RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 PDE6CP51160 858 aa7.65□□□□□ -1.18
SMCO1-201ENST00000397537 CACNB3P54284 484 aa7.65□□□□□ -1.18
SMCO1-201ENST00000397537 OCRLQ01968 901 aa7.65□□□□□ -1.18
SMCO1-201ENST00000397537 CLEC16AQ2KHT3 1053 aa7.65□□□□□ -1.18
SMCO1-201ENST00000397537 C4orf17Q53FE4 359 aa7.65□□□□□ -1.18
SMCO1-201ENST00000397537 JMJD6Q6NYC1 403 aaPredicted RBP7.65□□□□□ -1.18
SMCO1-201ENST00000397537 GALNTL5Q7Z4T8 443 aa7.65□□□□□ -1.18
SMCO1-201ENST00000397537 SDCCAG8Q86SQ7 713 aaPredicted RBP7.65□□□□□ -1.18
SMCO1-201ENST00000397537 NBPF5PQ86XG9 351 aaPredicted RBP7.65□□□□□ -1.18
SMCO1-201ENST00000397537 DZIP1LQ8IYY4 767 aaKnown RBP7.65□□□□□ -1.18
SMCO1-201ENST00000397537 RRP36Q96EU6 259 aaKnown RBP7.65□□□□□ -1.18
SMCO1-201ENST00000397537 C1GALT1C1Q96EU7 318 aa7.65□□□□□ -1.18
SMCO1-201ENST00000397537 MVB12AQ96EY5 273 aa7.65□□□□□ -1.18
SMCO1-201ENST00000397537 MRGPRX3Q96LB0 322 aa7.65□□□□□ -1.18
SMCO1-201ENST00000397537 JAKMIP1Q96N16 626 aaKnown RBP7.65□□□□□ -1.18
SMCO1-201ENST00000397537 GPATCH1Q9BRR8 931 aaKnown RBP7.65□□□□□ -1.18
SMCO1-201ENST00000397537 UNKQ9C0B0 810 aaKnown RBP7.65□□□□□ -1.18
SMCO1-201ENST00000397537 KLHL25Q9H0H3 589 aa7.65□□□□□ -1.18
SMCO1-201ENST00000397537 CYP26B1Q9NR63 512 aa7.65□□□□□ -1.18
SMCO1-201ENST00000397537 ZNF277Q9NRM2 450 aaPredicted RBP7.65□□□□□ -1.18
SMCO1-201ENST00000397537 DIAPH3Q9NSV4 1193 aa7.65□□□□□ -1.18
SMCO1-201ENST00000397537 CCM2LQ9NUG4 571 aaPredicted RBP7.65□□□□□ -1.18
SMCO1-201ENST00000397537 ZSWIM5Q9P217 1185 aa7.65□□□□□ -1.18
SMCO1-201ENST00000397537 WDR35Q9P2L0 1181 aa7.65□□□□□ -1.18
SMCO1-201ENST00000397537 LRP5O75197 1615 aa7.65□□□□□ -1.19
SMCO1-201ENST00000397537 ABCA6Q8N139 1617 aa7.65□□□□□ -1.19
SMCO1-201ENST00000397537 APOA4P06727 396 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 C5AR1P21730 350 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 ARNTP27540 789 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 ACTN2P35609 894 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 YARSP54577 528 aaKnown RBP7.64□□□□□ -1.19
SMCO1-201ENST00000397537 SCARB2Q14108 478 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 KRT32Q14532 448 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 STARD3Q14849 445 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 BBS9Q3SYG4 887 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 CREB3L3Q68CJ9 461 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 SLC30A6Q6NXT4 461 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 KDELC2Q7Z4H8 507 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 SYTL1Q8IYJ3 562 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 NANOS1Q8WY41 292 aaKnown RBP7.64□□□□□ -1.19
SMCO1-201ENST00000397537 LRTOMTQ8WZ04 291 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 NXPE3Q969Y0 559 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 KCTD12Q96CX2 325 aaKnown RBP7.64□□□□□ -1.19
SMCO1-201ENST00000397537 GMCL1Q96IK5 515 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 SLF1Q9BQI6 1058 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 SLC6A16Q9GZN6 736 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 GHITMQ9H3K2 345 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 STARD7Q9NQZ5 370 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 WBP1LQ9NX94 342 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 MTRRQ9UBK8 725 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 B4GALT6Q9UBX8 382 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 TBC1D29Q9UFV1 150 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 CTTNBP2Q8WZ74 1663 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 MED14O60244 1454 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 JCADQ9P266 1359 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 FOXN3O00409 490 aaPredicted RBP7.64□□□□□ -1.19
SMCO1-201ENST00000397537 PPEF1O14829 653 aaPredicted RBP7.64□□□□□ -1.19
SMCO1-201ENST00000397537 FFAR2O15552 330 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 HOXC11O43248 304 aaPredicted RBP7.64□□□□□ -1.19
SMCO1-201ENST00000397537 TGM5O43548 720 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 AOC2O75106 756 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 HNRNPLP14866 589 aaKnown RBP eCLIP7.64□□□□□ -1.19
SMCO1-201ENST00000397537 ITGA6P23229 1130 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 YY1P25490 414 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 CD86P42081 329 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 SEPHS1P49903 392 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 ADKP55263 362 aaKnown RBP7.64□□□□□ -1.19
SMCO1-201ENST00000397537 UBXN2AP68543 259 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 TATDN1Q6P1N9 297 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 LMBR1LQ6UX01 489 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 TMEM192Q8IY95 271 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 FAM13CQ8NE31 585 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 BVESQ8NE79 360 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 ZMIZ2Q8NF64 920 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 ASAP3Q8TDY4 903 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 TRIM11Q96F44 468 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 LTV1Q96GA3 475 aaPredicted RBP7.64□□□□□ -1.19
SMCO1-201ENST00000397537 NLRP3Q96P20 1036 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 TXLNGYQ9BZA5 131 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 PRDM6Q9NQX0 595 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 BLOC1S6Q9UL45 172 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 MKL2Q9ULH7 1088 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 RAPGEF6Q8TEU7 1601 aa7.64□□□□□ -1.19
SMCO1-201ENST00000397537 CDK13Q14004 1512 aaKnown RBP7.63□□□□□ -1.19
SMCO1-201ENST00000397537 NPHP4O75161 1426 aaPredicted RBP7.63□□□□□ -1.19
SMCO1-201ENST00000397537 LRP6O75581 1613 aa7.63□□□□□ -1.19
SMCO1-201ENST00000397537 FGF18O76093 207 aa7.63□□□□□ -1.19
SMCO1-201ENST00000397537 ALDH2P05091 517 aa7.63□□□□□ -1.19
SMCO1-201ENST00000397537 NR3C2P08235 984 aa7.63□□□□□ -1.19
SMCO1-201ENST00000397537 MYCLP12524 364 aaPredicted RBP7.63□□□□□ -1.19
SMCO1-201ENST00000397537 RPL17P18621 184 aaKnown RBP7.63□□□□□ -1.19
SMCO1-201ENST00000397537 TARSP26639 723 aaKnown RBP7.63□□□□□ -1.19
SMCO1-201ENST00000397537 CASQ1P31415 396 aa7.63□□□□□ -1.19
SMCO1-201ENST00000397537 AGFG1P52594 562 aaKnown RBP7.63□□□□□ -1.19
SMCO1-201ENST00000397537 ZNF543Q08ER8 600 aa7.63□□□□□ -1.19
SMCO1-201ENST00000397537 APOA5Q6Q788 366 aa7.63□□□□□ -1.19
SMCO1-201ENST00000397537 BICDL1Q6ZP65 573 aa7.63□□□□□ -1.19
SMCO1-201ENST00000397537 RTKN2Q8IZC4 609 aa7.63□□□□□ -1.19
SMCO1-201ENST00000397537 SLC6A18Q96N87 628 aa7.63□□□□□ -1.19
SMCO1-201ENST00000397537 NCAPGQ9BPX3 1015 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 174 ms