RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 DCHS1Q96JQ0 3298 aa9.68□□□□□ -0.86
SCFD1-202ENST00000396629 HIDE1A8MVS5 230 aa9.68□□□□□ -0.86
SCFD1-202ENST00000396629 MAFGO15525 162 aa9.68□□□□□ -0.86
SCFD1-202ENST00000396629 ITIH3Q06033 890 aa9.68□□□□□ -0.86
SCFD1-202ENST00000396629 PLCB4Q15147 1175 aa9.68□□□□□ -0.86
SCFD1-202ENST00000396629 LLGL2Q6P1M3 1020 aa9.68□□□□□ -0.86
SCFD1-202ENST00000396629 SLC24A5Q71RS6 500 aa9.68□□□□□ -0.86
SCFD1-202ENST00000396629 ZDHHC14Q8IZN3 488 aa9.68□□□□□ -0.86
SCFD1-202ENST00000396629 TRAPPC12Q8WVT3 735 aa9.68□□□□□ -0.86
SCFD1-202ENST00000396629 CASP10Q92851 521 aa9.68□□□□□ -0.86
SCFD1-202ENST00000396629 ADAM2Q99965 735 aa9.68□□□□□ -0.86
SCFD1-202ENST00000396629 TCF25Q9BQ70 676 aa9.68□□□□□ -0.86
SCFD1-202ENST00000396629 ADAM7Q9H2U9 754 aa9.68□□□□□ -0.86
SCFD1-202ENST00000396629 SMOC2Q9H3U7 446 aa9.68□□□□□ -0.86
SCFD1-202ENST00000396629 PUF60Q9UHX1 559 aaKnown RBP9.68□□□□□ -0.86
SCFD1-202ENST00000396629 CDH22Q9UJ99 828 aa9.68□□□□□ -0.86
SCFD1-202ENST00000396629 NOC2LQ9Y3T9 749 aaKnown RBP9.68□□□□□ -0.86
SCFD1-202ENST00000396629 NFX1Q12986 1120 aaKnown RBP9.68□□□□□ -0.86
SCFD1-202ENST00000396629 ODR4Q5SWX8 454 aa9.68□□□□□ -0.86
SCFD1-202ENST00000396629 MTHFD1LQ6UB35 978 aa9.68□□□□□ -0.86
SCFD1-202ENST00000396629 PLPPR4Q7Z2D5 763 aa9.68□□□□□ -0.86
SCFD1-202ENST00000396629 ELAC1Q9H777 363 aaKnown RBP9.68□□□□□ -0.86
SCFD1-202ENST00000396629 CDHR5Q9HBB8 845 aa9.68□□□□□ -0.86
SCFD1-202ENST00000396629 SENP2Q9HC62 589 aa9.68□□□□□ -0.86
SCFD1-202ENST00000396629 JADE2Q9NQC1 790 aa9.68□□□□□ -0.86
SCFD1-202ENST00000396629 ENTPD7Q9NQZ7 604 aa9.68□□□□□ -0.86
SCFD1-202ENST00000396629 TSHZ2Q9NRE2 1034 aa9.68□□□□□ -0.86
SCFD1-202ENST00000396629 DIAPH3Q9NSV4 1193 aa9.68□□□□□ -0.86
SCFD1-202ENST00000396629 CACNA1AO00555 2505 aa9.67□□□□□ -0.86
SCFD1-202ENST00000396629 HIP1O00291 1037 aa9.67□□□□□ -0.86
SCFD1-202ENST00000396629 RPS6KA5O75582 802 aa9.67□□□□□ -0.86
SCFD1-202ENST00000396629 MTHFRP42898 656 aa9.67□□□□□ -0.86
SCFD1-202ENST00000396629 HDAC1Q13547 482 aaPredicted RBP9.67□□□□□ -0.86
SCFD1-202ENST00000396629 MTMR1Q13613 665 aa9.67□□□□□ -0.86
SCFD1-202ENST00000396629 CWF19L1Q69YN2 538 aaKnown RBP9.67□□□□□ -0.86
SCFD1-202ENST00000396629 CES5AQ6NT32 575 aa9.67□□□□□ -0.86
SCFD1-202ENST00000396629 SPZ1Q9BXG8 430 aa9.67□□□□□ -0.86
SCFD1-202ENST00000396629 OSBPL3Q9H4L5 887 aa9.67□□□□□ -0.86
SCFD1-202ENST00000396629 ATP6V0A4Q9HBG4 840 aa9.67□□□□□ -0.86
SCFD1-202ENST00000396629 TMEM161AQ9NX61 479 aa9.67□□□□□ -0.86
SCFD1-202ENST00000396629 DMDP11532 3685 aa9.67□□□□□ -0.86
SCFD1-202ENST00000396629 DENND3A2RUS2 1198 aa9.66□□□□□ -0.86
SCFD1-202ENST00000396629 IFIT3O14879 490 aaKnown RBP9.66□□□□□ -0.86
SCFD1-202ENST00000396629 ASGR2P07307 311 aa9.66□□□□□ -0.86
SCFD1-202ENST00000396629 IBSPP21815 317 aaPredicted RBP9.66□□□□□ -0.86
SCFD1-202ENST00000396629 PDE4AP27815 886 aa9.66□□□□□ -0.86
SCFD1-202ENST00000396629 SMARCA1P28370 1054 aa9.66□□□□□ -0.86
SCFD1-202ENST00000396629 DSC3Q14574 896 aa9.66□□□□□ -0.86
SCFD1-202ENST00000396629 KCNT2Q6UVM3 1135 aa9.66□□□□□ -0.86
SCFD1-202ENST00000396629 LRRC55Q6ZSA7 311 aa9.66□□□□□ -0.86
SCFD1-202ENST00000396629 PIBF1Q8WXW3 757 aa9.66□□□□□ -0.86
SCFD1-202ENST00000396629 CASD1Q96PB1 797 aa9.66□□□□□ -0.86
SCFD1-202ENST00000396629 TMEM117Q9H0C3 514 aa9.66□□□□□ -0.86
SCFD1-202ENST00000396629 MFSD1Q9H3U5 465 aa9.66□□□□□ -0.86
SCFD1-202ENST00000396629 AZI2Q9H6S1 392 aa9.66□□□□□ -0.86
SCFD1-202ENST00000396629 JPH1Q9HDC5 661 aaPredicted RBP9.66□□□□□ -0.86
SCFD1-202ENST00000396629 RNF19AQ9NV58 838 aa9.66□□□□□ -0.86
SCFD1-202ENST00000396629 PKD2L1Q9P0L9 805 aa9.66□□□□□ -0.86
SCFD1-202ENST00000396629 SLC9A2Q9UBY0 812 aa9.66□□□□□ -0.86
SCFD1-202ENST00000396629 ST3GAL5Q9UNP4 418 aa9.66□□□□□ -0.86
SCFD1-202ENST00000396629 HCFC2Q9Y5Z7 792 aa9.66□□□□□ -0.86
SCFD1-202ENST00000396629 GPR182O15218 404 aa9.66□□□□□ -0.86
SCFD1-202ENST00000396629 CLASP2O75122 1294 aaKnown RBP9.66□□□□□ -0.86
SCFD1-202ENST00000396629 ATG7O95352 703 aa9.66□□□□□ -0.86
SCFD1-202ENST00000396629 FGFR1P11362 822 aa9.66□□□□□ -0.86
SCFD1-202ENST00000396629 PPM1AP35813 382 aa9.66□□□□□ -0.86
SCFD1-202ENST00000396629 STAT5BP51692 787 aa9.66□□□□□ -0.86
SCFD1-202ENST00000396629 WTAPQ15007 396 aa9.66□□□□□ -0.86
SCFD1-202ENST00000396629 TMC7Q7Z402 723 aa9.66□□□□□ -0.86
SCFD1-202ENST00000396629 CCDC105Q8IYK2 499 aa9.66□□□□□ -0.86
SCFD1-202ENST00000396629 KIAA0319LQ8IZA0 1049 aa9.66□□□□□ -0.86
SCFD1-202ENST00000396629 PLCD3Q8N3E9 789 aa9.66□□□□□ -0.86
SCFD1-202ENST00000396629 MRPL43Q8N983 215 aaKnown RBP9.66□□□□□ -0.86
SCFD1-202ENST00000396629 TMEM40Q8WWA1 233 aa9.66□□□□□ -0.86
SCFD1-202ENST00000396629 RRP36Q96EU6 259 aaKnown RBP9.66□□□□□ -0.86
SCFD1-202ENST00000396629 MAP3K14Q99558 947 aa9.66□□□□□ -0.86
SCFD1-202ENST00000396629 LNPKQ9C0E8 428 aa9.66□□□□□ -0.86
SCFD1-202ENST00000396629 LIMD1Q9UGP4 676 aa9.66□□□□□ -0.86
SCFD1-202ENST00000396629 USTQ9Y2C2 406 aa9.66□□□□□ -0.86
SCFD1-202ENST00000396629 NFASCO94856 1347 aa9.66□□□□□ -0.86
SCFD1-202ENST00000396629 VPS13AQ96RL7 3174 aa9.65□□□□□ -0.86
SCFD1-202ENST00000396629 ERICH2A1L162 156 aa9.65□□□□□ -0.86
SCFD1-202ENST00000396629 C2orf71A6NGG8 1288 aa9.65□□□□□ -0.86
SCFD1-202ENST00000396629 NPR3P17342 541 aa9.65□□□□□ -0.86
SCFD1-202ENST00000396629 AOC1P19801 751 aa9.65□□□□□ -0.86
SCFD1-202ENST00000396629 KLRC1P26715 233 aa9.65□□□□□ -0.86
SCFD1-202ENST00000396629 ACTR2P61160 394 aa9.65□□□□□ -0.86
SCFD1-202ENST00000396629 KRT17Q04695 432 aa9.65□□□□□ -0.86
SCFD1-202ENST00000396629 TRDNQ13061 729 aa9.65□□□□□ -0.86
SCFD1-202ENST00000396629 SMC1AQ14683 1233 aaKnown RBP9.65□□□□□ -0.86
SCFD1-202ENST00000396629 KIAA1841Q6NSI8 718 aa9.65□□□□□ -0.86
SCFD1-202ENST00000396629 FAM228AQ86W67 206 aa9.65□□□□□ -0.86
SCFD1-202ENST00000396629 PLEKHM2Q8IWE5 1019 aa9.65□□□□□ -0.86
SCFD1-202ENST00000396629 TDRD5Q8NAT2 981 aaKnown RBP9.65□□□□□ -0.86
SCFD1-202ENST00000396629 ZNF558Q96NG5 402 aa9.65□□□□□ -0.86
SCFD1-202ENST00000396629 SPG21Q9NZD8 308 aa9.65□□□□□ -0.86
SCFD1-202ENST00000396629 GVINP1Q7Z2Y8 2422 aa9.65□□□□□ -0.87
SCFD1-202ENST00000396629 IGKV6D-21A0A0A0MT36 114 aa9.65□□□□□ -0.87
SCFD1-202ENST00000396629 HOXA2O43364 376 aa9.65□□□□□ -0.87
SCFD1-202ENST00000396629 PI15O43692 258 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms