RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 FNDC1Q4ZHG4 1894 aaPredicted RBP10.89□□□□□ -0.67
NEDD9-203ENST00000397378 FRMPD4Q14CM0 1322 aa10.88□□□□□ -0.67
NEDD9-203ENST00000397378 NRCAMQ92823 1304 aa10.88□□□□□ -0.67
NEDD9-203ENST00000397378 TBKBP1A7MCY6 615 aa10.88□□□□□ -0.67
NEDD9-203ENST00000397378 TRIM6-TRIM34B2RNG4 842 aa10.88□□□□□ -0.67
NEDD9-203ENST00000397378 KLRF2D3W0D1 207 aa10.88□□□□□ -0.67
NEDD9-203ENST00000397378 GCOM1H8Y6P7 765 aaPredicted RBP10.88□□□□□ -0.67
NEDD9-203ENST00000397378 DCNP07585 359 aaKnown RBP10.88□□□□□ -0.67
NEDD9-203ENST00000397378 POLR2MP0CAP2 368 aa10.88□□□□□ -0.67
NEDD9-203ENST00000397378 KCNA4P22459 653 aa10.88□□□□□ -0.67
NEDD9-203ENST00000397378 CA8P35219 290 aa10.88□□□□□ -0.67
NEDD9-203ENST00000397378 ATAT1Q5SQI0 421 aa10.88□□□□□ -0.67
NEDD9-203ENST00000397378 ANKRD45Q5TZF3 282 aa10.88□□□□□ -0.67
NEDD9-203ENST00000397378 KIAA1841Q6NSI8 718 aa10.88□□□□□ -0.67
NEDD9-203ENST00000397378 TAF2Q6P1X5 1199 aa10.88□□□□□ -0.67
NEDD9-203ENST00000397378 XRRA1Q6P2D8 792 aa10.88□□□□□ -0.67
NEDD9-203ENST00000397378 RTN4RL1Q86UN2 441 aaPredicted RBP10.88□□□□□ -0.67
NEDD9-203ENST00000397378 TRIM50Q86XT4 487 aa10.88□□□□□ -0.67
NEDD9-203ENST00000397378 C1orf210Q8IVY1 113 aa10.88□□□□□ -0.67
NEDD9-203ENST00000397378 COLGALT1Q8NBJ5 622 aa10.88□□□□□ -0.67
NEDD9-203ENST00000397378 MRPS27Q92552 414 aaKnown RBP10.88□□□□□ -0.67
NEDD9-203ENST00000397378 ACSF2Q96CM8 615 aaPredicted RBP10.88□□□□□ -0.67
NEDD9-203ENST00000397378 NGRNQ9NPE2 291 aaKnown RBP10.88□□□□□ -0.67
NEDD9-203ENST00000397378 HCSTQ9UBK5 93 aa10.88□□□□□ -0.67
NEDD9-203ENST00000397378 FAM208BQ5VWN6 2430 aa10.88□□□□□ -0.67
NEDD9-203ENST00000397378 DENND4AQ7Z401 1863 aa10.87□□□□□ -0.67
NEDD9-203ENST00000397378 KRBA1A5PL33 1030 aa10.87□□□□□ -0.67
NEDD9-203ENST00000397378 PALM3A6NDB9 673 aaPredicted RBP10.87□□□□□ -0.67
NEDD9-203ENST00000397378 SPATA31C2B4DYI2 1134 aa10.87□□□□□ -0.67
NEDD9-203ENST00000397378 NARSO43776 548 aaKnown RBP10.87□□□□□ -0.67
NEDD9-203ENST00000397378 MRPS9P82933 396 aaKnown RBP10.87□□□□□ -0.67
NEDD9-203ENST00000397378 SEMA3FQ13275 785 aa10.87□□□□□ -0.67
NEDD9-203ENST00000397378 UTP14CQ5TAP6 766 aaKnown RBP10.87□□□□□ -0.67
NEDD9-203ENST00000397378 CYFIP1Q7L576 1253 aa10.87□□□□□ -0.67
NEDD9-203ENST00000397378 TMC7Q7Z402 723 aa10.87□□□□□ -0.67
NEDD9-203ENST00000397378 C12orf76Q8N812 135 aaPredicted RBP10.87□□□□□ -0.67
NEDD9-203ENST00000397378 DNAJB3Q8WWF6 145 aa10.87□□□□□ -0.67
NEDD9-203ENST00000397378 ZFP91Q96JP5 570 aaPredicted RBP10.87□□□□□ -0.67
NEDD9-203ENST00000397378 SENP7Q9BQF6 1050 aa10.87□□□□□ -0.67
NEDD9-203ENST00000397378 KRT23Q9C075 422 aa10.87□□□□□ -0.67
NEDD9-203ENST00000397378 TBC1D17Q9HA65 648 aa10.87□□□□□ -0.67
NEDD9-203ENST00000397378 MAD2L2Q9UI95 211 aa10.87□□□□□ -0.67
NEDD9-203ENST00000397378 CA14Q9ULX7 337 aa10.87□□□□□ -0.67
NEDD9-203ENST00000397378 LZTS1Q9Y250 596 aa10.87□□□□□ -0.67
NEDD9-203ENST00000397378 PCDHB7Q9Y5E2 793 aa10.87□□□□□ -0.67
NEDD9-203ENST00000397378 FIBPO43427 364 aa10.86□□□□□ -0.67
NEDD9-203ENST00000397378 SDSP20132 328 aa10.86□□□□□ -0.67
NEDD9-203ENST00000397378 PAK2Q13177 524 aa10.86□□□□□ -0.67
NEDD9-203ENST00000397378 SEC23AQ15436 765 aa10.86□□□□□ -0.67
NEDD9-203ENST00000397378 IFIT1BQ5T764 474 aaKnown RBP10.86□□□□□ -0.67
NEDD9-203ENST00000397378 KANK3Q6NY19 840 aa10.86□□□□□ -0.67
NEDD9-203ENST00000397378 FCHSD1Q86WN1 690 aa10.86□□□□□ -0.67
NEDD9-203ENST00000397378 UBAC1Q9BSL1 405 aa10.86□□□□□ -0.67
NEDD9-203ENST00000397378 RIOX1Q9H6W3 641 aa10.86□□□□□ -0.67
NEDD9-203ENST00000397378 CNNM2Q9H8M5 875 aa10.86□□□□□ -0.67
NEDD9-203ENST00000397378 KCNK12Q9HB15 430 aa10.86□□□□□ -0.67
NEDD9-203ENST00000397378 TYW1Q9NV66 732 aaKnown RBP10.86□□□□□ -0.67
NEDD9-203ENST00000397378 SIT1Q9Y3P8 196 aa10.86□□□□□ -0.67
NEDD9-203ENST00000397378 SQORQ9Y6N5 450 aa10.86□□□□□ -0.67
NEDD9-203ENST00000397378 EVPLQ92817 2033 aa10.85□□□□□ -0.67
NEDD9-203ENST00000397378 MBLAC1A4D2B0 266 aaPredicted RBP10.85□□□□□ -0.67
NEDD9-203ENST00000397378 M0QZ92 97 aa10.85□□□□□ -0.67
NEDD9-203ENST00000397378 RPLP2P05387 115 aaKnown RBP10.85□□□□□ -0.67
NEDD9-203ENST00000397378 LAG3P18627 525 aa10.85□□□□□ -0.67
NEDD9-203ENST00000397378 SARSP49591 514 aaKnown RBP10.85□□□□□ -0.67
NEDD9-203ENST00000397378 MRPS6P82932 125 aaKnown RBP10.85□□□□□ -0.67
NEDD9-203ENST00000397378 PLCB3Q01970 1234 aa10.85□□□□□ -0.67
NEDD9-203ENST00000397378 SMC1AQ14683 1233 aaKnown RBP10.85□□□□□ -0.67
NEDD9-203ENST00000397378 IMMTQ16891 758 aaKnown RBP10.85□□□□□ -0.67
NEDD9-203ENST00000397378 SLC35G1Q2M3R5 365 aa10.85□□□□□ -0.67
NEDD9-203ENST00000397378 CCDC149Q6ZUS6 474 aa10.85□□□□□ -0.67
NEDD9-203ENST00000397378 OTOP3Q7RTS5 596 aa10.85□□□□□ -0.67
NEDD9-203ENST00000397378 RILPL2Q969X0 211 aa10.85□□□□□ -0.67
NEDD9-203ENST00000397378 DSCC1Q9BVC3 393 aa10.85□□□□□ -0.67
NEDD9-203ENST00000397378 WNT16Q9UBV4 365 aa10.85□□□□□ -0.67
NEDD9-203ENST00000397378 TUBE1Q9UJT0 475 aa10.85□□□□□ -0.67
NEDD9-203ENST00000397378 ANGPTL2Q9UKU9 493 aa10.85□□□□□ -0.67
NEDD9-203ENST00000397378 PADI3Q9ULW8 664 aa10.85□□□□□ -0.67
NEDD9-203ENST00000397378 PNMA6FA0A0J9YX94 578 aa10.84□□□□□ -0.67
NEDD9-203ENST00000397378 POTEMA6NI47 508 aa10.84□□□□□ -0.67
NEDD9-203ENST00000397378 SPDYE4A6NLX3 237 aa10.84□□□□□ -0.67
NEDD9-203ENST00000397378 SPTLC1O15269 473 aa10.84□□□□□ -0.67
NEDD9-203ENST00000397378 SP4Q02446 784 aa10.84□□□□□ -0.67
NEDD9-203ENST00000397378 KRT17Q04695 432 aa10.84□□□□□ -0.67
NEDD9-203ENST00000397378 PPFIA1Q13136 1202 aa10.84□□□□□ -0.67
NEDD9-203ENST00000397378 FAM102BQ5T8I3 360 aa10.84□□□□□ -0.67
NEDD9-203ENST00000397378 POTEGQ6S5H5 508 aa10.84□□□□□ -0.67
NEDD9-203ENST00000397378 TMC5Q6UXY8 1006 aa10.84□□□□□ -0.67
NEDD9-203ENST00000397378 HOMER1Q86YM7 354 aa10.84□□□□□ -0.67
NEDD9-203ENST00000397378 TMEM87AQ8NBN3 555 aa10.84□□□□□ -0.67
NEDD9-203ENST00000397378 GIMAP8Q8ND71 665 aaPredicted RBP10.84□□□□□ -0.67
NEDD9-203ENST00000397378 PIGSQ96S52 555 aa10.84□□□□□ -0.67
NEDD9-203ENST00000397378 FAM49AQ9H0Q0 323 aaPredicted RBP10.84□□□□□ -0.67
NEDD9-203ENST00000397378 DZANK1Q9NVP4 752 aa10.84□□□□□ -0.67
NEDD9-203ENST00000397378 SMG5Q9UPR3 1016 aaKnown RBP10.84□□□□□ -0.67
NEDD9-203ENST00000397378 TELO2Q9Y4R8 837 aa10.84□□□□□ -0.67
NEDD9-203ENST00000397378 ASPMQ8IZT6 3477 aa10.84□□□□□ -0.67
NEDD9-203ENST00000397378 CYTH3O43739 400 aa10.83□□□□□ -0.68
NEDD9-203ENST00000397378 CLASP2O75122 1294 aaKnown RBP10.83□□□□□ -0.68
NEDD9-203ENST00000397378 TCF7P36402 384 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms