RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 HBP1O60381 514 aa26.2■■□□□ 1.79
TSPAN4-202ENST00000397396 C6orf222P0C671 652 aaPredicted RBP26.2■■□□□ 1.79
TSPAN4-202ENST00000397396 CCDC192P0DO97 292 aa26.2■■□□□ 1.79
TSPAN4-202ENST00000397396 ZNF445P59923 1031 aa26.2■■□□□ 1.79
TSPAN4-202ENST00000397396 CUL4BQ13620 913 aa26.2■■□□□ 1.79
TSPAN4-202ENST00000397396 LENG1Q96BZ8 264 aaPredicted RBP26.2■■□□□ 1.79
TSPAN4-202ENST00000397396 BLZF1Q9H2G9 400 aa26.2■■□□□ 1.79
TSPAN4-202ENST00000397396 CYP26B1Q9NR63 512 aa26.2■■□□□ 1.79
TSPAN4-202ENST00000397396 ODF2LQ9ULJ1 636 aa26.2■■□□□ 1.79
TSPAN4-202ENST00000397396 DGAT1O75907 488 aa26.19■■□□□ 1.78
TSPAN4-202ENST00000397396 STBD1O95210 358 aa26.19■■□□□ 1.78
TSPAN4-202ENST00000397396 RPN1P04843 607 aaKnown RBP26.19■■□□□ 1.78
TSPAN4-202ENST00000397396 PTGS1P23219 599 aa26.19■■□□□ 1.78
TSPAN4-202ENST00000397396 GUCY2CP25092 1073 aa26.19■■□□□ 1.78
TSPAN4-202ENST00000397396 CST5P28325 142 aaPredicted RBP26.19■■□□□ 1.78
TSPAN4-202ENST00000397396 RFC5P40937 340 aa26.19■■□□□ 1.78
TSPAN4-202ENST00000397396 KCNB1Q14721 858 aa26.19■■□□□ 1.78
TSPAN4-202ENST00000397396 RINT1Q6NUQ1 792 aa26.19■■□□□ 1.78
TSPAN4-202ENST00000397396 PADI6Q6TGC4 694 aa26.19■■□□□ 1.78
TSPAN4-202ENST00000397396 UNC13DQ70J99 1090 aa26.19■■□□□ 1.78
TSPAN4-202ENST00000397396 TRIM50Q86XT4 487 aa26.19■■□□□ 1.78
TSPAN4-202ENST00000397396 CCDC65Q8IXS2 484 aa26.19■■□□□ 1.78
TSPAN4-202ENST00000397396 C16orf70Q9BSU1 422 aa26.19■■□□□ 1.78
TSPAN4-202ENST00000397396 TRPC6Q9Y210 931 aa26.19■■□□□ 1.78
TSPAN4-202ENST00000397396 COL1A2P08123 1366 aa26.19■■□□□ 1.78
TSPAN4-202ENST00000397396 H3BRB1 525 aa26.18■■□□□ 1.78
TSPAN4-202ENST00000397396 TBCAO75347 108 aaKnown RBP26.18■■□□□ 1.78
TSPAN4-202ENST00000397396 F2P00734 622 aa26.18■■□□□ 1.78
TSPAN4-202ENST00000397396 ATP4AP20648 1035 aa26.18■■□□□ 1.78
TSPAN4-202ENST00000397396 SARSP49591 514 aaKnown RBP26.18■■□□□ 1.78
TSPAN4-202ENST00000397396 LBX1P52954 281 aa26.18■■□□□ 1.78
TSPAN4-202ENST00000397396 PLCB4Q15147 1175 aa26.18■■□□□ 1.78
TSPAN4-202ENST00000397396 FBXO46Q6PJ61 603 aaPredicted RBP26.18■■□□□ 1.78
TSPAN4-202ENST00000397396 C1orf186Q6ZWK4 172 aa26.18■■□□□ 1.78
TSPAN4-202ENST00000397396 MCPH1Q8NEM0 835 aa26.18■■□□□ 1.78
TSPAN4-202ENST00000397396 JPH2Q9BR39 696 aaPredicted RBP26.18■■□□□ 1.78
TSPAN4-202ENST00000397396 TUT1Q9H6E5 874 aaKnown RBP26.18■■□□□ 1.78
TSPAN4-202ENST00000397396 EXOC1Q9NV70 894 aa26.18■■□□□ 1.78
TSPAN4-202ENST00000397396 A0A087WWV3 80 aa26.17■■□□□ 1.78
TSPAN4-202ENST00000397396 ZBTB39O15060 712 aa26.17■■□□□ 1.78
TSPAN4-202ENST00000397396 ZNF286BP0CG31 522 aa26.17■■□□□ 1.78
TSPAN4-202ENST00000397396 PLA2G4FQ68DD2 849 aa26.17■■□□□ 1.78
TSPAN4-202ENST00000397396 DYMQ7RTS9 669 aa26.17■■□□□ 1.78
TSPAN4-202ENST00000397396 RNF180Q86T96 592 aa26.17■■□□□ 1.78
TSPAN4-202ENST00000397396 PCSK9Q8NBP7 692 aaKnown RBP26.17■■□□□ 1.78
TSPAN4-202ENST00000397396 GAS2O43903 313 aaKnown RBP26.16■■□□□ 1.78
TSPAN4-202ENST00000397396 ADAMTS4O75173 837 aa26.16■■□□□ 1.78
TSPAN4-202ENST00000397396 MARK3P27448 753 aa26.16■■□□□ 1.78
TSPAN4-202ENST00000397396 STX1AQ16623 288 aa26.16■■□□□ 1.78
TSPAN4-202ENST00000397396 ZNF484Q5JVG2 852 aa26.16■■□□□ 1.78
TSPAN4-202ENST00000397396 GNASQ5JWF2 1037 aa26.16■■□□□ 1.78
TSPAN4-202ENST00000397396 LRSAM1Q6UWE0 723 aa26.16■■□□□ 1.78
TSPAN4-202ENST00000397396 SH3TC2Q8TF17 1288 aa26.16■■□□□ 1.78
TSPAN4-202ENST00000397396 SLC7A3Q8WY07 619 aa26.16■■□□□ 1.78
TSPAN4-202ENST00000397396 DNAJC19Q96DA6 116 aa26.16■■□□□ 1.78
TSPAN4-202ENST00000397396 DRC1Q96MC2 740 aa26.16■■□□□ 1.78
TSPAN4-202ENST00000397396 RUSC1Q9BVN2 902 aa26.16■■□□□ 1.78
TSPAN4-202ENST00000397396 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.16■■□□□ 1.782e-6■■■■□ 22.9
TSPAN4-202ENST00000397396 ATP6V0A4Q9HBG4 840 aa26.16■■□□□ 1.78
TSPAN4-202ENST00000397396 ANO10Q9NW15 660 aa26.16■■□□□ 1.78
TSPAN4-202ENST00000397396 COL4A3BPQ9Y5P4 624 aa26.16■■□□□ 1.78
TSPAN4-202ENST00000397396 USO1O60763 962 aaKnown RBP26.15■■□□□ 1.78
TSPAN4-202ENST00000397396 RHOBTB3O94955 611 aa26.15■■□□□ 1.78
TSPAN4-202ENST00000397396 MYL3P08590 195 aa26.15■■□□□ 1.78
TSPAN4-202ENST00000397396 IDEP14735 1019 aa26.15■■□□□ 1.78
TSPAN4-202ENST00000397396 GAP43P17677 238 aa26.15■■□□□ 1.78
TSPAN4-202ENST00000397396 POLGP54098 1239 aaPredicted RBP26.15■■□□□ 1.78
TSPAN4-202ENST00000397396 NPEPPSP55786 919 aa26.15■■□□□ 1.78
TSPAN4-202ENST00000397396 MTERF2Q49AM1 385 aa26.15■■□□□ 1.78
TSPAN4-202ENST00000397396 ARSHQ5FYA8 562 aa26.15■■□□□ 1.78
TSPAN4-202ENST00000397396 TRMT1LQ7Z2T5 733 aaKnown RBP26.15■■□□□ 1.78
TSPAN4-202ENST00000397396 ERCC4Q92889 916 aaPredicted RBP26.15■■□□□ 1.78
TSPAN4-202ENST00000397396 REEP2Q9BRK0 252 aa26.15■■□□□ 1.78
TSPAN4-202ENST00000397396 SEL1LQ9UBV2 794 aa26.15■■□□□ 1.78
TSPAN4-202ENST00000397396 DACH1Q9UI36 760 aa26.15■■□□□ 1.78
TSPAN4-202ENST00000397396 FAM13AO94988 1023 aa26.14■■□□□ 1.78
TSPAN4-202ENST00000397396 PGK1P00558 417 aa26.14■■□□□ 1.78
TSPAN4-202ENST00000397396 CASP1P29466 404 aa26.14■■□□□ 1.78
TSPAN4-202ENST00000397396 PURAQ00577 322 aaKnown RBP26.14■■□□□ 1.78
TSPAN4-202ENST00000397396 TYRO3Q06418 890 aa26.14■■□□□ 1.78
TSPAN4-202ENST00000397396 PSMD2Q13200 908 aa26.14■■□□□ 1.78
TSPAN4-202ENST00000397396 GIT2Q14161 759 aa26.14■■□□□ 1.78
TSPAN4-202ENST00000397396 TARBP2Q15633 366 aaKnown RBP26.14■■□□□ 1.78
TSPAN4-202ENST00000397396 MTG1Q9BT17 334 aaPredicted RBP26.14■■□□□ 1.78
TSPAN4-202ENST00000397396 PANK4Q9NVE7 773 aa26.14■■□□□ 1.78
TSPAN4-202ENST00000397396 MAN1B1Q9UKM7 699 aa26.14■■□□□ 1.78
TSPAN4-202ENST00000397396 FRMD3A2A2Y4 597 aa26.14■■□□□ 1.77
TSPAN4-202ENST00000397396 KLRC4O43908 158 aa26.14■■□□□ 1.77
TSPAN4-202ENST00000397396 CAVIN2O95810 425 aa26.14■■□□□ 1.77
TSPAN4-202ENST00000397396 PPP1R2P41236 205 aa26.14■■□□□ 1.77
TSPAN4-202ENST00000397396 NLRP12P59046 1061 aa26.14■■□□□ 1.77
TSPAN4-202ENST00000397396 BEX3Q00994 111 aa26.14■■□□□ 1.77
TSPAN4-202ENST00000397396 TBC1D8BQ0IIM8 1120 aa26.14■■□□□ 1.77
TSPAN4-202ENST00000397396 KLHDC9Q8NEP7 349 aa26.14■■□□□ 1.77
TSPAN4-202ENST00000397396 KIFAP3Q92845 792 aa26.14■■□□□ 1.77
TSPAN4-202ENST00000397396 KCNG1Q9UIX4 513 aa26.14■■□□□ 1.77
TSPAN4-202ENST00000397396 ARID2Q68CP9 1835 aa26.13■■□□□ 1.77
TSPAN4-202ENST00000397396 TMEM150BA6NC51 233 aa26.13■■□□□ 1.77
TSPAN4-202ENST00000397396 RRN3P2A6NIE6 340 aa26.13■■□□□ 1.77
TSPAN4-202ENST00000397396 CABYRO75952 493 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms