RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 ZNF185O15231 689 aa15.32■□□□□ 0.04
SNCA-204ENST00000394989 FAM13AO94988 1023 aa15.32■□□□□ 0.04
SNCA-204ENST00000394989 VCAM1P19320 739 aa15.32■□□□□ 0.04
SNCA-204ENST00000394989 OAS2P29728 719 aaKnown RBP15.32■□□□□ 0.04
SNCA-204ENST00000394989 ITGB3BPQ13352 177 aaPredicted RBP15.32■□□□□ 0.04
SNCA-204ENST00000394989 MICALL2Q8IY33 904 aa15.32■□□□□ 0.04
SNCA-204ENST00000394989 BORCS6Q96GS4 357 aa15.32■□□□□ 0.04
SNCA-204ENST00000394989 PARVGQ9HBI0 331 aa15.32■□□□□ 0.04
SNCA-204ENST00000394989 RAB21Q9UL25 225 aa15.32■□□□□ 0.04
SNCA-204ENST00000394989 PARP14Q460N5 1801 aa15.32■□□□□ 0.04
SNCA-204ENST00000394989 ANO9A1A5B4 782 aa15.32■□□□□ 0.04
SNCA-204ENST00000394989 EIF3DO15371 548 aaKnown RBP eCLIP15.32■□□□□ 0.04
SNCA-204ENST00000394989 PJA2O43164 708 aa15.32■□□□□ 0.04
SNCA-204ENST00000394989 MOCS3O95396 460 aa15.32■□□□□ 0.04
SNCA-204ENST00000394989 SERPING1P05155 500 aa15.32■□□□□ 0.04
SNCA-204ENST00000394989 RHOXF2BP0C7M4 288 aa15.32■□□□□ 0.04
SNCA-204ENST00000394989 BCRP11274 1271 aa15.32■□□□□ 0.04
SNCA-204ENST00000394989 ALAS1P13196 640 aa15.32■□□□□ 0.04
SNCA-204ENST00000394989 MTMR2Q13614 643 aa15.32■□□□□ 0.04
SNCA-204ENST00000394989 TNFAIP1Q13829 316 aa15.32■□□□□ 0.04
SNCA-204ENST00000394989 COG2Q14746 738 aa15.32■□□□□ 0.04
SNCA-204ENST00000394989 TDRD12Q587J7 1177 aaKnown RBP15.32■□□□□ 0.04
SNCA-204ENST00000394989 SLC35C1Q96A29 364 aa15.32■□□□□ 0.04
SNCA-204ENST00000394989 RHOXF2Q9BQY4 288 aa15.32■□□□□ 0.04
SNCA-204ENST00000394989 HACL1Q9UJ83 578 aa15.32■□□□□ 0.04
SNCA-204ENST00000394989 CCDC151A5D8V7 595 aa15.32■□□□□ 0.04
SNCA-204ENST00000394989 CTNND1O60716 968 aaKnown RBP15.32■□□□□ 0.04
SNCA-204ENST00000394989 AFPP02771 609 aaKnown RBP15.32■□□□□ 0.04
SNCA-204ENST00000394989 XRCC5P13010 732 aaKnown RBP15.32■□□□□ 0.04
SNCA-204ENST00000394989 GMPSP49915 693 aaPredicted RBP15.32■□□□□ 0.04
SNCA-204ENST00000394989 SLC9C1Q4G0N8 1177 aa15.32■□□□□ 0.04
SNCA-204ENST00000394989 TBC1D10BQ4KMP7 808 aaPredicted RBP15.32■□□□□ 0.04
SNCA-204ENST00000394989 ZNF720Q7Z2F6 126 aa15.32■□□□□ 0.04
SNCA-204ENST00000394989 DAW1Q8N136 415 aa15.32■□□□□ 0.04
SNCA-204ENST00000394989 SYTL5Q8TDW5 730 aaPredicted RBP15.32■□□□□ 0.04
SNCA-204ENST00000394989 WNK4Q96J92 1243 aa15.32■□□□□ 0.04
SNCA-204ENST00000394989 NUCKS1Q9H1E3 243 aaKnown RBP15.32■□□□□ 0.04
SNCA-204ENST00000394989 USO1O60763 962 aaKnown RBP15.31■□□□□ 0.04
SNCA-204ENST00000394989 PON1P27169 355 aa15.31■□□□□ 0.04
SNCA-204ENST00000394989 EPS15P42566 896 aa15.31■□□□□ 0.04
SNCA-204ENST00000394989 MAPK7Q13164 816 aa15.31■□□□□ 0.04
SNCA-204ENST00000394989 DCAF17Q5H9S7 520 aaPredicted RBP15.31■□□□□ 0.04
SNCA-204ENST00000394989 NBPF12Q5TAG4 269 aaPredicted RBP15.31■□□□□ 0.04
SNCA-204ENST00000394989 ANKRD13CQ8N6S4 541 aa15.31■□□□□ 0.04
SNCA-204ENST00000394989 FAM133AQ8N9E0 248 aa15.31■□□□□ 0.04
SNCA-204ENST00000394989 CAPZA3Q96KX2 299 aa15.31■□□□□ 0.04
SNCA-204ENST00000394989 AIPL1Q9NZN9 384 aa15.31■□□□□ 0.04
SNCA-204ENST00000394989 MYH10P35580 1976 aa15.31■□□□□ 0.04
SNCA-204ENST00000394989 MYH11P35749 1972 aa15.31■□□□□ 0.04
SNCA-204ENST00000394989 PDE2AO00408 941 aaPredicted RBP15.31■□□□□ 0.04
SNCA-204ENST00000394989 SLC16A3O15427 465 aaKnown RBP15.31■□□□□ 0.04
SNCA-204ENST00000394989 FLOT1O75955 427 aa15.31■□□□□ 0.04
SNCA-204ENST00000394989 RPS12P25398 132 aaKnown RBP15.31■□□□□ 0.04
SNCA-204ENST00000394989 MAGEA1P43355 309 aa15.31■□□□□ 0.04
SNCA-204ENST00000394989 RASSF7Q02833 373 aa15.31■□□□□ 0.04
SNCA-204ENST00000394989 TKFCQ3LXA3 575 aa15.31■□□□□ 0.04
SNCA-204ENST00000394989 TRIM58Q8NG06 486 aa15.31■□□□□ 0.04
SNCA-204ENST00000394989 FUT8Q9BYC5 575 aa15.31■□□□□ 0.04
SNCA-204ENST00000394989 ARFGAP3Q9NP61 516 aa15.31■□□□□ 0.04
SNCA-204ENST00000394989 PPP1R1BQ9UD71 204 aaPredicted RBP15.31■□□□□ 0.04
SNCA-204ENST00000394989 UBIAD1Q9Y5Z9 338 aa15.31■□□□□ 0.04
SNCA-204ENST00000394989 SPP2Q13103 211 aa15.3■□□□□ 0.04
SNCA-204ENST00000394989 RAPGEF1Q13905 1077 aa15.3■□□□□ 0.04
SNCA-204ENST00000394989 PCNX4Q63HM2 1172 aa15.3■□□□□ 0.04
SNCA-204ENST00000394989 PLCB1Q9NQ66 1216 aa15.3■□□□□ 0.04
SNCA-204ENST00000394989 AJAP1Q9UKB5 411 aaPredicted RBP15.3■□□□□ 0.04
SNCA-204ENST00000394989 PPP1R9AQ9ULJ8 1098 aa15.3■□□□□ 0.04
SNCA-204ENST00000394989 PCDHB13Q9Y5F0 798 aa15.3■□□□□ 0.04
SNCA-204ENST00000394989 LOXHD1Q8IVV2 1947 aa15.3■□□□□ 0.04
SNCA-204ENST00000394989 UCHL3P15374 230 aa15.3■□□□□ 0.04
SNCA-204ENST00000394989 RPL13P26373 211 aaKnown RBP15.3■□□□□ 0.04
SNCA-204ENST00000394989 RPS6P62753 249 aaKnown RBP15.3■□□□□ 0.04
SNCA-204ENST00000394989 VSNL1P62760 191 aa15.3■□□□□ 0.04
SNCA-204ENST00000394989 ARID5AQ03989 594 aa15.3■□□□□ 0.04
SNCA-204ENST00000394989 TAAR1Q96RJ0 339 aa15.3■□□□□ 0.04
SNCA-204ENST00000394989 AGO4Q9HCK5 861 aaKnown RBP15.3■□□□□ 0.04
SNCA-204ENST00000394989 KCND2Q9NZV8 630 aa15.3■□□□□ 0.04
SNCA-204ENST00000394989 ODF2LQ9ULJ1 636 aa15.3■□□□□ 0.04
SNCA-204ENST00000394989 FZD1Q9UP38 647 aa15.3■□□□□ 0.04
SNCA-204ENST00000394989 JRKLQ9Y4A0 524 aa15.3■□□□□ 0.04
SNCA-204ENST00000394989 DOCK1Q14185 1865 aa15.3■□□□□ 0.04
SNCA-204ENST00000394989 TULP2O00295 520 aa15.3■□□□□ 0.04
SNCA-204ENST00000394989 GUCY2CP25092 1073 aa15.3■□□□□ 0.04
SNCA-204ENST00000394989 TUBB4BP68371 445 aa15.3■□□□□ 0.04
SNCA-204ENST00000394989 BRD3Q15059 726 aa15.3■□□□□ 0.04
SNCA-204ENST00000394989 ZSCAN26Q16670 478 aa15.3■□□□□ 0.04
SNCA-204ENST00000394989 LONRF2Q1L5Z9 754 aa15.3■□□□□ 0.04
SNCA-204ENST00000394989 KLHDC7AQ5VTJ3 777 aa15.3■□□□□ 0.04
SNCA-204ENST00000394989 MCF2L2Q86YR7 1114 aa15.3■□□□□ 0.04
SNCA-204ENST00000394989 RBM46Q8TBY0 533 aaKnown RBP15.3■□□□□ 0.04
SNCA-204ENST00000394989 STRA6Q9BX79 667 aa15.3■□□□□ 0.04
SNCA-204ENST00000394989 SIX2Q9NPC8 291 aa15.3■□□□□ 0.04
SNCA-204ENST00000394989 CNOT7Q9UIV1 285 aaKnown RBP15.3■□□□□ 0.04
SNCA-204ENST00000394989 A0A087X0T9 212 aa15.29■□□□□ 0.04
SNCA-204ENST00000394989 FAM228BP0C875 321 aa15.29■□□□□ 0.04
SNCA-204ENST00000394989 EPB41P11171 864 aaKnown RBP15.29■□□□□ 0.04
SNCA-204ENST00000394989 EXOC3L4Q17RC7 722 aa15.29■□□□□ 0.04
SNCA-204ENST00000394989 NIPA1Q7RTP0 329 aa15.29■□□□□ 0.04
SNCA-204ENST00000394989 IRF2BP2Q7Z5L9 587 aa15.29■□□□□ 0.04
SNCA-204ENST00000394989 FAM178BQ8IXR5 827 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms