RNA–Protein interactions for RNA: ENST00000396655.6

NDUFA9-202, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 1 (best)

Gene NDUFA9, Length 1,037 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-202ENST00000396655 CKAP2LQ8IYA6 745 aa12.51□□□□□ -0.41
NDUFA9-202ENST00000396655 SLFN12Q8IYM2 578 aa12.51□□□□□ -0.41
NDUFA9-202ENST00000396655 OXER1Q8TDS5 423 aa12.51□□□□□ -0.41
NDUFA9-202ENST00000396655 FTHL17Q9BXU8 183 aa12.51□□□□□ -0.41
NDUFA9-202ENST00000396655 GJB4Q9NTQ9 266 aa12.51□□□□□ -0.41
NDUFA9-202ENST00000396655 GABBR1Q9UBS5 961 aa12.51□□□□□ -0.41
NDUFA9-202ENST00000396655 RAPGEFL1Q9UHV5 662 aa12.51□□□□□ -0.41
NDUFA9-202ENST00000396655 YBX2Q9Y2T7 364 aaKnown RBP12.51□□□□□ -0.41
NDUFA9-202ENST00000396655 GBF1Q92538 1859 aa12.51□□□□□ -0.41
NDUFA9-202ENST00000396655 TLL1O43897 1013 aa12.5□□□□□ -0.41
NDUFA9-202ENST00000396655 ST18O60284 1047 aa12.5□□□□□ -0.41
NDUFA9-202ENST00000396655 CCNT1O60563 726 aaKnown RBP12.5□□□□□ -0.41
NDUFA9-202ENST00000396655 JAK2O60674 1132 aa12.5□□□□□ -0.41
NDUFA9-202ENST00000396655 DKC1O60832 514 aaKnown RBP eCLIP12.5□□□□□ -0.41
NDUFA9-202ENST00000396655 CTSHP09668 335 aa12.5□□□□□ -0.41
NDUFA9-202ENST00000396655 POU3F3P20264 500 aaPredicted RBP12.5□□□□□ -0.41
NDUFA9-202ENST00000396655 MCM2P49736 904 aa12.5□□□□□ -0.41
NDUFA9-202ENST00000396655 RABGGTBP53611 331 aa12.5□□□□□ -0.41
NDUFA9-202ENST00000396655 CDC42EP1Q00587 391 aa12.5□□□□□ -0.41
NDUFA9-202ENST00000396655 SAFBQ15424 915 aaKnown RBP eCLIP12.5□□□□□ -0.41
NDUFA9-202ENST00000396655 XKR3Q5GH77 459 aa12.5□□□□□ -0.41
NDUFA9-202ENST00000396655 ODR4Q5SWX8 454 aa12.5□□□□□ -0.41
NDUFA9-202ENST00000396655 PPP2R2DQ66LE6 453 aa12.5□□□□□ -0.41
NDUFA9-202ENST00000396655 KRT40Q6A162 431 aa12.5□□□□□ -0.41
NDUFA9-202ENST00000396655 TSHZ1Q6ZSZ6 1077 aa12.5□□□□□ -0.41
NDUFA9-202ENST00000396655 MIER3Q7Z3K6 550 aa12.5□□□□□ -0.41
NDUFA9-202ENST00000396655 KIAA0319LQ8IZA0 1049 aa12.5□□□□□ -0.41
NDUFA9-202ENST00000396655 TOP1MTQ969P6 601 aa12.5□□□□□ -0.41
NDUFA9-202ENST00000396655 ZBED2Q9BTP6 218 aa12.5□□□□□ -0.41
NDUFA9-202ENST00000396655 CELF4Q9BZC1 486 aaKnown RBP12.5□□□□□ -0.41
NDUFA9-202ENST00000396655 NKX2-4Q9H2Z4 354 aa12.5□□□□□ -0.41
NDUFA9-202ENST00000396655 UNC45AQ9H3U1 944 aa12.5□□□□□ -0.41
NDUFA9-202ENST00000396655 INSL6Q9Y581 213 aa12.5□□□□□ -0.41
NDUFA9-202ENST00000396655 MICAL3Q7RTP6 2002 aa12.5□□□□□ -0.41
NDUFA9-202ENST00000396655 EVPLQ92817 2033 aa12.49□□□□□ -0.41
NDUFA9-202ENST00000396655 BTBD18B2RXH4 712 aa12.49□□□□□ -0.41
NDUFA9-202ENST00000396655 SLC37A4O43826 429 aa12.49□□□□□ -0.41
NDUFA9-202ENST00000396655 ZNF862O60290 1169 aa12.49□□□□□ -0.41
NDUFA9-202ENST00000396655 BAG4O95429 457 aaKnown RBP12.49□□□□□ -0.41
NDUFA9-202ENST00000396655 OATP04181 439 aa12.49□□□□□ -0.41
NDUFA9-202ENST00000396655 FOSL2P15408 326 aa12.49□□□□□ -0.41
NDUFA9-202ENST00000396655 COL9A1P20849 921 aa12.49□□□□□ -0.41
NDUFA9-202ENST00000396655 TMOD1P28289 359 aa12.49□□□□□ -0.41
NDUFA9-202ENST00000396655 DEFB103AP81534 67 aa12.49□□□□□ -0.41
NDUFA9-202ENST00000396655 HTRA4P83105 476 aaPredicted RBP12.49□□□□□ -0.41
NDUFA9-202ENST00000396655 ST3GAL1Q11201 340 aa12.49□□□□□ -0.41
NDUFA9-202ENST00000396655 NR5A1Q13285 461 aa12.49□□□□□ -0.41
NDUFA9-202ENST00000396655 ORC2Q13416 577 aaPredicted RBP12.49□□□□□ -0.41
NDUFA9-202ENST00000396655 LPIN1Q14693 890 aa12.49□□□□□ -0.41
NDUFA9-202ENST00000396655 TCTN1Q2MV58 587 aa12.49□□□□□ -0.41
NDUFA9-202ENST00000396655 DIS3L2Q8IYB7 885 aaKnown RBP12.49□□□□□ -0.41
NDUFA9-202ENST00000396655 FBXO18Q8NFZ0 1043 aa12.49□□□□□ -0.41
NDUFA9-202ENST00000396655 GAS2L1Q99501 681 aaPredicted RBP12.49□□□□□ -0.41
NDUFA9-202ENST00000396655 NIFKQ9BYG3 293 aaKnown RBP12.49□□□□□ -0.41
NDUFA9-202ENST00000396655 PPME1Q9Y570 386 aa12.49□□□□□ -0.41
NDUFA9-202ENST00000396655 TRPV2Q9Y5S1 764 aa12.49□□□□□ -0.41
NDUFA9-202ENST00000396655 CDY2AQ9Y6F7 541 aa12.49□□□□□ -0.41
NDUFA9-202ENST00000396655 BDP1A6H8Y1 2624 aa12.49□□□□□ -0.41
NDUFA9-202ENST00000396655 C22orf31O95567 290 aa12.48□□□□□ -0.41
NDUFA9-202ENST00000396655 CA3P07451 260 aa12.48□□□□□ -0.41
NDUFA9-202ENST00000396655 PSMC5P62195 406 aa12.48□□□□□ -0.41
NDUFA9-202ENST00000396655 TAP1Q03518 808 aa12.48□□□□□ -0.41
NDUFA9-202ENST00000396655 TARBP2Q15633 366 aaKnown RBP12.48□□□□□ -0.41
NDUFA9-202ENST00000396655 EARS2Q5JPH6 523 aaKnown RBP12.48□□□□□ -0.41
NDUFA9-202ENST00000396655 CCDC83Q8IWF9 413 aa12.48□□□□□ -0.41
NDUFA9-202ENST00000396655 EXOC8Q8IYI6 725 aa12.48□□□□□ -0.41
NDUFA9-202ENST00000396655 TRAPPC12Q8WVT3 735 aa12.48□□□□□ -0.41
NDUFA9-202ENST00000396655 MYLIPQ8WY64 445 aa12.48□□□□□ -0.41
NDUFA9-202ENST00000396655 SPOCK2Q92563 424 aa12.48□□□□□ -0.41
NDUFA9-202ENST00000396655 HAS1Q92839 578 aa12.48□□□□□ -0.41
NDUFA9-202ENST00000396655 C8orf76Q96K31 380 aa12.48□□□□□ -0.41
NDUFA9-202ENST00000396655 UIMC1Q96RL1 719 aa12.48□□□□□ -0.41
NDUFA9-202ENST00000396655 FAM49AQ9H0Q0 323 aaPredicted RBP12.48□□□□□ -0.41
NDUFA9-202ENST00000396655 FOXP1Q9H334 677 aaPredicted RBP12.48□□□□□ -0.41
NDUFA9-202ENST00000396655 VAV3Q9UKW4 847 aa12.48□□□□□ -0.41
NDUFA9-202ENST00000396655 KIF3AQ9Y496 699 aa12.48□□□□□ -0.41
NDUFA9-202ENST00000396655 TTC3P53804 2025 aa12.48□□□□□ -0.41
NDUFA9-202ENST00000396655 PTPRSQ13332 1948 aa12.47□□□□□ -0.41
NDUFA9-202ENST00000396655 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.47□□□□□ -0.41
NDUFA9-202ENST00000396655 ENPP3O14638 875 aa12.47□□□□□ -0.41
NDUFA9-202ENST00000396655 MARCH6O60337 910 aa12.47□□□□□ -0.41
NDUFA9-202ENST00000396655 P4HBP07237 508 aaKnown RBP12.47□□□□□ -0.41
NDUFA9-202ENST00000396655 GHRP10912 638 aa12.47□□□□□ -0.41
NDUFA9-202ENST00000396655 MYOGP15173 224 aa12.47□□□□□ -0.41
NDUFA9-202ENST00000396655 QARSP47897 775 aaKnown RBP12.47□□□□□ -0.41
NDUFA9-202ENST00000396655 NUBP1P53384 320 aa12.47□□□□□ -0.41
NDUFA9-202ENST00000396655 CRYBB1P53674 252 aaPredicted RBP12.47□□□□□ -0.41
NDUFA9-202ENST00000396655 PRKCEQ02156 737 aa12.47□□□□□ -0.41
NDUFA9-202ENST00000396655 EPHA7Q15375 998 aa12.47□□□□□ -0.41
NDUFA9-202ENST00000396655 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.47□□□□□ -0.413e-13■■■■■ 36.3
NDUFA9-202ENST00000396655 LINC01465Q8N7H1 131 aa12.47□□□□□ -0.41
NDUFA9-202ENST00000396655 MAFAQ8NHW3 353 aaPredicted RBP12.47□□□□□ -0.41
NDUFA9-202ENST00000396655 SP7Q8TDD2 431 aaPredicted RBP12.47□□□□□ -0.41
NDUFA9-202ENST00000396655 TBC1D32Q96NH3 1257 aa12.47□□□□□ -0.41
NDUFA9-202ENST00000396655 JPH2Q9BR39 696 aaPredicted RBP12.47□□□□□ -0.41
NDUFA9-202ENST00000396655 OSBPL7Q9BZF2 842 aa12.47□□□□□ -0.41
NDUFA9-202ENST00000396655 PRDM12Q9H4Q4 367 aa12.47□□□□□ -0.41
NDUFA9-202ENST00000396655 PADI3Q9ULW8 664 aa12.47□□□□□ -0.41
NDUFA9-202ENST00000396655 PCDHA12Q9UN75 941 aa12.47□□□□□ -0.41
NDUFA9-202ENST00000396655 COL4A6Q14031 1691 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms