RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 TARBP2Q15633 366 aaKnown RBP18.55■□□□□ 0.56
CXCL1-201ENST00000395761 MTERF2Q49AM1 385 aa18.55■□□□□ 0.56
CXCL1-201ENST00000395761 TMEM240Q5SV17 173 aa18.55■□□□□ 0.56
CXCL1-201ENST00000395761 PLA2G4FQ68DD2 849 aa18.55■□□□□ 0.56
CXCL1-201ENST00000395761 ZNF365Q70YC5 407 aa18.55■□□□□ 0.56
CXCL1-201ENST00000395761 RPAINQ86UA6 219 aa18.55■□□□□ 0.56
CXCL1-201ENST00000395761 C4orf19Q8IY42 314 aa18.55■□□□□ 0.56
CXCL1-201ENST00000395761 KIAA0319LQ8IZA0 1049 aa18.55■□□□□ 0.56
CXCL1-201ENST00000395761 FTOQ9C0B1 505 aaKnown RBP eCLIP18.55■□□□□ 0.56
CXCL1-201ENST00000395761 ZSWIM4Q9H7M6 989 aa18.55■□□□□ 0.56
CXCL1-201ENST00000395761 CEP131Q9UPN4 1083 aa18.55■□□□□ 0.56
CXCL1-201ENST00000395761 RANBP2P49792 3224 aaKnown RBP18.55■□□□□ 0.56
CXCL1-201ENST00000395761 SMIM35A0A1B0GVV1 85 aa18.54■□□□□ 0.56
CXCL1-201ENST00000395761 MED24O75448 989 aa18.54■□□□□ 0.56
CXCL1-201ENST00000395761 CHRNA1P02708 482 aa18.54■□□□□ 0.56
CXCL1-201ENST00000395761 RFC2P35250 354 aa18.54■□□□□ 0.56
CXCL1-201ENST00000395761 PRPHP41219 470 aa18.54■□□□□ 0.56
CXCL1-201ENST00000395761 NPEPPSP55786 919 aa18.54■□□□□ 0.56
CXCL1-201ENST00000395761 TMEM62Q0P6H9 643 aa18.54■□□□□ 0.56
CXCL1-201ENST00000395761 SF3A1Q15459 793 aaKnown RBP18.54■□□□□ 0.56
CXCL1-201ENST00000395761 TMEM266Q2M3C6 531 aa18.54■□□□□ 0.56
CXCL1-201ENST00000395761 DTHD1Q6ZMT9 781 aa18.54■□□□□ 0.56
CXCL1-201ENST00000395761 CATSPER3Q86XQ3 398 aa18.54■□□□□ 0.56
CXCL1-201ENST00000395761 RPUSD2Q8IZ73 545 aaKnown RBP18.54■□□□□ 0.56
CXCL1-201ENST00000395761 TDHQ8IZJ6 230 aa18.54■□□□□ 0.56
CXCL1-201ENST00000395761 METTL13Q8N6R0 699 aa18.54■□□□□ 0.56
CXCL1-201ENST00000395761 ZSCAN16Q9H4T2 348 aaPredicted RBP18.54■□□□□ 0.56
CXCL1-201ENST00000395761 LRWD1Q9UFC0 647 aa18.54■□□□□ 0.56
CXCL1-201ENST00000395761 CLIC4Q9Y696 253 aa18.54■□□□□ 0.56
CXCL1-201ENST00000395761 PP2D1A8MPX8 630 aa18.53■□□□□ 0.56
CXCL1-201ENST00000395761 DKC1O60832 514 aaKnown RBP eCLIP18.53■□□□□ 0.56
CXCL1-201ENST00000395761 CAND2O75155 1236 aa18.53■□□□□ 0.56
CXCL1-201ENST00000395761 YWHABP31946 246 aaKnown RBP18.53■□□□□ 0.56
CXCL1-201ENST00000395761 SCN5AQ14524 2016 aa18.53■□□□□ 0.56
CXCL1-201ENST00000395761 PDIA5Q14554 519 aa18.53■□□□□ 0.56
CXCL1-201ENST00000395761 FAM26DQ5JW98 314 aa18.53■□□□□ 0.56
CXCL1-201ENST00000395761 LRRC71Q8N4P6 559 aa18.53■□□□□ 0.56
CXCL1-201ENST00000395761 IGSF22Q8N9C0 903 aa18.53■□□□□ 0.56
CXCL1-201ENST00000395761 CIZ1Q9ULV3 898 aaPredicted RBP18.53■□□□□ 0.56
CXCL1-201ENST00000395761 MAGEB2O15479 319 aa18.52■□□□□ 0.56
CXCL1-201ENST00000395761 LYPLA2O95372 231 aa18.52■□□□□ 0.56
CXCL1-201ENST00000395761 FGBP02675 491 aa18.52■□□□□ 0.56
CXCL1-201ENST00000395761 CXCL10P02778 98 aa18.52■□□□□ 0.56
CXCL1-201ENST00000395761 ZSCAN22P10073 491 aaPredicted RBP18.52■□□□□ 0.56
CXCL1-201ENST00000395761 CDC25AP30304 524 aa18.52■□□□□ 0.56
CXCL1-201ENST00000395761 CLCN3P51790 818 aa18.52■□□□□ 0.56
CXCL1-201ENST00000395761 MRPS6P82932 125 aaKnown RBP18.52■□□□□ 0.56
CXCL1-201ENST00000395761 MGAT3Q09327 533 aa18.52■□□□□ 0.56
CXCL1-201ENST00000395761 TBC1D8BQ0IIM8 1120 aa18.52■□□□□ 0.56
CXCL1-201ENST00000395761 TCTN1Q2MV58 587 aa18.52■□□□□ 0.56
CXCL1-201ENST00000395761 HABP4Q5JVS0 413 aaKnown RBP18.52■□□□□ 0.56
CXCL1-201ENST00000395761 EFCAB12Q6NXP0 572 aa18.52■□□□□ 0.56
CXCL1-201ENST00000395761 OTOP2Q7RTS6 562 aa18.52■□□□□ 0.56
CXCL1-201ENST00000395761 RSPH3Q86UC2 560 aa18.52■□□□□ 0.56
CXCL1-201ENST00000395761 LINC01465Q8N7H1 131 aa18.52■□□□□ 0.56
CXCL1-201ENST00000395761 ERMNQ8TAM6 284 aa18.52■□□□□ 0.56
CXCL1-201ENST00000395761 NEK9Q8TD19 979 aa18.52■□□□□ 0.56
CXCL1-201ENST00000395761 PIGOQ8TEQ8 1089 aa18.52■□□□□ 0.56
CXCL1-201ENST00000395761 POLR3CQ9BUI4 534 aaPredicted RBP18.52■□□□□ 0.56
CXCL1-201ENST00000395761 SUGCTQ9HAC7 445 aa18.52■□□□□ 0.56
CXCL1-201ENST00000395761 CYP26B1Q9NR63 512 aa18.52■□□□□ 0.56
CXCL1-201ENST00000395761 CDY2AQ9Y6F7 541 aa18.52■□□□□ 0.56
CXCL1-201ENST00000395761 VWA3AA6NCI4 1184 aa18.51■□□□□ 0.55
CXCL1-201ENST00000395761 CEBPZQ03701 1054 aaKnown RBP18.51■□□□□ 0.55
CXCL1-201ENST00000395761 MKRN4PQ13434 485 aaPredicted RBP18.51■□□□□ 0.55
CXCL1-201ENST00000395761 PTPAQ15257 358 aa18.51■□□□□ 0.55
CXCL1-201ENST00000395761 ECM1Q16610 540 aa18.51■□□□□ 0.55
CXCL1-201ENST00000395761 PSRC1Q6PGN9 363 aaPredicted RBP18.51■□□□□ 0.55
CXCL1-201ENST00000395761 NME8Q8N427 588 aa18.51■□□□□ 0.55
CXCL1-201ENST00000395761 CEP170P1Q96L14 293 aa18.51■□□□□ 0.55
CXCL1-201ENST00000395761 TUFT1Q9NNX1 390 aa18.51■□□□□ 0.55
CXCL1-201ENST00000395761 CXXC1Q9P0U4 656 aaPredicted RBP18.51■□□□□ 0.55
CXCL1-201ENST00000395761 TANC1Q9C0D5 1861 aa18.51■□□□□ 0.55
CXCL1-201ENST00000395761 TRIOBPQ9H2D6 2365 aa18.5■□□□□ 0.55
CXCL1-201ENST00000395761 IGKV6-21A0A0C4DH24 114 aa18.5■□□□□ 0.55
CXCL1-201ENST00000395761 A0A1W2PPC1 479 aa18.5■□□□□ 0.55
CXCL1-201ENST00000395761 MAFO75444 373 aaPredicted RBP18.5■□□□□ 0.55
CXCL1-201ENST00000395761 PARNO95453 639 aaKnown RBP18.5■□□□□ 0.55
CXCL1-201ENST00000395761 F13A1P00488 732 aa18.5■□□□□ 0.55
CXCL1-201ENST00000395761 RPA1P27694 616 aa18.5■□□□□ 0.55
CXCL1-201ENST00000395761 CCT6AP40227 531 aaKnown RBP18.5■□□□□ 0.55
CXCL1-201ENST00000395761 NUCB2P80303 420 aa18.5■□□□□ 0.55
CXCL1-201ENST00000395761 GRIN1Q05586 938 aa18.5■□□□□ 0.55
CXCL1-201ENST00000395761 DRP2Q13474 957 aa18.5■□□□□ 0.55
CXCL1-201ENST00000395761 XKR9Q5GH70 373 aa18.5■□□□□ 0.55
CXCL1-201ENST00000395761 RASIP1Q5U651 963 aa18.5■□□□□ 0.55
CXCL1-201ENST00000395761 ARL6IP4Q66PJ3 421 aaKnown RBP18.5■□□□□ 0.55
CXCL1-201ENST00000395761 POTEGQ6S5H5 508 aa18.5■□□□□ 0.55
CXCL1-201ENST00000395761 OTUD6AQ7L8S5 288 aa18.5■□□□□ 0.55
CXCL1-201ENST00000395761 HERVK_113Q902F9 699 aa18.5■□□□□ 0.55
CXCL1-201ENST00000395761 RNPC3Q96LT9 517 aaKnown RBP18.5■□□□□ 0.55
CXCL1-201ENST00000395761 USP28Q96RU2 1077 aa18.5■□□□□ 0.55
CXCL1-201ENST00000395761 PPP1R16BQ96T49 567 aa18.5■□□□□ 0.55
CXCL1-201ENST00000395761 MMTAG2Q9BU76 263 aaKnown RBP18.5■□□□□ 0.55
CXCL1-201ENST00000395761 CDHR5Q9HBB8 845 aa18.5■□□□□ 0.55
CXCL1-201ENST00000395761 ZDHHC9Q9Y397 364 aa18.5■□□□□ 0.55
CXCL1-201ENST00000395761 BMP15O95972 392 aa18.49■□□□□ 0.55
CXCL1-201ENST00000395761 VTNP04004 478 aa18.49■□□□□ 0.55
CXCL1-201ENST00000395761 RPLP2P05387 115 aaKnown RBP18.49■□□□□ 0.55
CXCL1-201ENST00000395761 PFKMP08237 780 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms