12.21□□□□□ -0.46
TTC28-201ENST00000397906 LXNQ9BS40 222 aa12.21□□□□□ -0.46
TTC28-201ENST00000397906 JCADQ9P266 1359 aa12.21□□□□□ -0.46
TTC28-201ENST00000397906 ARHGAP31Q2M1Z3 1444 aa12.21□□□□□ -0.46
TTC28-201ENST00000397906 CASP1P29466 404 aa12.2□□□□□ -0.46
TTC28-201ENST00000397906 YWHAHQ04917 246 aaPredicted RBP12.2□□□□□ -0.46
TTC28-201ENST00000397906 PPP2R5EQ16537 467 aa12.2□□□□□ -0.46
TTC28-201ENST00000397906 LRGUKQ96M69 825 aa12.2□□□□□ -0.46
TTC28-201ENST00000397906 PIN4Q9Y237 131 aaKnown RBP12.2□□□□□ -0.46
TTC28-201ENST00000397906 TOM1L1O75674 476 aa12.2□□□□□ -0.46
TTC28-201ENST00000397906 CELF2O95319 508 aaKnown RBP12.2□□□□□ -0.46
TTC28-201ENST00000397906 EIF4A3P38919 411 aaKnown RBP12.2□□□□□ -0.46
TTC28-201ENST00000397906 GLI2P10070 1586 aa12.2□□□□□ -0.46
TTC28-201ENST00000397906 CYP2B6P20813 491 aa12.2□□□□□ -0.46
TTC28-201ENST00000397906 SLMAPQ14BN4 828 aa12.2□□□□□ -0.46
TTC28-201ENST00000397906 RNF10Q8N5U6 811 aaKnown RBP12.2□□□□□ -0.46
TTC28-201ENST00000397906 ENAHQ8N8S7 591 aaPredicted RBP12.2□□□□□ -0.46
TTC28-201ENST00000397906 ALCAMQ13740 583 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms