RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 MICU3Q86XE3 530 aa9.11□□□□□ -0.95
NDE1-202ENST00000396355 RTKN2Q8IZC4 609 aa9.11□□□□□ -0.95
NDE1-202ENST00000396355 SMCR8Q8TEV9 937 aaPredicted RBP9.11□□□□□ -0.95
NDE1-202ENST00000396355 CHMP6Q96FZ7 201 aa9.11□□□□□ -0.95
NDE1-202ENST00000396355 MYL10Q9BUA6 226 aa9.11□□□□□ -0.95
NDE1-202ENST00000396355 NKIRAS1Q9NYS0 192 aa9.11□□□□□ -0.95
NDE1-202ENST00000396355 MOSPD1Q9UJG1 213 aa9.11□□□□□ -0.95
NDE1-202ENST00000396355 ABCC12Q96J65 1359 aa9.11□□□□□ -0.95
NDE1-202ENST00000396355 A8MUI8 341 aa9.11□□□□□ -0.95
NDE1-202ENST00000396355 HMGB1P1B2RPK0 211 aaPredicted RBP9.11□□□□□ -0.95
NDE1-202ENST00000396355 GALK1P51570 392 aa9.11□□□□□ -0.95
NDE1-202ENST00000396355 RALGDSQ12967 914 aa9.11□□□□□ -0.95
NDE1-202ENST00000396355 SEPT2Q15019 361 aa9.11□□□□□ -0.95
NDE1-202ENST00000396355 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.11□□□□□ -0.95
NDE1-202ENST00000396355 TBC1D5Q92609 795 aa9.11□□□□□ -0.95
NDE1-202ENST00000396355 LZTS2Q9BRK4 669 aa9.11□□□□□ -0.95
NDE1-202ENST00000396355 HAUS4Q9H6D7 363 aa9.11□□□□□ -0.95
NDE1-202ENST00000396355 EPB41L4AQ9HCS5 686 aaPredicted RBP9.11□□□□□ -0.95
NDE1-202ENST00000396355 FAM217BQ9NTX9 383 aaPredicted RBP9.11□□□□□ -0.95
NDE1-202ENST00000396355 ZNF532Q9HCE3 1301 aa9.11□□□□□ -0.95
NDE1-202ENST00000396355 MINDY4BA8MYZ0 360 aa9.11□□□□□ -0.95
NDE1-202ENST00000396355 B4E1Z4 1266 aa9.11□□□□□ -0.95
NDE1-202ENST00000396355 NVLO15381 856 aaKnown RBP9.11□□□□□ -0.95
NDE1-202ENST00000396355 PYGMP11217 842 aa9.11□□□□□ -0.95
NDE1-202ENST00000396355 ADARP55265 1226 aaKnown RBP9.11□□□□□ -0.95
NDE1-202ENST00000396355 TRIM67Q6ZTA4 783 aa9.11□□□□□ -0.95
NDE1-202ENST00000396355 PHLDB2Q86SQ0 1253 aa9.11□□□□□ -0.95
NDE1-202ENST00000396355 HDAC7Q8WUI4 952 aa9.11□□□□□ -0.95
NDE1-202ENST00000396355 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.11□□□□□ -0.95
NDE1-202ENST00000396355 LRP2BPQ9P2M1 347 aa9.11□□□□□ -0.95
NDE1-202ENST00000396355 C6orf229H3BNL8 230 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 FGFR1OPO95684 399 aaKnown RBP9.1□□□□□ -0.95
NDE1-202ENST00000396355 MAGEA1P43355 309 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 ALDH5A1P51649 535 aaPredicted RBP9.1□□□□□ -0.95
NDE1-202ENST00000396355 NTRK3Q16288 839 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 ANO1Q5XXA6 986 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 APOA5Q6Q788 366 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 LDHDQ86WU2 507 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 KIAA2013Q8IYS2 634 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 TEX9Q8N6V9 391 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 MSANTD4Q8NCY6 345 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 MPP4Q96JB8 637 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 IFIH1Q9BYX4 1025 aaKnown RBP9.1□□□□□ -0.95
NDE1-202ENST00000396355 ZHX3Q9H4I2 956 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 CNGB3Q9NQW8 809 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 STOML1Q9UBI4 398 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 LEMD3Q9Y2U8 911 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 NPHP3-ACAD11A0A0J9YXS1 232 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 TRIM64CA6NLI5 447 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 SH2B2O14492 632 aaPredicted RBP9.1□□□□□ -0.95
NDE1-202ENST00000396355 NCK2O43639 380 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 POTEIP0CG38 1075 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 POTEJP0CG39 1038 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 ATP6V1B1P15313 513 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 NPR1P16066 1061 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 CARSP49589 748 aaKnown RBP9.1□□□□□ -0.95
NDE1-202ENST00000396355 PSMC1P62191 440 aaKnown RBP9.1□□□□□ -0.95
NDE1-202ENST00000396355 MCL1Q07820 350 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 LLGL1Q15334 1064 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 HSP90AA5PQ58FG0 334 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 EMBQ6PCB8 327 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 MIGA2Q7L4E1 593 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 TRPM8Q7Z2W7 1104 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 GALNT15Q8N3T1 639 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 DNAJC5GQ8N7S2 189 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 KIFAP3Q92845 792 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 PLIN2Q99541 437 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.1□□□□□ -0.957e-8■■■■□ 23.4
NDE1-202ENST00000396355 ANGEL1Q9UNK9 670 aaKnown RBP9.1□□□□□ -0.95
NDE1-202ENST00000396355 BCORQ6W2J9 1755 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 ZMYM6O95789 1325 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 ARHGAP42A6NI28 874 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 WDR46O15213 610 aaKnown RBP9.1□□□□□ -0.95
NDE1-202ENST00000396355 KDM1AO60341 852 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 SMNDC1O75940 238 aaKnown RBP eCLIP9.1□□□□□ -0.95
NDE1-202ENST00000396355 KRT75O95678 551 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 PPP2R2AP63151 447 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 EHHADHQ08426 723 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 PLCB4Q15147 1175 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 SHC4Q6S5L8 630 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 POTEEQ6S8J3 1075 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 AASDHPPTQ9NRN7 309 aa9.1□□□□□ -0.95
NDE1-202ENST00000396355 TIAM2Q8IVF5 1701 aa9.09□□□□□ -0.95
NDE1-202ENST00000396355 CFAP73A6NFT4 308 aa9.09□□□□□ -0.95
NDE1-202ENST00000396355 GFPT2O94808 682 aa9.09□□□□□ -0.95
NDE1-202ENST00000396355 UBOX5O94941 541 aa9.09□□□□□ -0.95
NDE1-202ENST00000396355 PDE8BO95263 885 aa9.09□□□□□ -0.95
NDE1-202ENST00000396355 MOCS3O95396 460 aa9.09□□□□□ -0.95
NDE1-202ENST00000396355 NQO1P15559 274 aaKnown RBP9.09□□□□□ -0.95
NDE1-202ENST00000396355 PDE6AP16499 860 aa9.09□□□□□ -0.95
NDE1-202ENST00000396355 TM4SF1P30408 202 aa9.09□□□□□ -0.95
NDE1-202ENST00000396355 IL6STP40189 918 aaPredicted RBP9.09□□□□□ -0.95
NDE1-202ENST00000396355 IARSP41252 1262 aaKnown RBP9.09□□□□□ -0.95
NDE1-202ENST00000396355 PTPAQ15257 358 aa9.09□□□□□ -0.95
NDE1-202ENST00000396355 NFRKBQ6P4R8 1299 aa9.09□□□□□ -0.95
NDE1-202ENST00000396355 PPP1R21Q6ZMI0 780 aa9.09□□□□□ -0.95
NDE1-202ENST00000396355 CCNJLQ8IV13 435 aa9.09□□□□□ -0.95
NDE1-202ENST00000396355 IGDCC4Q8TDY8 1250 aa9.09□□□□□ -0.95
NDE1-202ENST00000396355 CEP295NLQ96MC4 621 aa9.09□□□□□ -0.95
NDE1-202ENST00000396355 ZBED2Q9BTP6 218 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms