RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 CEP57Q86XR8 500 aa16.83■□□□□ 0.28
GNE-202ENST00000396594 CMTR1Q8N1G2 835 aaKnown RBP16.83■□□□□ 0.28
GNE-202ENST00000396594 RMDN3Q96TC7 470 aa16.83■□□□□ 0.28
GNE-202ENST00000396594 RAD17O75943 681 aa16.83■□□□□ 0.28
GNE-202ENST00000396594 ITKQ08881 620 aa16.83■□□□□ 0.28
GNE-202ENST00000396594 CENPUQ71F23 418 aa16.83■□□□□ 0.28
GNE-202ENST00000396594 FRMD5Q7Z6J6 570 aa16.83■□□□□ 0.28
GNE-202ENST00000396594 ERICH1Q86X53 443 aa16.83■□□□□ 0.28
GNE-202ENST00000396594 EPSTI1Q96J88 318 aa16.83■□□□□ 0.28
GNE-202ENST00000396594 OSBPL5Q9H0X9 879 aaPredicted RBP16.83■□□□□ 0.28
GNE-202ENST00000396594 PRKAB2O43741 272 aa16.83■□□□□ 0.28
GNE-202ENST00000396594 GAS2O43903 313 aaKnown RBP16.83■□□□□ 0.28
GNE-202ENST00000396594 MSH2P43246 934 aa16.83■□□□□ 0.28
GNE-202ENST00000396594 DBN1Q16643 649 aa16.83■□□□□ 0.28
GNE-202ENST00000396594 C6orf118Q5T5N4 469 aa16.83■□□□□ 0.28
GNE-202ENST00000396594 CATSPER4Q7RTX7 472 aa16.83■□□□□ 0.28
GNE-202ENST00000396594 EFHD1Q9BUP0 239 aa16.83■□□□□ 0.28
GNE-202ENST00000396594 VPS33BQ9H267 617 aa16.83■□□□□ 0.28
GNE-202ENST00000396594 LY9Q9HBG7 655 aa16.83■□□□□ 0.28
GNE-202ENST00000396594 EPS15L1Q9UBC2 864 aa16.83■□□□□ 0.28
GNE-202ENST00000396594 NDUFA10O95299 355 aa16.82■□□□□ 0.28
GNE-202ENST00000396594 PCK1P35558 622 aa16.82■□□□□ 0.28
GNE-202ENST00000396594 RASSF7Q02833 373 aa16.82■□□□□ 0.28
GNE-202ENST00000396594 RBL2Q08999 1139 aa16.82■□□□□ 0.28
GNE-202ENST00000396594 ARHGEF1Q92888 912 aaKnown RBP16.82■□□□□ 0.28
GNE-202ENST00000396594 ACAP3Q96P50 834 aa16.82■□□□□ 0.28
GNE-202ENST00000396594 KLC2Q9H0B6 622 aa16.82■□□□□ 0.28
GNE-202ENST00000396594 MTIF3Q9H2K0 278 aaKnown RBP16.82■□□□□ 0.28
GNE-202ENST00000396594 UBE2TQ9NPD8 197 aaPredicted RBP16.82■□□□□ 0.28
GNE-202ENST00000396594 SRP68Q9UHB9 627 aaKnown RBP16.82■□□□□ 0.28
GNE-202ENST00000396594 SGK1O00141 431 aa16.82■□□□□ 0.28
GNE-202ENST00000396594 CSF1RP07333 972 aa16.82■□□□□ 0.28
GNE-202ENST00000396594 FCER1AP12319 257 aa16.82■□□□□ 0.28
GNE-202ENST00000396594 ACTN1P12814 892 aa16.82■□□□□ 0.28
GNE-202ENST00000396594 KCNJ6P48051 423 aa16.82■□□□□ 0.28
GNE-202ENST00000396594 TFAMQ00059 246 aaKnown RBP16.82■□□□□ 0.28
GNE-202ENST00000396594 MESDQ14696 234 aa16.82■□□□□ 0.28
GNE-202ENST00000396594 ATG16L1Q676U5 607 aa16.82■□□□□ 0.28
GNE-202ENST00000396594 DSTYKQ6XUX3 929 aa16.82■□□□□ 0.28
GNE-202ENST00000396594 SYDE1Q6ZW31 735 aaPredicted RBP16.82■□□□□ 0.28
GNE-202ENST00000396594 VPS39Q96JC1 886 aa16.82■□□□□ 0.28
GNE-202ENST00000396594 SCYL1Q96KG9 808 aa16.82■□□□□ 0.28
GNE-202ENST00000396594 NHEJ1Q9H9Q4 299 aaPredicted RBP16.82■□□□□ 0.28
GNE-202ENST00000396594 PRDM10Q9NQV6 1147 aa16.82■□□□□ 0.28
GNE-202ENST00000396594 PCDHA13Q9Y5I0 950 aa16.82■□□□□ 0.28
GNE-202ENST00000396594 SMAPO00193 183 aa16.82■□□□□ 0.28
GNE-202ENST00000396594 PSMD3O43242 534 aa16.82■□□□□ 0.28
GNE-202ENST00000396594 RFC5P40937 340 aa16.82■□□□□ 0.28
GNE-202ENST00000396594 ECE1P42892 770 aa16.82■□□□□ 0.28
GNE-202ENST00000396594 TRERF1Q96PN7 1200 aa16.82■□□□□ 0.28
GNE-202ENST00000396594 TLK1Q9UKI8 766 aa16.82■□□□□ 0.28
GNE-202ENST00000396594 PPME1Q9Y570 386 aa16.82■□□□□ 0.28
GNE-202ENST00000396594 SPATA31A1Q5TZJ5 1347 aa16.82■□□□□ 0.28
GNE-202ENST00000396594 PAPOLAP51003 745 aaKnown RBP16.82■□□□□ 0.28
GNE-202ENST00000396594 RNF146Q9NTX7 359 aa16.82■□□□□ 0.28
GNE-202ENST00000396594 SPATA31D1Q6ZQQ2 1576 aa16.81■□□□□ 0.28
GNE-202ENST00000396594 MFAP3LO75121 409 aa16.81■□□□□ 0.28
GNE-202ENST00000396594 KRT7P08729 469 aa16.81■□□□□ 0.28
GNE-202ENST00000396594 YWHAGP61981 247 aaKnown RBP eCLIP16.81■□□□□ 0.28
GNE-202ENST00000396594 FOXO4P98177 505 aa16.81■□□□□ 0.28
GNE-202ENST00000396594 PDE1BQ01064 536 aa16.81■□□□□ 0.28
GNE-202ENST00000396594 KIF2CQ99661 725 aa16.81■□□□□ 0.28
GNE-202ENST00000396594 CCSER1Q9C0I3 900 aa16.81■□□□□ 0.28
GNE-202ENST00000396594 MAGEB2O15479 319 aa16.81■□□□□ 0.28
GNE-202ENST00000396594 CLDN3O15551 220 aa16.81■□□□□ 0.28
GNE-202ENST00000396594 GPC4O75487 556 aa16.81■□□□□ 0.28
GNE-202ENST00000396594 TXNRD1Q16881 649 aa16.81■□□□□ 0.28
GNE-202ENST00000396594 SIRT2Q8IXJ6 389 aa16.81■□□□□ 0.28
GNE-202ENST00000396594 KCTD6Q8NC69 237 aa16.81■□□□□ 0.28
GNE-202ENST00000396594 SCG3Q8WXD2 468 aaKnown RBP16.81■□□□□ 0.28
GNE-202ENST00000396594 U2AF2P26368 475 aaKnown RBP eCLIP16.81■□□□□ 0.28
GNE-202ENST00000396594 STAT3P40763 770 aa16.81■□□□□ 0.28
GNE-202ENST00000396594 PDIK1LQ8N165 341 aa16.81■□□□□ 0.28
GNE-202ENST00000396594 EYA4O95677 639 aa16.81■□□□□ 0.28
GNE-202ENST00000396594 CHEK2O96017 543 aa16.81■□□□□ 0.28
GNE-202ENST00000396594 GSTA1P08263 222 aa16.81■□□□□ 0.28
GNE-202ENST00000396594 GSTA2P09210 222 aa16.81■□□□□ 0.28
GNE-202ENST00000396594 PADI6Q6TGC4 694 aa16.81■□□□□ 0.28
GNE-202ENST00000396594 GBP7Q8N8V2 638 aaPredicted RBP16.81■□□□□ 0.28
GNE-202ENST00000396594 NUDCD1Q96RS6 583 aa16.81■□□□□ 0.28
GNE-202ENST00000396594 TAC1P20366 129 aa16.8■□□□□ 0.28
GNE-202ENST00000396594 GPC3P51654 580 aa16.8■□□□□ 0.28
GNE-202ENST00000396594 RNASE9P60153 205 aaKnown RBP16.8■□□□□ 0.28
GNE-202ENST00000396594 KNOP1Q1ED39 458 aaKnown RBP16.8■□□□□ 0.28
GNE-202ENST00000396594 SPICE1Q8N0Z3 855 aa16.8■□□□□ 0.28
GNE-202ENST00000396594 MMP19Q99542 508 aa16.8■□□□□ 0.28
GNE-202ENST00000396594 WDR35Q9P2L0 1181 aa16.8■□□□□ 0.28
GNE-202ENST00000396594 KCNH4Q9UQ05 1017 aa16.8■□□□□ 0.28
GNE-202ENST00000396594 ANGPTL3Q9Y5C1 460 aa16.8■□□□□ 0.28
GNE-202ENST00000396594 BUB1O43683 1085 aa16.8■□□□□ 0.28
GNE-202ENST00000396594 HUS1O60921 280 aa16.8■□□□□ 0.28
GNE-202ENST00000396594 EHHADHQ08426 723 aa16.8■□□□□ 0.28
GNE-202ENST00000396594 C12orf60Q5U649 245 aa16.8■□□□□ 0.28
GNE-202ENST00000396594 ITPRIPL1Q6GPH6 555 aa16.8■□□□□ 0.28
GNE-202ENST00000396594 PIK3C2BO00750 1634 aa16.8■□□□□ 0.28
GNE-202ENST00000396594 CEP170BQ9Y4F5 1589 aaPredicted RBP16.8■□□□□ 0.28
GNE-202ENST00000396594 HLFQ16534 295 aa16.8■□□□□ 0.28
GNE-202ENST00000396594 ANKRD20A4Q4UJ75 823 aa16.8■□□□□ 0.28
GNE-202ENST00000396594 ANKRD20A8PQ5CZ79 823 aa16.8■□□□□ 0.28
GNE-202ENST00000396594 ANKRD20A2Q5SQ80 823 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms