RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 NGRNQ9NPE2 291 aaKnown RBP11.17□□□□□ -0.62
COL4A6-203ENST00000394872 EPS15L1Q9UBC2 864 aa11.17□□□□□ -0.62
COL4A6-203ENST00000394872 ADGRL3Q9HAR2 1447 aa11.17□□□□□ -0.62
COL4A6-203ENST00000394872 TTI1O43156 1089 aa11.17□□□□□ -0.62
COL4A6-203ENST00000394872 HUS1O60921 280 aa11.17□□□□□ -0.62
COL4A6-203ENST00000394872 STMN1P16949 149 aa11.17□□□□□ -0.62
COL4A6-203ENST00000394872 INPP1P49441 399 aa11.17□□□□□ -0.62
COL4A6-203ENST00000394872 FASTKD5Q7L8L6 764 aaKnown RBP11.17□□□□□ -0.62
COL4A6-203ENST00000394872 BEST2Q8NFU1 509 aa11.17□□□□□ -0.62
COL4A6-203ENST00000394872 NSUN6Q8TEA1 469 aaKnown RBP11.17□□□□□ -0.62
COL4A6-203ENST00000394872 NDST4Q9H3R1 872 aa11.17□□□□□ -0.62
COL4A6-203ENST00000394872 SPTLC3Q9NUV7 552 aa11.17□□□□□ -0.62
COL4A6-203ENST00000394872 NRBP1Q9UHY1 535 aa11.17□□□□□ -0.62
COL4A6-203ENST00000394872 SCINQ9Y6U3 715 aa11.17□□□□□ -0.62
COL4A6-203ENST00000394872 PHLPP2Q6ZVD8 1323 aa11.16□□□□□ -0.62
COL4A6-203ENST00000394872 SOWAHDA6NJG2 315 aa11.16□□□□□ -0.62
COL4A6-203ENST00000394872 EPHB4P54760 987 aa11.16□□□□□ -0.62
COL4A6-203ENST00000394872 ZNF699Q32M78 642 aa11.16□□□□□ -0.62
COL4A6-203ENST00000394872 RCSD1Q6JBY9 416 aa11.16□□□□□ -0.62
COL4A6-203ENST00000394872 KLC3Q6P597 504 aa11.16□□□□□ -0.62
COL4A6-203ENST00000394872 RHPN2Q8IUC4 686 aa11.16□□□□□ -0.62
COL4A6-203ENST00000394872 MCPH1Q8NEM0 835 aa11.16□□□□□ -0.62
COL4A6-203ENST00000394872 RNF146Q9NTX7 359 aa11.16□□□□□ -0.62
COL4A6-203ENST00000394872 TBK1Q9UHD2 729 aa11.16□□□□□ -0.62
COL4A6-203ENST00000394872 ORC6Q9Y5N6 252 aa11.16□□□□□ -0.62
COL4A6-203ENST00000394872 NEDD4P46934 1319 aa11.16□□□□□ -0.62
COL4A6-203ENST00000394872 ZMYND10O75800 440 aa11.16□□□□□ -0.62
COL4A6-203ENST00000394872 CLTAP09496 248 aa11.16□□□□□ -0.62
COL4A6-203ENST00000394872 EXT2Q93063 718 aa11.16□□□□□ -0.62
COL4A6-203ENST00000394872 MAP3K4Q9Y6R4 1608 aa11.16□□□□□ -0.62
COL4A6-203ENST00000394872 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.16□□□□□ -0.62
COL4A6-203ENST00000394872 ARHGEF1Q92888 912 aaKnown RBP11.16□□□□□ -0.62
COL4A6-203ENST00000394872 TMEM47Q9BQJ4 181 aa11.16□□□□□ -0.62
COL4A6-203ENST00000394872 PTCH1Q13635 1447 aa11.16□□□□□ -0.62
COL4A6-203ENST00000394872 HMGB1P1B2RPK0 211 aaPredicted RBP11.16□□□□□ -0.62
COL4A6-203ENST00000394872 NT5C2P49902 561 aa11.16□□□□□ -0.62
COL4A6-203ENST00000394872 DHX38Q92620 1227 aaKnown RBP11.16□□□□□ -0.62
COL4A6-203ENST00000394872 TBC1D22BQ9NU19 505 aa11.16□□□□□ -0.62
COL4A6-203ENST00000394872 HACD3Q9P035 362 aa11.16□□□□□ -0.62
COL4A6-203ENST00000394872 HPCAL4Q9UM19 191 aa11.16□□□□□ -0.62
COL4A6-203ENST00000394872 HSPA6P17066 643 aa11.16□□□□□ -0.62
COL4A6-203ENST00000394872 PAMP19021 973 aa11.16□□□□□ -0.62
COL4A6-203ENST00000394872 ZBED6P86452 979 aa11.16□□□□□ -0.62
COL4A6-203ENST00000394872 FAF2Q96CS3 445 aa11.16□□□□□ -0.62
COL4A6-203ENST00000394872 DYDC2Q96IM9 177 aa11.16□□□□□ -0.62
COL4A6-203ENST00000394872 UTYO14607 1347 aa11.16□□□□□ -0.62
COL4A6-203ENST00000394872 SETSIPP0DME0 302 aa11.15□□□□□ -0.62
COL4A6-203ENST00000394872 FCER1AP12319 257 aa11.15□□□□□ -0.62
COL4A6-203ENST00000394872 PLS3P13797 630 aa11.15□□□□□ -0.62
COL4A6-203ENST00000394872 GPSM2P81274 684 aa11.15□□□□□ -0.62
COL4A6-203ENST00000394872 TRIM67Q6ZTA4 783 aa11.15□□□□□ -0.62
COL4A6-203ENST00000394872 CCDC197Q8NCU1 140 aa11.15□□□□□ -0.62
COL4A6-203ENST00000394872 AFG1LQ8WV93 481 aa11.15□□□□□ -0.62
COL4A6-203ENST00000394872 RCOR1Q9UKL0 485 aa11.15□□□□□ -0.62
COL4A6-203ENST00000394872 MROH7-TTC4A0A0A0MT08 1334 aa11.15□□□□□ -0.62
COL4A6-203ENST00000394872 ADRA2BP18089 450 aa11.15□□□□□ -0.62
COL4A6-203ENST00000394872 YWHAHQ04917 246 aaPredicted RBP11.15□□□□□ -0.62
COL4A6-203ENST00000394872 SPP2Q13103 211 aa11.15□□□□□ -0.62
COL4A6-203ENST00000394872 BBS9Q3SYG4 887 aa11.15□□□□□ -0.62
COL4A6-203ENST00000394872 ANKRD20A4Q4UJ75 823 aa11.15□□□□□ -0.62
COL4A6-203ENST00000394872 ANKRD20A8PQ5CZ79 823 aa11.15□□□□□ -0.62
COL4A6-203ENST00000394872 PPP6R3Q5H9R7 873 aaPredicted RBP11.15□□□□□ -0.62
COL4A6-203ENST00000394872 ANKRD20A2Q5SQ80 823 aa11.15□□□□□ -0.62
COL4A6-203ENST00000394872 ANKRD20A1Q5TYW2 823 aa11.15□□□□□ -0.62
COL4A6-203ENST00000394872 PADI6Q6TGC4 694 aa11.15□□□□□ -0.62
COL4A6-203ENST00000394872 ENOX1Q8TC92 643 aaKnown RBP11.15□□□□□ -0.62
COL4A6-203ENST00000394872 RABGGTAQ92696 567 aa11.15□□□□□ -0.62
COL4A6-203ENST00000394872 PIDD1Q9HB75 910 aa11.15□□□□□ -0.62
COL4A6-203ENST00000394872 NCAPD2Q15021 1401 aa11.15□□□□□ -0.62
COL4A6-203ENST00000394872 IFT43Q96FT9 208 aa11.15□□□□□ -0.62
COL4A6-203ENST00000394872 DONSONQ9NYP3 566 aa11.15□□□□□ -0.62
COL4A6-203ENST00000394872 PYCARDQ9ULZ3 195 aa11.15□□□□□ -0.62
COL4A6-203ENST00000394872 SPECC1L-ADORA2AF8WAN1 911 aa11.15□□□□□ -0.62
COL4A6-203ENST00000394872 CYP27B1O15528 508 aa11.15□□□□□ -0.62
COL4A6-203ENST00000394872 CYP2E1P05181 493 aaPredicted RBP11.15□□□□□ -0.62
COL4A6-203ENST00000394872 ZKSCAN8Q15776 578 aaPredicted RBP11.15□□□□□ -0.62
COL4A6-203ENST00000394872 FAM213AQ9BRX8 229 aa11.15□□□□□ -0.62
COL4A6-203ENST00000394872 KIAA1586Q9HCI6 787 aa11.15□□□□□ -0.62
COL4A6-203ENST00000394872 CPDO75976 1380 aa11.15□□□□□ -0.62
COL4A6-203ENST00000394872 USP17L15C9J2P7 530 aa11.15□□□□□ -0.63
COL4A6-203ENST00000394872 USP17L13C9JLJ4 530 aa11.15□□□□□ -0.63
COL4A6-203ENST00000394872 USP17L11C9JVI0 530 aa11.15□□□□□ -0.63
COL4A6-203ENST00000394872 USP17L18D6R9N7 530 aa11.15□□□□□ -0.63
COL4A6-203ENST00000394872 USP17L22D6RA61 530 aa11.15□□□□□ -0.63
COL4A6-203ENST00000394872 USP17L17D6RBQ6 530 aa11.15□□□□□ -0.63
COL4A6-203ENST00000394872 USP17L19D6RCP7 530 aa11.15□□□□□ -0.63
COL4A6-203ENST00000394872 USP17L20D6RJB6 530 aa11.15□□□□□ -0.63
COL4A6-203ENST00000394872 SLC16A4O15374 487 aa11.15□□□□□ -0.63
COL4A6-203ENST00000394872 USP17L24Q0WX57 530 aa11.15□□□□□ -0.63
COL4A6-203ENST00000394872 RESTQ13127 1097 aa11.15□□□□□ -0.63
COL4A6-203ENST00000394872 USP17L6PQ6QN14 398 aa11.15□□□□□ -0.63
COL4A6-203ENST00000394872 PASD1Q8IV76 773 aa11.15□□□□□ -0.63
COL4A6-203ENST00000394872 TEX2Q8IWB9 1127 aa11.15□□□□□ -0.63
COL4A6-203ENST00000394872 SPATA33Q96N06 139 aa11.15□□□□□ -0.63
COL4A6-203ENST00000394872 KRT76Q01546 638 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 SWSAP1Q6NVH7 229 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 FRA10AC1Q70Z53 315 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 MB21D1Q8N884 522 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 PDCD6IPQ8WUM4 868 aaKnown RBP11.14□□□□□ -0.63
COL4A6-203ENST00000394872 PPWD1Q96BP3 646 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms