RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 DFFAO00273 331 aa13.11□□□□□ -0.31
SIN3A-202ENST00000394947 IMPDH2P12268 514 aa13.11□□□□□ -0.31
SIN3A-202ENST00000394947 TAF1BQ53T94 588 aaPredicted RBP13.11□□□□□ -0.31
SIN3A-202ENST00000394947 DEPDC1Q5TB30 811 aa13.11□□□□□ -0.31
SIN3A-202ENST00000394947 USP17L2Q6R6M4 530 aa13.11□□□□□ -0.31
SIN3A-202ENST00000394947 PCSK1NQ9UHG2 260 aa13.11□□□□□ -0.31
SIN3A-202ENST00000394947 RERGLQ9H628 205 aa13.11□□□□□ -0.31
SIN3A-202ENST00000394947 USP21Q9UK80 565 aa13.11□□□□□ -0.31
SIN3A-202ENST00000394947 ATP8B3O60423 1300 aa13.11□□□□□ -0.31
SIN3A-202ENST00000394947 FGAP02671 866 aa13.11□□□□□ -0.31
SIN3A-202ENST00000394947 CHRNDQ07001 517 aa13.11□□□□□ -0.31
SIN3A-202ENST00000394947 ZNF211Q13398 564 aaPredicted RBP13.11□□□□□ -0.31
SIN3A-202ENST00000394947 EFTUD2Q15029 972 aaKnown RBP eCLIP13.11□□□□□ -0.315e-6■■■■■ 40.9
SIN3A-202ENST00000394947 IL31Q6EBC2 164 aa13.11□□□□□ -0.31
SIN3A-202ENST00000394947 TTLL7Q6ZT98 887 aa13.11□□□□□ -0.31
SIN3A-202ENST00000394947 FMO2Q99518 471 aa13.11□□□□□ -0.31
SIN3A-202ENST00000394947 HAUS4Q9H6D7 363 aa13.11□□□□□ -0.31
SIN3A-202ENST00000394947 SLC52A2Q9HAB3 445 aa13.11□□□□□ -0.31
SIN3A-202ENST00000394947 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.11□□□□□ -0.31
SIN3A-202ENST00000394947 PCDHA5Q9Y5H7 936 aa13.11□□□□□ -0.31
SIN3A-202ENST00000394947 FLT4P35916 1363 aa13.11□□□□□ -0.31
SIN3A-202ENST00000394947 RIMS2Q9UQ26 1411 aa13.11□□□□□ -0.31
SIN3A-202ENST00000394947 IQANK1A0A1B0GTG1 560 aa13.11□□□□□ -0.31
SIN3A-202ENST00000394947 OSBPP22059 807 aa13.11□□□□□ -0.31
SIN3A-202ENST00000394947 MLH1P40692 756 aa13.11□□□□□ -0.31
SIN3A-202ENST00000394947 MYO1EQ12965 1108 aa13.11□□□□□ -0.31
SIN3A-202ENST00000394947 PDCLQ13371 301 aa13.11□□□□□ -0.31
SIN3A-202ENST00000394947 STXBP2Q15833 593 aa13.11□□□□□ -0.31
SIN3A-202ENST00000394947 IQCDQ96DY2 449 aa13.11□□□□□ -0.31
SIN3A-202ENST00000394947 PARD6BQ9BYG5 372 aa13.11□□□□□ -0.31
SIN3A-202ENST00000394947 SENP1Q9P0U3 644 aa13.11□□□□□ -0.31
SIN3A-202ENST00000394947 PRR23D1E9PI22 279 aaPredicted RBP13.1□□□□□ -0.31
SIN3A-202ENST00000394947 MMEP08473 750 aa13.1□□□□□ -0.31
SIN3A-202ENST00000394947 PRR23D2P0DMB1 279 aaPredicted RBP13.1□□□□□ -0.31
SIN3A-202ENST00000394947 DYNLL2Q96FJ2 89 aa13.1□□□□□ -0.31
SIN3A-202ENST00000394947 RNPEPQ9H4A4 650 aa13.1□□□□□ -0.31
SIN3A-202ENST00000394947 MYO1GB0I1T2 1018 aa13.1□□□□□ -0.31
SIN3A-202ENST00000394947 MSTO1Q9BUK6 570 aa13.1□□□□□ -0.31
SIN3A-202ENST00000394947 ZNF263O14978 683 aa13.1□□□□□ -0.31
SIN3A-202ENST00000394947 LMNAP02545 664 aaKnown RBP13.1□□□□□ -0.31
SIN3A-202ENST00000394947 AARSP49588 968 aaKnown RBP eCLIP13.1□□□□□ -0.31
SIN3A-202ENST00000394947 RUBCNLQ9H714 662 aa13.1□□□□□ -0.31
SIN3A-202ENST00000394947 ABCB6Q9NP58 842 aa13.1□□□□□ -0.31
SIN3A-202ENST00000394947 KLHL11Q9NVR0 708 aa13.1□□□□□ -0.31
SIN3A-202ENST00000394947 HSPA8P11142 646 aaKnown RBP13.1□□□□□ -0.31
SIN3A-202ENST00000394947 SH3BGRP55822 239 aaPredicted RBP13.1□□□□□ -0.31
SIN3A-202ENST00000394947 PEX3P56589 373 aa13.1□□□□□ -0.31
SIN3A-202ENST00000394947 DDX42Q86XP3 938 aaKnown RBP eCLIP13.1□□□□□ -0.31
SIN3A-202ENST00000394947 ECT2Q9H8V3 914 aa13.1□□□□□ -0.31
SIN3A-202ENST00000394947 SNX24Q9Y343 169 aa13.1□□□□□ -0.31
SIN3A-202ENST00000394947 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.1□□□□□ -0.319e-8■■■□□ 15.5
SIN3A-202ENST00000394947 ERBB3P21860 1342 aa13.1□□□□□ -0.31
SIN3A-202ENST00000394947 MEFVO15553 781 aaPredicted RBP13.1□□□□□ -0.31
SIN3A-202ENST00000394947 GFAPP14136 432 aa13.1□□□□□ -0.31
SIN3A-202ENST00000394947 ZFXP17010 805 aaPredicted RBP13.1□□□□□ -0.31
SIN3A-202ENST00000394947 IFNA8P32881 189 aa13.1□□□□□ -0.31
SIN3A-202ENST00000394947 ARHGAP18Q8N392 663 aa13.1□□□□□ -0.31
SIN3A-202ENST00000394947 RUNDC3BQ96NL0 473 aa13.1□□□□□ -0.31
SIN3A-202ENST00000394947 TMEM161AQ9NX61 479 aa13.1□□□□□ -0.31
SIN3A-202ENST00000394947 CDC23Q9UJX2 597 aa13.1□□□□□ -0.31
SIN3A-202ENST00000394947 TRAF3IP3Q9Y228 551 aa13.1□□□□□ -0.31
SIN3A-202ENST00000394947 ADCY9O60503 1353 aa13.1□□□□□ -0.31
SIN3A-202ENST00000394947 LINC00854A0A1B0GVQ3 168 aa13.1□□□□□ -0.31
SIN3A-202ENST00000394947 XPOTO43592 962 aaKnown RBP13.1□□□□□ -0.31
SIN3A-202ENST00000394947 EIF2AK2P19525 551 aaKnown RBP13.1□□□□□ -0.31
SIN3A-202ENST00000394947 KPNA2P52292 529 aaKnown RBP13.1□□□□□ -0.31
SIN3A-202ENST00000394947 COPS2P61201 443 aa13.1□□□□□ -0.31
SIN3A-202ENST00000394947 RPS8P62241 208 aaKnown RBP13.1□□□□□ -0.31
SIN3A-202ENST00000394947 ANKRD40Q6AI12 368 aa13.1□□□□□ -0.31
SIN3A-202ENST00000394947 FASTKD5Q7L8L6 764 aaKnown RBP13.1□□□□□ -0.31
SIN3A-202ENST00000394947 ERICH1Q86X53 443 aa13.1□□□□□ -0.31
SIN3A-202ENST00000394947 PAWRQ96IZ0 340 aaKnown RBP13.1□□□□□ -0.31
SIN3A-202ENST00000394947 OSBPL10Q9BXB5 764 aa13.1□□□□□ -0.31
SIN3A-202ENST00000394947 ASCC2Q9H1I8 757 aaPredicted RBP13.1□□□□□ -0.31
SIN3A-202ENST00000394947 APOBEC2Q9Y235 224 aaKnown RBP13.1□□□□□ -0.31
SIN3A-202ENST00000394947 RASA4BC9J798 803 aa13.09□□□□□ -0.31
SIN3A-202ENST00000394947 GOLGA8RI6L899 631 aa13.09□□□□□ -0.31
SIN3A-202ENST00000394947 RASA4O43374 803 aa13.09□□□□□ -0.31
SIN3A-202ENST00000394947 WDR47O94967 919 aa13.09□□□□□ -0.31
SIN3A-202ENST00000394947 FGGP02679 453 aa13.09□□□□□ -0.31
SIN3A-202ENST00000394947 ALDH18A1P54886 795 aaKnown RBP13.09□□□□□ -0.31
SIN3A-202ENST00000394947 CENPUQ71F23 418 aa13.09□□□□□ -0.31
SIN3A-202ENST00000394947 EPM2AIP1Q7L775 607 aaPredicted RBP13.09□□□□□ -0.31
SIN3A-202ENST00000394947 RRM2BQ7LG56 351 aa13.09□□□□□ -0.31
SIN3A-202ENST00000394947 TEX12Q9BXU0 123 aa13.09□□□□□ -0.31
SIN3A-202ENST00000394947 MAP3K1Q13233 1512 aa13.09□□□□□ -0.31
SIN3A-202ENST00000394947 PAMP19021 973 aa13.09□□□□□ -0.31
SIN3A-202ENST00000394947 PPP3CCP48454 512 aa13.09□□□□□ -0.31
SIN3A-202ENST00000394947 ETF1P62495 437 aaKnown RBP13.09□□□□□ -0.31
SIN3A-202ENST00000394947 NR5A1Q13285 461 aa13.09□□□□□ -0.31
SIN3A-202ENST00000394947 AOC3Q16853 763 aa13.09□□□□□ -0.31
SIN3A-202ENST00000394947 DDX53Q86TM3 631 aaKnown RBP13.09□□□□□ -0.31
SIN3A-202ENST00000394947 SRRM1Q8IYB3 904 aaKnown RBP13.09□□□□□ -0.31
SIN3A-202ENST00000394947 P2RX5Q93086 422 aa13.09□□□□□ -0.31
SIN3A-202ENST00000394947 VMP1Q96GC9 406 aa13.09□□□□□ -0.31
SIN3A-202ENST00000394947 EIF3CQ99613 913 aaKnown RBP13.09□□□□□ -0.31
SIN3A-202ENST00000394947 OSBPL1AQ9BXW6 950 aa13.09□□□□□ -0.31
SIN3A-202ENST00000394947 USE1Q9NZ43 259 aa13.09□□□□□ -0.31
SIN3A-202ENST00000394947 ATP11BQ9Y2G3 1177 aa13.09□□□□□ -0.31
SIN3A-202ENST00000394947 TNRQ92752 1358 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms